RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 GRM1Q13255 1194 aa15.92■□□□□ 0.14
ALMS1P1-201ENST00000428767 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
ALMS1P1-201ENST00000428767 CNKSR1Q969H4 720 aa15.92■□□□□ 0.14
ALMS1P1-201ENST00000428767 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
ALMS1P1-201ENST00000428767 HACL1Q9UJ83 578 aa15.92■□□□□ 0.14
ALMS1P1-201ENST00000428767 RNMTO43148 476 aaKnown RBP15.91■□□□□ 0.14
ALMS1P1-201ENST00000428767 EPHX2P34913 555 aa15.91■□□□□ 0.14
ALMS1P1-201ENST00000428767 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
ALMS1P1-201ENST00000428767 CNBD1Q8NA66 436 aa15.91■□□□□ 0.14
ALMS1P1-201ENST00000428767 TSKSQ9UJT2 592 aa15.91■□□□□ 0.14
ALMS1P1-201ENST00000428767 TBC1D2BQ9UPU7 963 aa15.91■□□□□ 0.14
ALMS1P1-201ENST00000428767 RNF123Q5XPI4 1314 aa15.91■□□□□ 0.14
ALMS1P1-201ENST00000428767 PDE4DIPQ5VU43 2346 aa15.9■□□□□ 0.14
ALMS1P1-201ENST00000428767 A0A087WZG4 1122 aa15.9■□□□□ 0.14
ALMS1P1-201ENST00000428767 SOGA3Q5TF21 947 aa15.9■□□□□ 0.14
ALMS1P1-201ENST00000428767 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
ALMS1P1-201ENST00000428767 CNTROBQ8N137 903 aa15.9■□□□□ 0.14
ALMS1P1-201ENST00000428767 LTBP1Q14766 1721 aa15.89■□□□□ 0.13
ALMS1P1-201ENST00000428767 RGS19P49795 217 aa15.89■□□□□ 0.13
ALMS1P1-201ENST00000428767 ST5P78524 1137 aa15.89■□□□□ 0.13
ALMS1P1-201ENST00000428767 VSIG10Q8N0Z9 540 aa15.89■□□□□ 0.13
ALMS1P1-201ENST00000428767 ZNF277Q9NRM2 450 aaPredicted RBP15.89■□□□□ 0.13
ALMS1P1-201ENST00000428767 SRGNP10124 158 aa15.88■□□□□ 0.13
ALMS1P1-201ENST00000428767 FMR1Q06787 632 aaKnown RBP eCLIP15.88■□□□□ 0.13
ALMS1P1-201ENST00000428767 CCDC93Q567U6 631 aa15.88■□□□□ 0.13
ALMS1P1-201ENST00000428767 OLFM4Q6UX06 510 aa15.88■□□□□ 0.13
ALMS1P1-201ENST00000428767 MASTLQ96GX5 879 aa15.88■□□□□ 0.13
ALMS1P1-201ENST00000428767 CAPNS2Q96L46 248 aa15.88■□□□□ 0.13
ALMS1P1-201ENST00000428767 BEGAINQ9BUH8 593 aa15.88■□□□□ 0.13
ALMS1P1-201ENST00000428767 STARD3NLO95772 234 aa15.87■□□□□ 0.13
ALMS1P1-201ENST00000428767 SETDB2Q96T68 719 aa15.87■□□□□ 0.13
ALMS1P1-201ENST00000428767 SIPA1L3O60292 1781 aaPredicted RBP15.86■□□□□ 0.13
ALMS1P1-201ENST00000428767 IL13P35225 146 aa15.86■□□□□ 0.13
ALMS1P1-201ENST00000428767 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
ALMS1P1-201ENST00000428767 CYP4F22Q6NT55 531 aa15.86■□□□□ 0.13
ALMS1P1-201ENST00000428767 PNMA8AQ86V59 439 aaPredicted RBP15.86■□□□□ 0.13
ALMS1P1-201ENST00000428767 TTC5Q8N0Z6 440 aa15.86■□□□□ 0.13
ALMS1P1-201ENST00000428767 HMOX1P09601 288 aa15.85■□□□□ 0.13
ALMS1P1-201ENST00000428767 MORC1Q86VD1 984 aa15.85■□□□□ 0.13
ALMS1P1-201ENST00000428767 DDX21Q9NR30 783 aaKnown RBP eCLIP15.85■□□□□ 0.13
ALMS1P1-201ENST00000428767 C7orf43Q8WVR3 580 aa15.84■□□□□ 0.13
ALMS1P1-201ENST00000428767 GPR101Q96P66 508 aaPredicted RBP15.84■□□□□ 0.13
ALMS1P1-201ENST00000428767 CAMTA2O94983 1202 aa15.83■□□□□ 0.12
ALMS1P1-201ENST00000428767 ECE1P42892 770 aa15.83■□□□□ 0.12
ALMS1P1-201ENST00000428767 MTHFSDQ2M296 383 aaKnown RBP15.83■□□□□ 0.12
ALMS1P1-201ENST00000428767 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
ALMS1P1-201ENST00000428767 MCOLN1Q9GZU1 580 aa15.83■□□□□ 0.12
ALMS1P1-201ENST00000428767 PANK3Q9H999 370 aa15.83■□□□□ 0.12
ALMS1P1-201ENST00000428767 HEG1Q9ULI3 1381 aa15.83■□□□□ 0.12
ALMS1P1-201ENST00000428767 AOC2O75106 756 aa15.82■□□□□ 0.12
ALMS1P1-201ENST00000428767 A1BGP04217 495 aa15.82■□□□□ 0.12
ALMS1P1-201ENST00000428767 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
ALMS1P1-201ENST00000428767 NPM2Q86SE8 214 aaKnown RBP15.82■□□□□ 0.12
ALMS1P1-201ENST00000428767 GJA3Q9Y6H8 435 aa15.82■□□□□ 0.12
ALMS1P1-201ENST00000428767 NPR1P16066 1061 aa15.81■□□□□ 0.12
ALMS1P1-201ENST00000428767 COL4A5P29400 1685 aa15.81■□□□□ 0.12
ALMS1P1-201ENST00000428767 IL6STP40189 918 aaPredicted RBP15.81■□□□□ 0.12
ALMS1P1-201ENST00000428767 NBPF5PQ86XG9 351 aaPredicted RBP15.81■□□□□ 0.12
ALMS1P1-201ENST00000428767 FZD9O00144 591 aa15.8■□□□□ 0.12
ALMS1P1-201ENST00000428767 TRAF5O00463 557 aa15.8■□□□□ 0.12
ALMS1P1-201ENST00000428767 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
ALMS1P1-201ENST00000428767 GPC2Q8N158 579 aa15.8■□□□□ 0.12
ALMS1P1-201ENST00000428767 SYNE4Q8N205 404 aa15.8■□□□□ 0.12
ALMS1P1-201ENST00000428767 FAM177BA6PVY3 158 aa15.79■□□□□ 0.12
ALMS1P1-201ENST00000428767 LMOD1P29536 600 aaPredicted RBP15.79■□□□□ 0.12
ALMS1P1-201ENST00000428767 DZIP3Q86Y13 1208 aaKnown RBP15.79■□□□□ 0.12
ALMS1P1-201ENST00000428767 DGKZQ13574 1117 aa15.78■□□□□ 0.12
ALMS1P1-201ENST00000428767 RTKN2Q8IZC4 609 aa15.78■□□□□ 0.12
ALMS1P1-201ENST00000428767 EPS15P42566 896 aa15.77■□□□□ 0.12
ALMS1P1-201ENST00000428767 TEFQ10587 303 aa15.77■□□□□ 0.12
ALMS1P1-201ENST00000428767 CST9Q5W186 159 aa15.77■□□□□ 0.12
ALMS1P1-201ENST00000428767 ZNF790Q6PG37 636 aa15.77■□□□□ 0.12
ALMS1P1-201ENST00000428767 JDP2Q8WYK2 163 aa15.77■□□□□ 0.12
ALMS1P1-201ENST00000428767 TEX13AQ9BXU3 409 aaPredicted RBP15.77■□□□□ 0.12
ALMS1P1-201ENST00000428767 TLL2Q9Y6L7 1015 aa15.77■□□□□ 0.12
ALMS1P1-201ENST00000428767 SCNN1DP51172 638 aa15.76■□□□□ 0.11
ALMS1P1-201ENST00000428767 EIF6P56537 245 aaKnown RBP15.76■□□□□ 0.11
ALMS1P1-201ENST00000428767 FMNL2Q96PY5 1086 aa15.75■□□□□ 0.11
ALMS1P1-201ENST00000428767 SNED1Q8TER0 1413 aa15.75■□□□□ 0.11
ALMS1P1-201ENST00000428767 MAP2K2P36507 400 aa15.74■□□□□ 0.11
ALMS1P1-201ENST00000428767 KLRG2A4D1S0 409 aaPredicted RBP15.73■□□□□ 0.11
ALMS1P1-201ENST00000428767 KCNQ3O43525 872 aa15.73■□□□□ 0.11
ALMS1P1-201ENST00000428767 SOX10P56693 466 aa15.73■□□□□ 0.11
ALMS1P1-201ENST00000428767 IL17REQ8NFR9 667 aa15.73■□□□□ 0.11
ALMS1P1-201ENST00000428767 NIP7Q9Y221 180 aaKnown RBP eCLIP15.73■□□□□ 0.11
ALMS1P1-201ENST00000428767 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
ALMS1P1-201ENST00000428767 CA12O43570 354 aa15.72■□□□□ 0.11
ALMS1P1-201ENST00000428767 CELF2O95319 508 aaKnown RBP15.72■□□□□ 0.11
ALMS1P1-201ENST00000428767 CIAPIN1Q6FI81 312 aa15.72■□□□□ 0.11
ALMS1P1-201ENST00000428767 TPTE2Q6XPS3 522 aa15.72■□□□□ 0.11
ALMS1P1-201ENST00000428767 SLC51AQ86UW1 340 aa15.72■□□□□ 0.11
ALMS1P1-201ENST00000428767 PSMD1Q99460 953 aa15.72■□□□□ 0.11
ALMS1P1-201ENST00000428767 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.11
ALMS1P1-201ENST00000428767 ALDH1B1P30837 517 aa15.71■□□□□ 0.11
ALMS1P1-201ENST00000428767 USP50Q70EL3 339 aaPredicted RBP15.71■□□□□ 0.11
ALMS1P1-201ENST00000428767 SAPCD2Q86UD0 394 aa15.71■□□□□ 0.11
ALMS1P1-201ENST00000428767 LARGE2Q8N3Y3 721 aa15.71■□□□□ 0.11
ALMS1P1-201ENST00000428767 ZNF408Q9H9D4 720 aa15.71■□□□□ 0.11
ALMS1P1-201ENST00000428767 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
ALMS1P1-201ENST00000428767 NUP98P52948 1817 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms