RNA–Protein interactions for RNA: ENST00000429574.1

LIN28AP1-201, Transcript of LIN28A pseudogene 1, humanhuman

BASIC

Gene LIN28AP1, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AP1-201ENST00000429574 NBPF26B4DH59 902 aa24.76■■□□□ 1.55
LIN28AP1-201ENST00000429574 NBPF10Q6P3W6 841 aaKnown RBP24.76■■□□□ 1.55
LIN28AP1-201ENST00000429574 NBPF15Q8N660 670 aa24.76■■□□□ 1.55
LIN28AP1-201ENST00000429574 CNKSR1Q969H4 720 aa24.76■■□□□ 1.55
LIN28AP1-201ENST00000429574 ZNF219Q9P2Y4 722 aaPredicted RBP24.76■■□□□ 1.55
LIN28AP1-201ENST00000429574 LAMB4A4D0S4 1761 aa24.75■■□□□ 1.55
LIN28AP1-201ENST00000429574 FAM177BA6PVY3 158 aa24.75■■□□□ 1.55
LIN28AP1-201ENST00000429574 KIF3CO14782 793 aa24.75■■□□□ 1.55
LIN28AP1-201ENST00000429574 LMNB1P20700 586 aa24.75■■□□□ 1.55
LIN28AP1-201ENST00000429574 RASSF7Q02833 373 aa24.75■■□□□ 1.55
LIN28AP1-201ENST00000429574 NEUROD2Q15784 382 aa24.75■■□□□ 1.55
LIN28AP1-201ENST00000429574 KDM3BQ7LBC6 1761 aa24.75■■□□□ 1.55
LIN28AP1-201ENST00000429574 RGL2O15211 777 aa24.74■■□□□ 1.55
LIN28AP1-201ENST00000429574 MYL6BP14649 208 aa24.74■■□□□ 1.55
LIN28AP1-201ENST00000429574 SBF1O95248 1867 aa24.73■■□□□ 1.55
LIN28AP1-201ENST00000429574 ANKRD31Q8N7Z5 1873 aa24.73■■□□□ 1.55
LIN28AP1-201ENST00000429574 TMPOP42166 694 aaKnown RBP24.73■■□□□ 1.55
LIN28AP1-201ENST00000429574 CCDC146Q8IYE0 955 aa24.73■■□□□ 1.55
LIN28AP1-201ENST00000429574 MASTLQ96GX5 879 aa24.73■■□□□ 1.55
LIN28AP1-201ENST00000429574 C21orf2O43822 256 aa24.72■■□□□ 1.55
LIN28AP1-201ENST00000429574 TOMM70O94826 608 aa24.72■■□□□ 1.55
LIN28AP1-201ENST00000429574 STYK1Q6J9G0 422 aa24.72■■□□□ 1.55
LIN28AP1-201ENST00000429574 NMRK2Q9NPI5 230 aa24.72■■□□□ 1.55
LIN28AP1-201ENST00000429574 HSPA6P17066 643 aa24.71■■□□□ 1.55
LIN28AP1-201ENST00000429574 RUNDC1Q96C34 613 aa24.71■■□□□ 1.55
LIN28AP1-201ENST00000429574 BABAM1Q9NWV8 329 aa24.71■■□□□ 1.55
LIN28AP1-201ENST00000429574 ZC3H4Q9UPT8 1303 aaKnown RBP24.7■■□□□ 1.54
LIN28AP1-201ENST00000429574 SOGA3Q5TF21 947 aa24.7■■□□□ 1.54
LIN28AP1-201ENST00000429574 NYXQ9GZU5 481 aa24.7■■□□□ 1.54
LIN28AP1-201ENST00000429574 ERVV-1B6SEH8 477 aa24.69■■□□□ 1.54
LIN28AP1-201ENST00000429574 SRGNP10124 158 aa24.69■■□□□ 1.54
LIN28AP1-201ENST00000429574 EIF2S2P20042 333 aaKnown RBP24.69■■□□□ 1.54
LIN28AP1-201ENST00000429574 HLFQ16534 295 aa24.69■■□□□ 1.54
LIN28AP1-201ENST00000429574 LAS1LQ9Y4W2 734 aaKnown RBP24.69■■□□□ 1.54
LIN28AP1-201ENST00000429574 CCDC88AQ3V6T2 1871 aa24.68■■□□□ 1.54
LIN28AP1-201ENST00000429574 RRAGCQ9HB90 399 aa24.68■■□□□ 1.54
LIN28AP1-201ENST00000429574 ERBB4Q15303 1308 aa24.67■■□□□ 1.54
LIN28AP1-201ENST00000429574 MAP3K15Q6ZN16 1313 aa24.67■■□□□ 1.54
LIN28AP1-201ENST00000429574 CACNA1SQ13698 1873 aa24.67■■□□□ 1.54
LIN28AP1-201ENST00000429574 NPR1P16066 1061 aa24.67■■□□□ 1.54
LIN28AP1-201ENST00000429574 PRPF40BQ6NWY9 871 aaKnown RBP24.67■■□□□ 1.54
LIN28AP1-201ENST00000429574 DPY19L2Q6NUT2 758 aa24.66■■□□□ 1.54
LIN28AP1-201ENST00000429574 ZBTB3Q9H5J0 574 aa24.66■■□□□ 1.54
LIN28AP1-201ENST00000429574 COL11A2P13942 1736 aaPredicted RBP24.65■■□□□ 1.54
LIN28AP1-201ENST00000429574 TAOK3Q9H2K8 898 aa24.65■■□□□ 1.54
LIN28AP1-201ENST00000429574 PRKRIP1Q9H875 184 aaPredicted RBP24.65■■□□□ 1.54
LIN28AP1-201ENST00000429574 NFKBIEO00221 500 aa24.64■■□□□ 1.54
LIN28AP1-201ENST00000429574 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.54
LIN28AP1-201ENST00000429574 ERFEQ4G0M1 354 aa24.64■■□□□ 1.54
LIN28AP1-201ENST00000429574 TTLL7Q6ZT98 887 aa24.64■■□□□ 1.54
LIN28AP1-201ENST00000429574 ADAMTS8Q9UP79 889 aa24.64■■□□□ 1.54
LIN28AP1-201ENST00000429574 NUP98P52948 1817 aa24.63■■□□□ 1.53
LIN28AP1-201ENST00000429574 ALDH1B1P30837 517 aa24.63■■□□□ 1.53
LIN28AP1-201ENST00000429574 GLTPD2A6NH11 291 aa24.62■■□□□ 1.53
LIN28AP1-201ENST00000429574 GPTP24298 496 aa24.62■■□□□ 1.53
LIN28AP1-201ENST00000429574 RBM46Q8TBY0 533 aaKnown RBP24.62■■□□□ 1.53
LIN28AP1-201ENST00000429574 APLP1P51693 650 aa24.61■■□□□ 1.53
LIN28AP1-201ENST00000429574 TNRC6CQ9HCJ0 1690 aaKnown RBP24.61■■□□□ 1.53
LIN28AP1-201ENST00000429574 SLX4Q8IY92 1834 aa24.61■■□□□ 1.53
LIN28AP1-201ENST00000429574 VEGFAP15692 232 aaPredicted RBP24.6■■□□□ 1.53
LIN28AP1-201ENST00000429574 CCDC93Q567U6 631 aa24.6■■□□□ 1.53
LIN28AP1-201ENST00000429574 PPP1R42Q7Z4L9 355 aa24.6■■□□□ 1.53
LIN28AP1-201ENST00000429574 NECTIN2Q92692 538 aa24.6■■□□□ 1.53
LIN28AP1-201ENST00000429574 NUTM1Q86Y26 1132 aa24.59■■□□□ 1.53
LIN28AP1-201ENST00000429574 RPGRQ92834 1020 aaKnown RBP24.59■■□□□ 1.53
LIN28AP1-201ENST00000429574 FER1L6Q2WGJ9 1857 aa24.59■■□□□ 1.53
LIN28AP1-201ENST00000429574 TIAM2Q8IVF5 1701 aa24.58■■□□□ 1.53
LIN28AP1-201ENST00000429574 ARFGEF2Q9Y6D5 1785 aa24.58■■□□□ 1.53
LIN28AP1-201ENST00000429574 FSTL1Q12841 308 aa24.58■■□□□ 1.53
LIN28AP1-201ENST00000429574 GIGYF2Q6Y7W6 1299 aaKnown RBP24.58■■□□□ 1.53
LIN28AP1-201ENST00000429574 LTBP3Q9NS15 1303 aa24.58■■□□□ 1.52
LIN28AP1-201ENST00000429574 KLRG2A4D1S0 409 aaPredicted RBP24.57■■□□□ 1.52
LIN28AP1-201ENST00000429574 PRELPP51888 382 aa24.57■■□□□ 1.52
LIN28AP1-201ENST00000429574 AIMP1Q12904 312 aaKnown RBP24.57■■□□□ 1.52
LIN28AP1-201ENST00000429574 PARP10Q53GL7 1025 aa24.57■■□□□ 1.52
LIN28AP1-201ENST00000429574 CHL1O00533 1208 aa24.56■■□□□ 1.52
LIN28AP1-201ENST00000429574 RTKN2Q8IZC4 609 aa24.56■■□□□ 1.52
LIN28AP1-201ENST00000429574 TRIM35Q9UPQ4 493 aa24.56■■□□□ 1.52
LIN28AP1-201ENST00000429574 DICER1Q9UPY3 1922 aaKnown RBP24.55■■□□□ 1.52
LIN28AP1-201ENST00000429574 HSP90AB3PQ58FF7 597 aa24.55■■□□□ 1.52
LIN28AP1-201ENST00000429574 SUSD4Q5VX71 490 aa24.55■■□□□ 1.52
LIN28AP1-201ENST00000429574 SMC1BQ8NDV3 1235 aa24.55■■□□□ 1.52
LIN28AP1-201ENST00000429574 TMX4Q9H1E5 349 aaPredicted RBP24.55■■□□□ 1.52
LIN28AP1-201ENST00000429574 ANXA1P04083 346 aa24.54■■□□□ 1.52
LIN28AP1-201ENST00000429574 CALD1Q05682 793 aaKnown RBP24.54■■□□□ 1.52
LIN28AP1-201ENST00000429574 ZNF34Q8IZ26 560 aa24.54■■□□□ 1.52
LIN28AP1-201ENST00000429574 COPS6Q7L5N1 327 aa24.53■■□□□ 1.52
LIN28AP1-201ENST00000429574 RBM17Q96I25 401 aaKnown RBP24.53■■□□□ 1.52
LIN28AP1-201ENST00000429574 UTP14AQ9BVJ6 771 aaKnown RBP24.53■■□□□ 1.52
LIN28AP1-201ENST00000429574 FKBP4Q02790 459 aaKnown RBP eCLIP24.52■■□□□ 1.52
LIN28AP1-201ENST00000429574 PDIA6Q15084 440 aa24.52■■□□□ 1.52
LIN28AP1-201ENST00000429574 HDGFL1Q5TGJ6 251 aa24.52■■□□□ 1.52
LIN28AP1-201ENST00000429574 XAGE3Q8WTP9 111 aa24.52■■□□□ 1.52
LIN28AP1-201ENST00000429574 CFAP44Q96MT7 982 aa24.52■■□□□ 1.52
LIN28AP1-201ENST00000429574 NLRP3Q96P20 1036 aa24.52■■□□□ 1.52
LIN28AP1-201ENST00000429574 DDX21Q9NR30 783 aaKnown RBP eCLIP24.52■■□□□ 1.52
LIN28AP1-201ENST00000429574 UBN2Q6ZU65 1347 aa24.52■■□□□ 1.52
LIN28AP1-201ENST00000429574 IBTKQ9P2D0 1353 aaPredicted RBP24.52■■□□□ 1.52
LIN28AP1-201ENST00000429574 PROSER3Q2NL68 480 aa24.51■■□□□ 1.51
LIN28AP1-201ENST00000429574 APAF1O14727 1248 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms