RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 TTC5Q8N0Z6 440 aa12.1□□□□□ -0.47
NEDD1-203ENST00000429527 CACNA1FO60840 1977 aa12.1□□□□□ -0.47
NEDD1-203ENST00000429527 SNRPA1P09661 255 aaKnown RBP12.1□□□□□ -0.47
NEDD1-203ENST00000429527 TMPOP42166 694 aaKnown RBP12.1□□□□□ -0.47
NEDD1-203ENST00000429527 RTF1Q92541 710 aaKnown RBP12.1□□□□□ -0.47
NEDD1-203ENST00000429527 FER1L6Q2WGJ9 1857 aa12.09□□□□□ -0.47
NEDD1-203ENST00000429527 POLRMTO00411 1230 aaKnown RBP12.09□□□□□ -0.47
NEDD1-203ENST00000429527 ZNF853P0CG23 659 aa12.09□□□□□ -0.47
NEDD1-203ENST00000429527 EIF4A1P60842 406 aaKnown RBP12.09□□□□□ -0.47
NEDD1-203ENST00000429527 CLEC4GQ6UXB4 293 aa12.09□□□□□ -0.47
NEDD1-203ENST00000429527 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
NEDD1-203ENST00000429527 SBF1O95248 1867 aa12.09□□□□□ -0.47
NEDD1-203ENST00000429527 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.47
NEDD1-203ENST00000429527 SLC39A6Q13433 755 aa12.08□□□□□ -0.48
NEDD1-203ENST00000429527 LRP10Q7Z4F1 713 aa12.08□□□□□ -0.48
NEDD1-203ENST00000429527 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
NEDD1-203ENST00000429527 CHL1O00533 1208 aa12.08□□□□□ -0.48
NEDD1-203ENST00000429527 IGHDP01880 384 aa12.08□□□□□ -0.48
NEDD1-203ENST00000429527 ZBTB1Q9Y2K1 713 aa12.08□□□□□ -0.48
NEDD1-203ENST00000429527 RFC4P35249 363 aa12.07□□□□□ -0.48
NEDD1-203ENST00000429527 GRIN3BO60391 1043 aa12.07□□□□□ -0.48
NEDD1-203ENST00000429527 CAMTA2O94983 1202 aa12.07□□□□□ -0.48
NEDD1-203ENST00000429527 TBC1D32Q96NH3 1257 aa12.07□□□□□ -0.48
NEDD1-203ENST00000429527 KLRG2A4D1S0 409 aaPredicted RBP12.07□□□□□ -0.48
NEDD1-203ENST00000429527 ERVV-1B6SEH8 477 aa12.07□□□□□ -0.48
NEDD1-203ENST00000429527 APAF1O14727 1248 aa12.07□□□□□ -0.48
NEDD1-203ENST00000429527 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
NEDD1-203ENST00000429527 DDR1Q08345 913 aa12.07□□□□□ -0.48
NEDD1-203ENST00000429527 TNRC6CQ9HCJ0 1690 aaKnown RBP12.07□□□□□ -0.48
NEDD1-203ENST00000429527 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
NEDD1-203ENST00000429527 CARMIL3Q8ND23 1372 aa12.06□□□□□ -0.48
NEDD1-203ENST00000429527 HDAC1Q13547 482 aaPredicted RBP12.06□□□□□ -0.48
NEDD1-203ENST00000429527 MCM10Q7L590 875 aa12.06□□□□□ -0.48
NEDD1-203ENST00000429527 TIAM2Q8IVF5 1701 aa12.05□□□□□ -0.48
NEDD1-203ENST00000429527 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
NEDD1-203ENST00000429527 KCNQ3O43525 872 aa12.05□□□□□ -0.48
NEDD1-203ENST00000429527 MMP10P09238 476 aa12.05□□□□□ -0.48
NEDD1-203ENST00000429527 KCNA3P22001 575 aa12.05□□□□□ -0.48
NEDD1-203ENST00000429527 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
NEDD1-203ENST00000429527 DDIT3P35638 169 aa12.05□□□□□ -0.48
NEDD1-203ENST00000429527 NLGN2Q8NFZ4 835 aa12.05□□□□□ -0.48
NEDD1-203ENST00000429527 BCAR3O75815 825 aa12.04□□□□□ -0.48
NEDD1-203ENST00000429527 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
NEDD1-203ENST00000429527 SNED1Q8TER0 1413 aa12.04□□□□□ -0.48
NEDD1-203ENST00000429527 NBPF26B4DH59 902 aa12.03□□□□□ -0.48
NEDD1-203ENST00000429527 PHF14O94880 888 aa12.03□□□□□ -0.48
NEDD1-203ENST00000429527 CALD1Q05682 793 aaKnown RBP12.03□□□□□ -0.48
NEDD1-203ENST00000429527 NBPF10Q6P3W6 841 aaKnown RBP12.03□□□□□ -0.48
NEDD1-203ENST00000429527 NBPF15Q8N660 670 aa12.03□□□□□ -0.48
NEDD1-203ENST00000429527 IFT57Q9NWB7 429 aa12.03□□□□□ -0.48
NEDD1-203ENST00000429527 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
NEDD1-203ENST00000429527 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
NEDD1-203ENST00000429527 RIPK4P57078 832 aa12.02□□□□□ -0.48
NEDD1-203ENST00000429527 NFIXQ14938 502 aa12.02□□□□□ -0.48
NEDD1-203ENST00000429527 ZPR1O75312 459 aa12.02□□□□□ -0.49
NEDD1-203ENST00000429527 YBX3P16989 372 aaKnown RBP eCLIP12.02□□□□□ -0.493e-8■□□□□ 10.5
NEDD1-203ENST00000429527 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
NEDD1-203ENST00000429527 CFAP44Q96MT7 982 aa12.02□□□□□ -0.49
NEDD1-203ENST00000429527 PDIA6Q15084 440 aa12.02□□□□□ -0.49
NEDD1-203ENST00000429527 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
NEDD1-203ENST00000429527 USP16Q9Y5T5 823 aa12.02□□□□□ -0.49
NEDD1-203ENST00000429527 FSD2A1L4K1 749 aa12.01□□□□□ -0.49
NEDD1-203ENST00000429527 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
NEDD1-203ENST00000429527 WDR90Q96KV7 1748 aa12.01□□□□□ -0.49
NEDD1-203ENST00000429527 MSL1Q68DK7 614 aa12.01□□□□□ -0.49
NEDD1-203ENST00000429527 ZNF428Q96B54 188 aa12.01□□□□□ -0.49
NEDD1-203ENST00000429527 LTBP1Q14766 1721 aa12□□□□□ -0.49
NEDD1-203ENST00000429527 LTBP3Q9NS15 1303 aa12□□□□□ -0.49
NEDD1-203ENST00000429527 DCTN1Q14203 1278 aa12□□□□□ -0.49
NEDD1-203ENST00000429527 FRAT1Q92837 279 aaPredicted RBP12□□□□□ -0.49
NEDD1-203ENST00000429527 SKAP1Q86WV1 359 aa12□□□□□ -0.49
NEDD1-203ENST00000429527 ISY1Q9ULR0 285 aaKnown RBP12□□□□□ -0.49
NEDD1-203ENST00000429527 MVPQ14764 893 aaKnown RBP11.99□□□□□ -0.49
NEDD1-203ENST00000429527 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
NEDD1-203ENST00000429527 ZNF652Q9Y2D9 606 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 MAP3K15Q6ZN16 1313 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 STYK1Q6J9G0 422 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 SMC5Q8IY18 1101 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 BRIP1Q9BX63 1249 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 CHMP4AQ9BY43 222 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 MYH16Q9H6N6 1097 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 BECN1Q14457 450 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 IL27Q8NEV9 243 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 KIF16BQ96L93 1317 aa11.99□□□□□ -0.49
NEDD1-203ENST00000429527 A1BGP04217 495 aa11.98□□□□□ -0.49
NEDD1-203ENST00000429527 SALL2Q9Y467 1007 aaPredicted RBP11.98□□□□□ -0.49
NEDD1-203ENST00000429527 PCDHB15Q9Y5E8 787 aa11.98□□□□□ -0.49
NEDD1-203ENST00000429527 SERPINB2P05120 415 aa11.98□□□□□ -0.49
NEDD1-203ENST00000429527 TBC1D9BQ66K14 1250 aa11.98□□□□□ -0.49
NEDD1-203ENST00000429527 ZNF34Q8IZ26 560 aa11.98□□□□□ -0.49
NEDD1-203ENST00000429527 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
NEDD1-203ENST00000429527 SNX21Q969T3 373 aa11.97□□□□□ -0.49
NEDD1-203ENST00000429527 CACNA1SQ13698 1873 aa11.97□□□□□ -0.49
NEDD1-203ENST00000429527 RBM25P49756 843 aaKnown RBP11.97□□□□□ -0.49
NEDD1-203ENST00000429527 GNAI1P63096 354 aa11.97□□□□□ -0.49
NEDD1-203ENST00000429527 ALDH1L2Q3SY69 923 aa11.97□□□□□ -0.49
NEDD1-203ENST00000429527 CCDC146Q8IYE0 955 aa11.97□□□□□ -0.49
NEDD1-203ENST00000429527 TSPYL4Q9UJ04 414 aa11.97□□□□□ -0.49
NEDD1-203ENST00000429527 PRAMEF22A3QJZ6 481 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms