RNA–Protein interactions for RNA: ENST00000429602.6

SIMC1-203, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-203ENST00000429602 LMO7Q8WWI1 1683 aa24.27■■□□□ 1.48
SIMC1-203ENST00000429602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.27■■□□□ 1.48
SIMC1-203ENST00000429602 IFIT2P09913 472 aaKnown RBP24.26■■□□□ 1.47
SIMC1-203ENST00000429602 PTH1RQ03431 593 aa24.26■■□□□ 1.47
SIMC1-203ENST00000429602 RUFY3Q7L099 469 aa24.26■■□□□ 1.47
SIMC1-203ENST00000429602 SUCLG2Q96I99 432 aa24.26■■□□□ 1.47
SIMC1-203ENST00000429602 GADD45BO75293 160 aaPredicted RBP24.25■■□□□ 1.47
SIMC1-203ENST00000429602 AACSQ86V21 672 aa24.25■■□□□ 1.47
SIMC1-203ENST00000429602 HEG1Q9ULI3 1381 aa24.25■■□□□ 1.47
SIMC1-203ENST00000429602 WDR33Q9C0J8 1336 aaKnown RBP24.25■■□□□ 1.47
SIMC1-203ENST00000429602 CASTP20810 708 aaKnown RBP24.25■■□□□ 1.47
SIMC1-203ENST00000429602 SLC39A6Q13433 755 aa24.25■■□□□ 1.47
SIMC1-203ENST00000429602 RNF214Q8ND24 703 aa24.25■■□□□ 1.47
SIMC1-203ENST00000429602 KAZALD1Q96I82 304 aa24.25■■□□□ 1.47
SIMC1-203ENST00000429602 NCAPD2Q15021 1401 aa24.24■■□□□ 1.47
SIMC1-203ENST00000429602 ZC3H6P61129 1189 aaKnown RBP24.24■■□□□ 1.47
SIMC1-203ENST00000429602 RPAP1Q9BWH6 1393 aaPredicted RBP24.24■■□□□ 1.47
SIMC1-203ENST00000429602 BICC1Q9H694 974 aaKnown RBP24.24■■□□□ 1.47
SIMC1-203ENST00000429602 HYPKQ9NX55 129 aa24.24■■□□□ 1.47
SIMC1-203ENST00000429602 GRM8O00222 908 aa24.23■■□□□ 1.47
SIMC1-203ENST00000429602 ZSCAN30Q86W11 494 aa24.23■■□□□ 1.47
SIMC1-203ENST00000429602 LINS1Q8NG48 757 aa24.23■■□□□ 1.47
SIMC1-203ENST00000429602 TPRNQ4KMQ1 711 aa24.23■■□□□ 1.47
SIMC1-203ENST00000429602 DDX54Q8TDD1 881 aaKnown RBP24.23■■□□□ 1.47
SIMC1-203ENST00000429602 ADCK5Q3MIX3 580 aa24.22■■□□□ 1.47
SIMC1-203ENST00000429602 PRPF40BQ6NWY9 871 aaKnown RBP24.22■■□□□ 1.47
SIMC1-203ENST00000429602 KRT28Q7Z3Y7 464 aa24.22■■□□□ 1.47
SIMC1-203ENST00000429602 USP48Q86UV5 1035 aa24.22■■□□□ 1.47
SIMC1-203ENST00000429602 LIMCH1Q9UPQ0 1083 aa24.22■■□□□ 1.47
SIMC1-203ENST00000429602 LARGE1O95461 756 aa24.22■■□□□ 1.47
SIMC1-203ENST00000429602 GPATCH3Q96I76 525 aa24.22■■□□□ 1.47
SIMC1-203ENST00000429602 ERC1Q8IUD2 1116 aa24.21■■□□□ 1.47
SIMC1-203ENST00000429602 SIL1Q9H173 461 aa24.21■■□□□ 1.47
SIMC1-203ENST00000429602 SASH1O94885 1247 aa24.21■■□□□ 1.47
SIMC1-203ENST00000429602 PDIA6Q15084 440 aa24.21■■□□□ 1.47
SIMC1-203ENST00000429602 RUFY2Q8WXA3 655 aa24.21■■□□□ 1.47
SIMC1-203ENST00000429602 CCDC8Q9H0W5 538 aaPredicted RBP24.21■■□□□ 1.47
SIMC1-203ENST00000429602 DDX21Q9NR30 783 aaKnown RBP eCLIP24.21■■□□□ 1.47
SIMC1-203ENST00000429602 PHRF1Q9P1Y6 1649 aaKnown RBP24.2■■□□□ 1.47
SIMC1-203ENST00000429602 MYL6BP14649 208 aa24.2■■□□□ 1.47
SIMC1-203ENST00000429602 EAF2Q96CJ1 260 aaPredicted RBP24.2■■□□□ 1.47
SIMC1-203ENST00000429602 JAKMIP1Q96N16 626 aaKnown RBP24.2■■□□□ 1.47
SIMC1-203ENST00000429602 KLHDC4Q8TBB5 520 aa24.2■■□□□ 1.46
SIMC1-203ENST00000429602 PDLIM2Q96JY6 352 aa24.19■■□□□ 1.46
SIMC1-203ENST00000429602 TLR7Q9NYK1 1049 aaKnown RBP24.19■■□□□ 1.46
SIMC1-203ENST00000429602 DDX58O95786 925 aaKnown RBP24.19■■□□□ 1.46
SIMC1-203ENST00000429602 SLIT3O75094 1523 aa24.19■■□□□ 1.46
SIMC1-203ENST00000429602 ERBB3P21860 1342 aa24.18■■□□□ 1.46
SIMC1-203ENST00000429602 IGKV5-2P06315 115 aa24.18■■□□□ 1.46
SIMC1-203ENST00000429602 RIC3Q7Z5B4 369 aa24.18■■□□□ 1.46
SIMC1-203ENST00000429602 FAM227BQ96M60 508 aa24.18■■□□□ 1.46
SIMC1-203ENST00000429602 OVOS2A0A0G2JMS6 1433 aa24.18■■□□□ 1.46
SIMC1-203ENST00000429602 SYT1P21579 422 aa24.18■■□□□ 1.46
SIMC1-203ENST00000429602 G3BP1Q13283 466 aaKnown RBP eCLIP24.18■■□□□ 1.46
SIMC1-203ENST00000429602 EVI5LQ96CN4 794 aa24.18■■□□□ 1.46
SIMC1-203ENST00000429602 CNPY2Q9Y2B0 182 aa24.18■■□□□ 1.46
SIMC1-203ENST00000429602 SMC3Q9UQE7 1217 aa24.18■■□□□ 1.46
SIMC1-203ENST00000429602 NPHP4O75161 1426 aaPredicted RBP24.17■■□□□ 1.46
SIMC1-203ENST00000429602 ZSCAN22P10073 491 aaPredicted RBP24.17■■□□□ 1.46
SIMC1-203ENST00000429602 MSNP26038 577 aaKnown RBP24.17■■□□□ 1.46
SIMC1-203ENST00000429602 ZNF790Q6PG37 636 aa24.17■■□□□ 1.46
SIMC1-203ENST00000429602 CCDC83Q8IWF9 413 aa24.17■■□□□ 1.46
SIMC1-203ENST00000429602 NLRP2Q9NX02 1062 aa24.17■■□□□ 1.46
SIMC1-203ENST00000429602 HDAC5Q9UQL6 1122 aa24.17■■□□□ 1.46
SIMC1-203ENST00000429602 STX6O43752 255 aa24.16■■□□□ 1.46
SIMC1-203ENST00000429602 PDRG1Q9NUG6 133 aa24.16■■□□□ 1.46
SIMC1-203ENST00000429602 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.16■■□□□ 1.46
SIMC1-203ENST00000429602 PIP4K2AP48426 406 aaPredicted RBP24.16■■□□□ 1.46
SIMC1-203ENST00000429602 NFATC2IPQ8NCF5 419 aa24.16■■□□□ 1.46
SIMC1-203ENST00000429602 RAPGEF4Q8WZA2 1011 aa24.16■■□□□ 1.46
SIMC1-203ENST00000429602 PROSER2Q86WR7 435 aaPredicted RBP24.15■■□□□ 1.46
SIMC1-203ENST00000429602 BOLA2Q9H3K6 86 aa24.15■■□□□ 1.46
SIMC1-203ENST00000429602 CRYBG1Q9Y4K1 1723 aa24.15■■□□□ 1.46
SIMC1-203ENST00000429602 CCDC171Q6TFL3 1326 aa24.15■■□□□ 1.46
SIMC1-203ENST00000429602 NMIQ13287 307 aaPredicted RBP24.15■■□□□ 1.46
SIMC1-203ENST00000429602 COL9A3Q14050 684 aaPredicted RBP24.15■■□□□ 1.46
SIMC1-203ENST00000429602 XAGE3Q8WTP9 111 aa24.15■■□□□ 1.46
SIMC1-203ENST00000429602 JARID2Q92833 1246 aaPredicted RBP24.15■■□□□ 1.46
SIMC1-203ENST00000429602 SYAP1Q96A49 352 aaPredicted RBP24.15■■□□□ 1.46
SIMC1-203ENST00000429602 UTYO14607 1347 aa24.14■■□□□ 1.46
SIMC1-203ENST00000429602 TSPY26PQ9H489 355 aa24.14■■□□□ 1.46
SIMC1-203ENST00000429602 KCNJ4P48050 445 aa24.14■■□□□ 1.45
SIMC1-203ENST00000429602 EPHA10Q5JZY3 1008 aa24.14■■□□□ 1.45
SIMC1-203ENST00000429602 DDX17Q92841 729 aaKnown RBP24.14■■□□□ 1.45
SIMC1-203ENST00000429602 RBM8AQ9Y5S9 174 aaKnown RBP24.14■■□□□ 1.45
SIMC1-203ENST00000429602 NECTIN1Q15223 517 aa24.13■■□□□ 1.45
SIMC1-203ENST00000429602 COPS6Q7L5N1 327 aa24.13■■□□□ 1.45
SIMC1-203ENST00000429602 CYP46A1Q9Y6A2 500 aa24.13■■□□□ 1.45
SIMC1-203ENST00000429602 SLC52A2Q9HAB3 445 aa24.13■■□□□ 1.45
SIMC1-203ENST00000429602 ZSWIM6Q9HCJ5 1215 aa24.13■■□□□ 1.45
SIMC1-203ENST00000429602 NPHP3Q7Z494 1330 aa24.13■■□□□ 1.45
SIMC1-203ENST00000429602 GJB2P29033 226 aa24.12■■□□□ 1.45
SIMC1-203ENST00000429602 VPS53Q5VIR6 699 aa24.12■■□□□ 1.45
SIMC1-203ENST00000429602 MYD88Q99836 296 aa24.12■■□□□ 1.45
SIMC1-203ENST00000429602 NEURL1BA8MQ27 555 aa24.12■■□□□ 1.45
SIMC1-203ENST00000429602 FIBPO43427 364 aa24.12■■□□□ 1.45
SIMC1-203ENST00000429602 LARP1Q6PKG0 1096 aaKnown RBP24.12■■□□□ 1.45
SIMC1-203ENST00000429602 ZNF496Q96IT1 587 aaPredicted RBP24.12■■□□□ 1.45
SIMC1-203ENST00000429602 F13A1P00488 732 aa24.11■■□□□ 1.45
SIMC1-203ENST00000429602 CREB3L3Q68CJ9 461 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms