RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 SRGAP3O43295 1099 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 CALM1P0DP23 149 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 CALM2P0DP24 149 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 CALM3P0DP25 149 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 NAP1L1P55209 391 aaKnown RBP6.91□□□□□ -1.3
UBR3-204ENST00000430321 VPS36Q86VN1 386 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 FMNL3Q8IVF7 1028 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 DDX12PQ92771 950 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 NCKAP5LQ9HCH0 1330 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 XPCQ01831 940 aaPredicted RBP6.91□□□□□ -1.3
UBR3-204ENST00000430321 FKBP4Q02790 459 aaKnown RBP eCLIP6.91□□□□□ -1.3
UBR3-204ENST00000430321 ELMSAN1Q6PJG2 1045 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 KRT23Q9C075 422 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 PODXL2Q9NZ53 605 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 BLOC1S2Q6QNY1 142 aa6.9□□□□□ -1.3
UBR3-204ENST00000430321 ARGLU1Q9NWB6 273 aaPredicted RBP6.9□□□□□ -1.3
UBR3-204ENST00000430321 RTL1A6NKG5 1358 aa6.9□□□□□ -1.3
UBR3-204ENST00000430321 TCOF1Q13428 1488 aaKnown RBP6.9□□□□□ -1.3
UBR3-204ENST00000430321 IDH1O75874 414 aaKnown RBP6.9□□□□□ -1.3
UBR3-204ENST00000430321 WDR78Q5VTH9 848 aa6.9□□□□□ -1.3
UBR3-204ENST00000430321 AS3MTQ9HBK9 375 aa6.9□□□□□ -1.3
UBR3-204ENST00000430321 ABCA8O94911 1581 aa6.9□□□□□ -1.3
UBR3-204ENST00000430321 PABPN1LA6NDY0 278 aaKnown RBP6.9□□□□□ -1.3
UBR3-204ENST00000430321 CCDC172P0C7W6 258 aa6.9□□□□□ -1.3
UBR3-204ENST00000430321 HMGN5P82970 282 aaKnown RBP6.9□□□□□ -1.3
UBR3-204ENST00000430321 FBXO31Q5XUX0 539 aaPredicted RBP6.9□□□□□ -1.3
UBR3-204ENST00000430321 MCTP2Q6DN12 878 aa6.9□□□□□ -1.3
UBR3-204ENST00000430321 FAM196AQ6ZSG2 479 aa6.9□□□□□ -1.3
UBR3-204ENST00000430321 CCDC117Q8IWD4 279 aaPredicted RBP6.9□□□□□ -1.3
UBR3-204ENST00000430321 CCDC82Q8N4S0 544 aa6.9□□□□□ -1.3
UBR3-204ENST00000430321 AXDND1Q5T1B0 1012 aaPredicted RBP6.9□□□□□ -1.31
UBR3-204ENST00000430321 CC2D2BQ6DHV5 1058 aa6.9□□□□□ -1.31
UBR3-204ENST00000430321 SDF4Q9BRK5 362 aa6.9□□□□□ -1.31
UBR3-204ENST00000430321 PICK1Q9NRD5 415 aa6.9□□□□□ -1.31
UBR3-204ENST00000430321 NPHP4O75161 1426 aaPredicted RBP6.9□□□□□ -1.31
UBR3-204ENST00000430321 ANKRD62A6NC57 917 aa6.9□□□□□ -1.31
UBR3-204ENST00000430321 HMG20BQ9P0W2 317 aa6.9□□□□□ -1.31
UBR3-204ENST00000430321 ABCF2Q9UG63 623 aa6.9□□□□□ -1.31
UBR3-204ENST00000430321 ZBTB24O43167 697 aaPredicted RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 HOXB7P09629 217 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 TTC6Q86TZ1 520 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 IPO9Q96P70 1041 aaKnown RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 KAT14Q9H8E8 782 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 NUP153P49790 1475 aaKnown RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 KDM5CP41229 1560 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 TMPOP42166 694 aaKnown RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 ZNF397Q8NF99 534 aaPredicted RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 NUP133Q8WUM0 1156 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 PIBF1Q8WXW3 757 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 NAP1L5Q96NT1 182 aaPredicted RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 RSPH6AQ9H0K4 717 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 SPC25Q9HBM1 224 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 THRAP3Q9Y2W1 955 aaKnown RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 DDX49Q9Y6V7 483 aaKnown RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 PLXNC1O60486 1568 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 NPATQ14207 1427 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 PTCD1O75127 700 aaKnown RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 NIM1KQ8IY84 436 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 HAUS2Q9NVX0 235 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 RTL9Q8NET4 1388 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 WDR33Q9C0J8 1336 aaKnown RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 RRS1Q15050 365 aaKnown RBP6.89□□□□□ -1.31
UBR3-204ENST00000430321 WAPLQ7Z5K2 1190 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 CNBD1Q8NA66 436 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 CCDC112Q8NEF3 446 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 TBC1D22AQ8WUA7 517 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 DEF6Q9H4E7 631 aa6.89□□□□□ -1.31
UBR3-204ENST00000430321 SMTNL1A8MU46 457 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 EZRP15311 586 aaKnown RBP6.88□□□□□ -1.31
UBR3-204ENST00000430321 CAVIN1Q6NZI2 390 aaKnown RBP6.88□□□□□ -1.31
UBR3-204ENST00000430321 GIGYF2Q6Y7W6 1299 aaKnown RBP6.88□□□□□ -1.31
UBR3-204ENST00000430321 FAM114A1Q8IWE2 563 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 CNKSR1Q969H4 720 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 KDM5DQ9BY66 1539 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 ARHGEF12Q9NZN5 1544 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 CCDC171Q6TFL3 1326 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 HACE1Q8IYU2 909 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 MSANTD4Q8NCY6 345 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 DENND2AQ9ULE3 1009 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 IL15P40933 162 aaPredicted RBP6.88□□□□□ -1.31
UBR3-204ENST00000430321 DCAF15Q66K64 600 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 IP6K1Q92551 441 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 CALML4Q96GE6 196 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 CCDC194A0A1B0GVG4 234 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 H7C1D1 291 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 EVI5LQ96CN4 794 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 BIN2Q9UBW5 565 aaPredicted RBP6.88□□□□□ -1.31
UBR3-204ENST00000430321 IVNS1ABPQ9Y6Y0 642 aa6.88□□□□□ -1.31
UBR3-204ENST00000430321 VTI1AQ96AJ9 217 aa6.87□□□□□ -1.31
UBR3-204ENST00000430321 NOB1Q9ULX3 412 aaKnown RBP6.87□□□□□ -1.31
UBR3-204ENST00000430321 MTMR7Q9Y216 660 aa6.87□□□□□ -1.31
UBR3-204ENST00000430321 RFX1P22670 979 aa6.87□□□□□ -1.31
UBR3-204ENST00000430321 KANK3Q6NY19 840 aa6.87□□□□□ -1.31
UBR3-204ENST00000430321 DZIP3Q86Y13 1208 aaKnown RBP6.87□□□□□ -1.31
UBR3-204ENST00000430321 CAGE1Q8TC20 777 aa6.87□□□□□ -1.31
UBR3-204ENST00000430321 TTC12Q9H892 705 aaPredicted RBP6.87□□□□□ -1.31
UBR3-204ENST00000430321 ARHGEF10LQ9HCE6 1279 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 2574.4 ms