RNA–Protein interactions for RNA: ENST00000430278.5

LMBR1-205, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-205ENST00000430278 NUDCQ9Y266 331 aa27.6■■■□□ 2.01
LMBR1-205ENST00000430278 LTBP3Q9NS15 1303 aa27.6■■■□□ 2.01
LMBR1-205ENST00000430278 SRGNP10124 158 aa27.59■■■□□ 2.01
LMBR1-205ENST00000430278 PIP4K2AP48426 406 aaPredicted RBP27.59■■■□□ 2.01
LMBR1-205ENST00000430278 SLX4Q8IY92 1834 aa27.59■■■□□ 2.01
LMBR1-205ENST00000430278 PRAMEF22A3QJZ6 481 aa27.58■■■□□ 2.01
LMBR1-205ENST00000430278 TAOK3Q9H2K8 898 aa27.58■■■□□ 2.01
LMBR1-205ENST00000430278 PRPF40BQ6NWY9 871 aaKnown RBP27.57■■■□□ 2
LMBR1-205ENST00000430278 CLEC4GQ6UXB4 293 aa27.57■■■□□ 2
LMBR1-205ENST00000430278 MCM10Q7L590 875 aa27.57■■■□□ 2
LMBR1-205ENST00000430278 RTF1Q92541 710 aaKnown RBP27.57■■■□□ 2
LMBR1-205ENST00000430278 MASTLQ96GX5 879 aa27.57■■■□□ 2
LMBR1-205ENST00000430278 CACNA1SQ13698 1873 aa27.57■■■□□ 2
LMBR1-205ENST00000430278 SNRPA1P09661 255 aaKnown RBP27.56■■■□□ 2
LMBR1-205ENST00000430278 U2AF1L5P0DN76 240 aaPredicted RBP27.56■■■□□ 2
LMBR1-205ENST00000430278 U2AF1Q01081 240 aaKnown RBP eCLIP27.56■■■□□ 2
LMBR1-205ENST00000430278 COL13A1Q5TAT6 717 aaPredicted RBP27.56■■■□□ 2
LMBR1-205ENST00000430278 ARFGEF2Q9Y6D5 1785 aa27.55■■■□□ 2
LMBR1-205ENST00000430278 PPP2R1AP30153 589 aa27.54■■■□□ 2
LMBR1-205ENST00000430278 SOGA3Q5TF21 947 aa27.54■■■□□ 2
LMBR1-205ENST00000430278 NBPF5PQ86XG9 351 aaPredicted RBP27.53■■■□□ 2
LMBR1-205ENST00000430278 ZNF652Q9Y2D9 606 aa27.53■■■□□ 2
LMBR1-205ENST00000430278 DDNO94850 711 aaPredicted RBP27.51■■□□□ 1.99
LMBR1-205ENST00000430278 DCTN1Q14203 1278 aa27.51■■□□□ 1.99
LMBR1-205ENST00000430278 C7orf43Q8WVR3 580 aa27.51■■□□□ 1.99
LMBR1-205ENST00000430278 NBPF26B4DH59 902 aa27.5■■□□□ 1.99
LMBR1-205ENST00000430278 HTATSF1O43719 755 aaKnown RBP27.5■■□□□ 1.99
LMBR1-205ENST00000430278 NBPF10Q6P3W6 841 aaKnown RBP27.5■■□□□ 1.99
LMBR1-205ENST00000430278 NBPF15Q8N660 670 aa27.5■■□□□ 1.99
LMBR1-205ENST00000430278 KLRG2A4D1S0 409 aaPredicted RBP27.48■■□□□ 1.99
LMBR1-205ENST00000430278 RGL2O15211 777 aa27.48■■□□□ 1.99
LMBR1-205ENST00000430278 NPR1P16066 1061 aa27.48■■□□□ 1.99
LMBR1-205ENST00000430278 CHADLQ6NUI6 762 aa27.48■■□□□ 1.99
LMBR1-205ENST00000430278 TPTE2Q6XPS3 522 aa27.48■■□□□ 1.99
LMBR1-205ENST00000430278 NIP7Q9Y221 180 aaKnown RBP eCLIP27.48■■□□□ 1.99
LMBR1-205ENST00000430278 PCNTO95613 3336 aa27.47■■□□□ 1.99
LMBR1-205ENST00000430278 POTEIP0CG38 1075 aa27.46■■□□□ 1.99
LMBR1-205ENST00000430278 POTEJP0CG39 1038 aa27.46■■□□□ 1.99
LMBR1-205ENST00000430278 TAF7Q15545 349 aaPredicted RBP27.46■■□□□ 1.99
LMBR1-205ENST00000430278 CCDC93Q567U6 631 aa27.46■■□□□ 1.99
LMBR1-205ENST00000430278 HSPA1AP0DMV8 641 aaKnown RBP27.44■■□□□ 1.98
LMBR1-205ENST00000430278 HSPA1BP0DMV9 641 aaKnown RBP27.44■■□□□ 1.98
LMBR1-205ENST00000430278 MIS18AQ9NYP9 233 aa27.43■■□□□ 1.98
LMBR1-205ENST00000430278 FAM177BA6PVY3 158 aa27.42■■□□□ 1.98
LMBR1-205ENST00000430278 FKBP4Q02790 459 aaKnown RBP eCLIP27.42■■□□□ 1.98
LMBR1-205ENST00000430278 HLFQ16534 295 aa27.42■■□□□ 1.98
LMBR1-205ENST00000430278 TNS4Q8IZW8 715 aa27.42■■□□□ 1.98
LMBR1-205ENST00000430278 L3MBTL3Q96JM7 780 aaPredicted RBP27.42■■□□□ 1.98
LMBR1-205ENST00000430278 CREBZFQ9NS37 354 aa27.42■■□□□ 1.98
LMBR1-205ENST00000430278 IQCA1LA6NCM1 817 aa27.41■■□□□ 1.98
LMBR1-205ENST00000430278 SCN4AP35499 1836 aa27.41■■□□□ 1.98
LMBR1-205ENST00000430278 OLFM4Q6UX06 510 aa27.4■■□□□ 1.98
LMBR1-205ENST00000430278 ZNF277Q9NRM2 450 aaPredicted RBP27.4■■□□□ 1.98
LMBR1-205ENST00000430278 RTKN2Q8IZC4 609 aa27.39■■□□□ 1.98
LMBR1-205ENST00000430278 LAMB4A4D0S4 1761 aa27.39■■□□□ 1.98
LMBR1-205ENST00000430278 GTF2E1P29083 439 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-205ENST00000430278 ALDH1B1P30837 517 aa27.38■■□□□ 1.97
LMBR1-205ENST00000430278 TAF1DQ9H5J8 278 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-205ENST00000430278 LDHDQ86WU2 507 aa27.37■■□□□ 1.97
LMBR1-205ENST00000430278 MKRN1Q9UHC7 482 aaKnown RBP27.37■■□□□ 1.97
LMBR1-205ENST00000430278 DLG5Q8TDM6 1919 aa27.37■■□□□ 1.97
LMBR1-205ENST00000430278 ZNF541Q9H0D2 1346 aa27.36■■□□□ 1.97
LMBR1-205ENST00000430278 CAPN15O75808 1086 aa27.35■■□□□ 1.97
LMBR1-205ENST00000430278 NEFMP07197 916 aa27.35■■□□□ 1.97
LMBR1-205ENST00000430278 NGEFQ8N5V2 710 aa27.35■■□□□ 1.97
LMBR1-205ENST00000430278 PNISRQ8TF01 805 aaKnown RBP27.35■■□□□ 1.97
LMBR1-205ENST00000430278 PASKQ96RG2 1323 aa27.35■■□□□ 1.97
LMBR1-205ENST00000430278 KDM3BQ7LBC6 1761 aa27.35■■□□□ 1.97
LMBR1-205ENST00000430278 ERVV-1B6SEH8 477 aa27.34■■□□□ 1.97
LMBR1-205ENST00000430278 NYXQ9GZU5 481 aa27.34■■□□□ 1.97
LMBR1-205ENST00000430278 NUP98P52948 1817 aa27.33■■□□□ 1.97
LMBR1-205ENST00000430278 IARSP41252 1262 aaKnown RBP27.33■■□□□ 1.97
LMBR1-205ENST00000430278 CRY2Q49AN0 593 aa27.33■■□□□ 1.97
LMBR1-205ENST00000430278 SYNE4Q8N205 404 aa27.33■■□□□ 1.97
LMBR1-205ENST00000430278 EIF4A1P60842 406 aaKnown RBP27.32■■□□□ 1.96
LMBR1-205ENST00000430278 NUTM1Q86Y26 1132 aa27.32■■□□□ 1.96
LMBR1-205ENST00000430278 HACL1Q9UJ83 578 aa27.32■■□□□ 1.96
LMBR1-205ENST00000430278 RRP7AQ9Y3A4 280 aaKnown RBP27.32■■□□□ 1.96
LMBR1-205ENST00000430278 MAP3K15Q6ZN16 1313 aa27.32■■□□□ 1.96
LMBR1-205ENST00000430278 FZD9O00144 591 aa27.31■■□□□ 1.96
LMBR1-205ENST00000430278 EAPPQ56P03 285 aaPredicted RBP27.31■■□□□ 1.96
LMBR1-205ENST00000430278 PLEKHF1Q96S99 279 aa27.31■■□□□ 1.96
LMBR1-205ENST00000430278 ABCC12Q96J65 1359 aa27.31■■□□□ 1.96
LMBR1-205ENST00000430278 ITGBL1O95965 494 aaPredicted RBP27.3■■□□□ 1.96
LMBR1-205ENST00000430278 TTLL7Q6ZT98 887 aa27.3■■□□□ 1.96
LMBR1-205ENST00000430278 SNED1Q8TER0 1413 aa27.3■■□□□ 1.96
LMBR1-205ENST00000430278 EPHX2P34913 555 aa27.29■■□□□ 1.96
LMBR1-205ENST00000430278 NFE2L2Q16236 605 aa27.29■■□□□ 1.96
LMBR1-205ENST00000430278 KIF6Q6ZMV9 814 aa27.29■■□□□ 1.96
LMBR1-205ENST00000430278 PSMD1Q99460 953 aa27.29■■□□□ 1.96
LMBR1-205ENST00000430278 CNTNAP1P78357 1384 aa27.29■■□□□ 1.96
LMBR1-205ENST00000430278 THUMPD2Q9BTF0 503 aaKnown RBP27.28■■□□□ 1.96
LMBR1-205ENST00000430278 CLEC11AQ9Y240 323 aa27.28■■□□□ 1.96
LMBR1-205ENST00000430278 RNF123Q5XPI4 1314 aa27.27■■□□□ 1.96
LMBR1-205ENST00000430278 MYL6BP14649 208 aa27.27■■□□□ 1.96
LMBR1-205ENST00000430278 HOXA10P31260 410 aaPredicted RBP27.27■■□□□ 1.96
LMBR1-205ENST00000430278 CC2D2BQ6DHV5 1058 aa27.27■■□□□ 1.96
LMBR1-205ENST00000430278 PNMA8AQ86V59 439 aaPredicted RBP27.27■■□□□ 1.96
LMBR1-205ENST00000430278 GPC2Q8N158 579 aa27.27■■□□□ 1.96
LMBR1-205ENST00000430278 ADAMTSL1Q8N6G6 1762 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms