RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 C4AP0C0L4 1744 aa23.19■■□□□ 1.3
CDC42EP1-203ENST00000430687 AIMP1Q12904 312 aaKnown RBP23.19■■□□□ 1.3
CDC42EP1-203ENST00000430687 DDX58O95786 925 aaKnown RBP23.18■■□□□ 1.3
CDC42EP1-203ENST00000430687 ANKRD13DQ6ZTN6 518 aa23.18■■□□□ 1.3
CDC42EP1-203ENST00000430687 PLBD2Q8NHP8 589 aa23.18■■□□□ 1.3
CDC42EP1-203ENST00000430687 SSH1Q8WYL5 1049 aa23.18■■□□□ 1.3
CDC42EP1-203ENST00000430687 BCL2L12Q9HB09 334 aa23.18■■□□□ 1.3
CDC42EP1-203ENST00000430687 ZBTB7AO95365 584 aa23.17■■□□□ 1.3
CDC42EP1-203ENST00000430687 RARSP54136 660 aaKnown RBP23.17■■□□□ 1.3
CDC42EP1-203ENST00000430687 BRPF1P55201 1214 aaPredicted RBP23.17■■□□□ 1.3
CDC42EP1-203ENST00000430687 MRPL50Q8N5N7 158 aaKnown RBP23.17■■□□□ 1.3
CDC42EP1-203ENST00000430687 FLIIQ13045 1269 aa23.16■■□□□ 1.3
CDC42EP1-203ENST00000430687 FKBP8Q14318 412 aa23.16■■□□□ 1.3
CDC42EP1-203ENST00000430687 GIGYF2Q6Y7W6 1299 aaKnown RBP23.16■■□□□ 1.3
CDC42EP1-203ENST00000430687 SPON1Q9HCB6 807 aa23.16■■□□□ 1.3
CDC42EP1-203ENST00000430687 G2E3Q7L622 706 aa23.15■■□□□ 1.3
CDC42EP1-203ENST00000430687 ZBTB3Q9H5J0 574 aa23.15■■□□□ 1.3
CDC42EP1-203ENST00000430687 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
CDC42EP1-203ENST00000430687 SCN7AQ01118 1682 aa23.14■■□□□ 1.29
CDC42EP1-203ENST00000430687 TM4SF1P30408 202 aa23.14■■□□□ 1.29
CDC42EP1-203ENST00000430687 HSP90AB3PQ58FF7 597 aa23.14■■□□□ 1.29
CDC42EP1-203ENST00000430687 HLFQ16534 295 aa23.13■■□□□ 1.29
CDC42EP1-203ENST00000430687 MSL1Q68DK7 614 aa23.13■■□□□ 1.29
CDC42EP1-203ENST00000430687 KSR2Q6VAB6 950 aa23.13■■□□□ 1.29
CDC42EP1-203ENST00000430687 RIC3Q7Z5B4 369 aa23.13■■□□□ 1.29
CDC42EP1-203ENST00000430687 ATF5Q9Y2D1 282 aaPredicted RBP23.13■■□□□ 1.29
CDC42EP1-203ENST00000430687 BCORQ6W2J9 1755 aa23.12■■□□□ 1.29
CDC42EP1-203ENST00000430687 POLD1P28340 1107 aa23.12■■□□□ 1.29
CDC42EP1-203ENST00000430687 SGIP1Q9BQI5 828 aa23.12■■□□□ 1.29
CDC42EP1-203ENST00000430687 PTPRCP08575 1304 aa23.11■■□□□ 1.29
CDC42EP1-203ENST00000430687 CACNA1FO60840 1977 aa23.11■■□□□ 1.29
CDC42EP1-203ENST00000430687 ATP10DQ9P241 1426 aa23.11■■□□□ 1.29
CDC42EP1-203ENST00000430687 FKBP5Q13451 457 aaPredicted RBP23.11■■□□□ 1.29
CDC42EP1-203ENST00000430687 TBC1D9BQ66K14 1250 aa23.11■■□□□ 1.29
CDC42EP1-203ENST00000430687 PI4KAP2A4QPH2 592 aa23.1■■□□□ 1.29
CDC42EP1-203ENST00000430687 MMP10P09238 476 aa23.1■■□□□ 1.29
CDC42EP1-203ENST00000430687 PTGER2P43116 358 aa23.1■■□□□ 1.29
CDC42EP1-203ENST00000430687 TCIRG1Q13488 830 aa23.1■■□□□ 1.29
CDC42EP1-203ENST00000430687 NFIXQ14938 502 aa23.1■■□□□ 1.29
CDC42EP1-203ENST00000430687 PI4KAP1Q8N8J0 262 aa23.1■■□□□ 1.29
CDC42EP1-203ENST00000430687 SETDB2Q96T68 719 aa23.1■■□□□ 1.29
CDC42EP1-203ENST00000430687 BCL2L13Q9BXK5 485 aa23.1■■□□□ 1.29
CDC42EP1-203ENST00000430687 COL24A1Q17RW2 1714 aa23.1■■□□□ 1.29
CDC42EP1-203ENST00000430687 KIF16BQ96L93 1317 aa23.09■■□□□ 1.29
CDC42EP1-203ENST00000430687 ZNF34Q8IZ26 560 aa23.09■■□□□ 1.29
CDC42EP1-203ENST00000430687 PARP3Q9Y6F1 533 aa23.09■■□□□ 1.29
CDC42EP1-203ENST00000430687 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.29
CDC42EP1-203ENST00000430687 NIP7Q9Y221 180 aaKnown RBP eCLIP23.08■■□□□ 1.29
CDC42EP1-203ENST00000430687 MAP3K2Q9Y2U5 619 aa23.08■■□□□ 1.29
CDC42EP1-203ENST00000430687 ADCY9O60503 1353 aa23.08■■□□□ 1.29
CDC42EP1-203ENST00000430687 CARMIL3Q8ND23 1372 aa23.07■■□□□ 1.28
CDC42EP1-203ENST00000430687 POLRMTO00411 1230 aaKnown RBP23.07■■□□□ 1.28
CDC42EP1-203ENST00000430687 TRIM28Q13263 835 aaKnown RBP23.07■■□□□ 1.28
CDC42EP1-203ENST00000430687 PARP10Q53GL7 1025 aa23.07■■□□□ 1.28
CDC42EP1-203ENST00000430687 BICDL1Q6ZP65 573 aa23.07■■□□□ 1.28
CDC42EP1-203ENST00000430687 ARHGAP45Q92619 1136 aa23.07■■□□□ 1.28
CDC42EP1-203ENST00000430687 IPO8O15397 1037 aaKnown RBP23.06■■□□□ 1.28
CDC42EP1-203ENST00000430687 BCAR3O75815 825 aa23.06■■□□□ 1.28
CDC42EP1-203ENST00000430687 DDR1Q08345 913 aa23.06■■□□□ 1.28
CDC42EP1-203ENST00000430687 DNAAF4Q8WXU2 420 aa23.06■■□□□ 1.28
CDC42EP1-203ENST00000430687 RCAN3Q9UKA8 241 aa23.06■■□□□ 1.28
CDC42EP1-203ENST00000430687 NEXNQ0ZGT2 675 aa23.05■■□□□ 1.28
CDC42EP1-203ENST00000430687 ISCA1Q9BUE6 129 aa23.05■■□□□ 1.28
CDC42EP1-203ENST00000430687 NOB1Q9ULX3 412 aaKnown RBP23.05■■□□□ 1.28
CDC42EP1-203ENST00000430687 SERPINB2P05120 415 aa23.04■■□□□ 1.28
CDC42EP1-203ENST00000430687 API5Q9BZZ5 524 aaKnown RBP23.04■■□□□ 1.28
CDC42EP1-203ENST00000430687 PPP1R42Q7Z4L9 355 aa23.03■■□□□ 1.28
CDC42EP1-203ENST00000430687 MYD88Q99836 296 aa23.03■■□□□ 1.28
CDC42EP1-203ENST00000430687 NYXQ9GZU5 481 aa23.03■■□□□ 1.28
CDC42EP1-203ENST00000430687 IBTKQ9P2D0 1353 aaPredicted RBP23.02■■□□□ 1.28
CDC42EP1-203ENST00000430687 GPTP24298 496 aa23.02■■□□□ 1.28
CDC42EP1-203ENST00000430687 TPTE2Q6XPS3 522 aa23.02■■□□□ 1.28
CDC42EP1-203ENST00000430687 NLRP10Q86W26 655 aa23.02■■□□□ 1.28
CDC42EP1-203ENST00000430687 CCDC191Q8NCU4 936 aa23.02■■□□□ 1.28
CDC42EP1-203ENST00000430687 NUP98P52948 1817 aa23.02■■□□□ 1.28
CDC42EP1-203ENST00000430687 RNF123Q5XPI4 1314 aa23.02■■□□□ 1.28
CDC42EP1-203ENST00000430687 UBN2Q6ZU65 1347 aa23.02■■□□□ 1.28
CDC42EP1-203ENST00000430687 NBPF5PQ86XG9 351 aaPredicted RBP23.01■■□□□ 1.27
CDC42EP1-203ENST00000430687 LINS1Q8NG48 757 aa23.01■■□□□ 1.27
CDC42EP1-203ENST00000430687 ARFGEF2Q9Y6D5 1785 aa23.01■■□□□ 1.27
CDC42EP1-203ENST00000430687 F6X3S4 739 aa23■■□□□ 1.27
CDC42EP1-203ENST00000430687 ATP5J2-PTCD1G3V325 749 aa23■■□□□ 1.27
CDC42EP1-203ENST00000430687 SUSD4Q5VX71 490 aa23■■□□□ 1.27
CDC42EP1-203ENST00000430687 IGKV5-2P06315 115 aa22.99■■□□□ 1.27
CDC42EP1-203ENST00000430687 BEND3Q5T5X7 828 aa22.99■■□□□ 1.27
CDC42EP1-203ENST00000430687 ZKSCAN2Q63HK3 967 aa22.99■■□□□ 1.27
CDC42EP1-203ENST00000430687 ATF7IPQ6VMQ6 1270 aa22.99■■□□□ 1.27
CDC42EP1-203ENST00000430687 FRAT1Q92837 279 aaPredicted RBP22.99■■□□□ 1.27
CDC42EP1-203ENST00000430687 UTP14AQ9BVJ6 771 aaKnown RBP22.99■■□□□ 1.27
CDC42EP1-203ENST00000430687 LRP5O75197 1615 aa22.99■■□□□ 1.27
CDC42EP1-203ENST00000430687 CNBD1Q8NA66 436 aa22.98■■□□□ 1.27
CDC42EP1-203ENST00000430687 CWC25Q9NXE8 425 aaPredicted RBP22.98■■□□□ 1.27
CDC42EP1-203ENST00000430687 PPP1R1BQ9UD71 204 aaPredicted RBP22.98■■□□□ 1.27
CDC42EP1-203ENST00000430687 ANKRD36CQ5JPF3 1778 aa22.97■■□□□ 1.27
CDC42EP1-203ENST00000430687 NEURL1BA8MQ27 555 aa22.97■■□□□ 1.27
CDC42EP1-203ENST00000430687 NPHP1O15259 732 aa22.97■■□□□ 1.27
CDC42EP1-203ENST00000430687 ALDH1L1O75891 902 aa22.97■■□□□ 1.27
CDC42EP1-203ENST00000430687 NTSR2O95665 410 aa22.97■■□□□ 1.27
CDC42EP1-203ENST00000430687 PRR5LQ6MZQ0 368 aa22.97■■□□□ 1.27
CDC42EP1-203ENST00000430687 SLC4A10Q6U841 1118 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms