RNA–Protein interactions for RNA: ENST00000429978.5

GTDC1-210, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 4

Gene GTDC1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-210ENST00000429978 C21orf2O43822 256 aa20.64■□□□□ 0.89
GTDC1-210ENST00000429978 PRKAR2BP31323 418 aa20.64■□□□□ 0.89
GTDC1-210ENST00000429978 DZIP3Q86Y13 1208 aaKnown RBP20.64■□□□□ 0.89
GTDC1-210ENST00000429978 ZNF652Q9Y2D9 606 aa20.64■□□□□ 0.89
GTDC1-210ENST00000429978 PCNTO95613 3336 aa20.63■□□□□ 0.89
GTDC1-210ENST00000429978 PRPF40BQ6NWY9 871 aaKnown RBP20.63■□□□□ 0.89
GTDC1-210ENST00000429978 C7orf43Q8WVR3 580 aa20.63■□□□□ 0.89
GTDC1-210ENST00000429978 L3MBTL3Q96JM7 780 aaPredicted RBP20.63■□□□□ 0.89
GTDC1-210ENST00000429978 NUDCQ9Y266 331 aa20.63■□□□□ 0.89
GTDC1-210ENST00000429978 SLX4Q8IY92 1834 aa20.62■□□□□ 0.89
GTDC1-210ENST00000429978 SNRPA1P09661 255 aaKnown RBP20.62■□□□□ 0.89
GTDC1-210ENST00000429978 COL13A1Q5TAT6 717 aaPredicted RBP20.62■□□□□ 0.89
GTDC1-210ENST00000429978 USP16Q9Y5T5 823 aa20.62■□□□□ 0.89
GTDC1-210ENST00000429978 SCN4AP35499 1836 aa20.6■□□□□ 0.89
GTDC1-210ENST00000429978 KCNQ3O43525 872 aa20.6■□□□□ 0.89
GTDC1-210ENST00000429978 CREBZFQ9NS37 354 aa20.6■□□□□ 0.89
GTDC1-210ENST00000429978 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
GTDC1-210ENST00000429978 IQCA1LA6NCM1 817 aa20.59■□□□□ 0.89
GTDC1-210ENST00000429978 NPR1P16066 1061 aa20.59■□□□□ 0.89
GTDC1-210ENST00000429978 CHADLQ6NUI6 762 aa20.59■□□□□ 0.89
GTDC1-210ENST00000429978 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
GTDC1-210ENST00000429978 NBPF5PQ86XG9 351 aaPredicted RBP20.58■□□□□ 0.89
GTDC1-210ENST00000429978 RIC1Q4ADV7 1423 aa20.58■□□□□ 0.88
GTDC1-210ENST00000429978 LAMB4A4D0S4 1761 aa20.57■□□□□ 0.88
GTDC1-210ENST00000429978 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
GTDC1-210ENST00000429978 TPTE2Q6XPS3 522 aa20.57■□□□□ 0.88
GTDC1-210ENST00000429978 SNED1Q8TER0 1413 aa20.56■□□□□ 0.88
GTDC1-210ENST00000429978 NPHP1O15259 732 aa20.56■□□□□ 0.88
GTDC1-210ENST00000429978 NBPF26B4DH59 902 aa20.55■□□□□ 0.88
GTDC1-210ENST00000429978 HSPA1AP0DMV8 641 aaKnown RBP20.55■□□□□ 0.88
GTDC1-210ENST00000429978 HSPA1BP0DMV9 641 aaKnown RBP20.55■□□□□ 0.88
GTDC1-210ENST00000429978 PPP2R1AP30153 589 aa20.55■□□□□ 0.88
GTDC1-210ENST00000429978 FKBP4Q02790 459 aaKnown RBP eCLIP20.55■□□□□ 0.88
GTDC1-210ENST00000429978 NBPF10Q6P3W6 841 aaKnown RBP20.55■□□□□ 0.88
GTDC1-210ENST00000429978 CCDC24Q8N4L8 307 aa20.55■□□□□ 0.88
GTDC1-210ENST00000429978 NBPF15Q8N660 670 aa20.55■□□□□ 0.88
GTDC1-210ENST00000429978 IBTKQ9P2D0 1353 aaPredicted RBP20.55■□□□□ 0.88
GTDC1-210ENST00000429978 PASKQ96RG2 1323 aa20.54■□□□□ 0.88
GTDC1-210ENST00000429978 DDNO94850 711 aaPredicted RBP20.54■□□□□ 0.88
GTDC1-210ENST00000429978 LDHDQ86WU2 507 aa20.54■□□□□ 0.88
GTDC1-210ENST00000429978 RTKN2Q8IZC4 609 aa20.54■□□□□ 0.88
GTDC1-210ENST00000429978 ADAMTSL1Q8N6G6 1762 aa20.54■□□□□ 0.88
GTDC1-210ENST00000429978 CACNA1SQ13698 1873 aa20.54■□□□□ 0.88
GTDC1-210ENST00000429978 PRAMEF22A3QJZ6 481 aa20.53■□□□□ 0.88
GTDC1-210ENST00000429978 ERVV-1B6SEH8 477 aa20.53■□□□□ 0.88
GTDC1-210ENST00000429978 U2AF1L5P0DN76 240 aaPredicted RBP20.53■□□□□ 0.88
GTDC1-210ENST00000429978 ALDH1B1P30837 517 aa20.53■□□□□ 0.88
GTDC1-210ENST00000429978 U2AF1Q01081 240 aaKnown RBP eCLIP20.53■□□□□ 0.88
GTDC1-210ENST00000429978 TAF7Q15545 349 aaPredicted RBP20.53■□□□□ 0.88
GTDC1-210ENST00000429978 CRY2Q49AN0 593 aa20.53■□□□□ 0.88
GTDC1-210ENST00000429978 MCM10Q7L590 875 aa20.53■□□□□ 0.88
GTDC1-210ENST00000429978 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
GTDC1-210ENST00000429978 TNS4Q8IZW8 715 aa20.52■□□□□ 0.88
GTDC1-210ENST00000429978 NIP7Q9Y221 180 aaKnown RBP eCLIP20.52■□□□□ 0.88
GTDC1-210ENST00000429978 KDM3BQ7LBC6 1761 aa20.51■□□□□ 0.87
GTDC1-210ENST00000429978 CNTNAP1P78357 1384 aa20.51■□□□□ 0.87
GTDC1-210ENST00000429978 GRIPAP1Q4V328 841 aa20.51■□□□□ 0.87
GTDC1-210ENST00000429978 PNISRQ8TF01 805 aaKnown RBP20.51■□□□□ 0.87
GTDC1-210ENST00000429978 TAF1DQ9H5J8 278 aaPredicted RBP20.51■□□□□ 0.87
GTDC1-210ENST00000429978 FZD9O00144 591 aa20.5■□□□□ 0.87
GTDC1-210ENST00000429978 CC2D2BQ6DHV5 1058 aa20.5■□□□□ 0.87
GTDC1-210ENST00000429978 PSMD1Q99460 953 aa20.5■□□□□ 0.87
GTDC1-210ENST00000429978 NYXQ9GZU5 481 aa20.5■□□□□ 0.87
GTDC1-210ENST00000429978 POTEIP0CG38 1075 aa20.49■□□□□ 0.87
GTDC1-210ENST00000429978 POTEJP0CG39 1038 aa20.49■□□□□ 0.87
GTDC1-210ENST00000429978 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
GTDC1-210ENST00000429978 PNMA8AQ86V59 439 aaPredicted RBP20.48■□□□□ 0.87
GTDC1-210ENST00000429978 ITGBL1O95965 494 aaPredicted RBP20.47■□□□□ 0.87
GTDC1-210ENST00000429978 HOXA10P31260 410 aaPredicted RBP20.47■□□□□ 0.87
GTDC1-210ENST00000429978 ERBB4Q15303 1308 aa20.47■□□□□ 0.87
GTDC1-210ENST00000429978 IARSP41252 1262 aaKnown RBP20.46■□□□□ 0.87
GTDC1-210ENST00000429978 HLFQ16534 295 aa20.46■□□□□ 0.87
GTDC1-210ENST00000429978 GPC2Q8N158 579 aa20.46■□□□□ 0.87
GTDC1-210ENST00000429978 HACL1Q9UJ83 578 aa20.46■□□□□ 0.87
GTDC1-210ENST00000429978 MAP3K15Q6ZN16 1313 aa20.46■□□□□ 0.87
GTDC1-210ENST00000429978 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
GTDC1-210ENST00000429978 ZNF541Q9H0D2 1346 aa20.45■□□□□ 0.86
GTDC1-210ENST00000429978 TMEM88BA6NKF7 163 aa20.44■□□□□ 0.86
GTDC1-210ENST00000429978 PLEKHF1Q96S99 279 aa20.44■□□□□ 0.86
GTDC1-210ENST00000429978 ZNF277Q9NRM2 450 aaPredicted RBP20.44■□□□□ 0.86
GTDC1-210ENST00000429978 ABCC12Q96J65 1359 aa20.44■□□□□ 0.86
GTDC1-210ENST00000429978 NUP98P52948 1817 aa20.43■□□□□ 0.86
GTDC1-210ENST00000429978 NEFMP07197 916 aa20.43■□□□□ 0.86
GTDC1-210ENST00000429978 EPHX2P34913 555 aa20.43■□□□□ 0.86
GTDC1-210ENST00000429978 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
GTDC1-210ENST00000429978 PRDM10Q9NQV6 1147 aa20.43■□□□□ 0.86
GTDC1-210ENST00000429978 DLG5Q8TDM6 1919 aa20.43■□□□□ 0.86
GTDC1-210ENST00000429978 CNGB1Q14028 1251 aaPredicted RBP20.42■□□□□ 0.86
GTDC1-210ENST00000429978 SYNE4Q8N205 404 aa20.42■□□□□ 0.86
GTDC1-210ENST00000429978 GTF2E1P29083 439 aaPredicted RBP20.41■□□□□ 0.86
GTDC1-210ENST00000429978 CRAMP1Q96RY5 1269 aa20.41■□□□□ 0.86
GTDC1-210ENST00000429978 VPS33BQ9H267 617 aa20.41■□□□□ 0.86
GTDC1-210ENST00000429978 PNNQ9H307 717 aaKnown RBP20.41■□□□□ 0.86
GTDC1-210ENST00000429978 MKRN1Q9UHC7 482 aaKnown RBP20.41■□□□□ 0.86
GTDC1-210ENST00000429978 RASSF10A6NK89 507 aa20.4■□□□□ 0.86
GTDC1-210ENST00000429978 NFE2L2Q16236 605 aa20.4■□□□□ 0.86
GTDC1-210ENST00000429978 KIF6Q6ZMV9 814 aa20.4■□□□□ 0.86
GTDC1-210ENST00000429978 ZNF34Q8IZ26 560 aa20.4■□□□□ 0.86
GTDC1-210ENST00000429978 JDP2Q8WYK2 163 aa20.4■□□□□ 0.86
GTDC1-210ENST00000429978 RNF123Q5XPI4 1314 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms