RNA–Protein interactions for RNA: ENST00000427978.6

TRPM4-202, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best) BASIC

Gene TRPM4, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-202ENST00000427978 FAM227BQ96M60 508 aa16.05■□□□□ 0.16
TRPM4-202ENST00000427978 ZKSCAN5Q9Y2L8 839 aa16.05■□□□□ 0.16
TRPM4-202ENST00000427978 EIF4A1P60842 406 aaKnown RBP16.05■□□□□ 0.16
TRPM4-202ENST00000427978 CUL4AQ13619 759 aa16.05■□□□□ 0.16
TRPM4-202ENST00000427978 RRP9O43818 475 aaKnown RBP16.04■□□□□ 0.16
TRPM4-202ENST00000427978 GLRX3O76003 335 aaKnown RBP16.04■□□□□ 0.16
TRPM4-202ENST00000427978 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
TRPM4-202ENST00000427978 EDC3Q96F86 508 aaKnown RBP16.04■□□□□ 0.16
TRPM4-202ENST00000427978 NOL7Q9UMY1 257 aaKnown RBP16.04■□□□□ 0.16
TRPM4-202ENST00000427978 CYP46A1Q9Y6A2 500 aa16.04■□□□□ 0.16
TRPM4-202ENST00000427978 ADAMTS13Q76LX8 1427 aa16.04■□□□□ 0.16
TRPM4-202ENST00000427978 ZSCAN22P10073 491 aaPredicted RBP16.04■□□□□ 0.16
TRPM4-202ENST00000427978 TSC1Q92574 1164 aa16.04■□□□□ 0.16
TRPM4-202ENST00000427978 TFIP11Q9UBB9 837 aaKnown RBP16.04■□□□□ 0.16
TRPM4-202ENST00000427978 STAP2Q9UGK3 403 aa16.04■□□□□ 0.16
TRPM4-202ENST00000427978 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
TRPM4-202ENST00000427978 CEBPZQ03701 1054 aaKnown RBP16.04■□□□□ 0.16
TRPM4-202ENST00000427978 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
TRPM4-202ENST00000427978 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
TRPM4-202ENST00000427978 RAD50Q92878 1312 aa16.03■□□□□ 0.16
TRPM4-202ENST00000427978 SALL3Q9BXA9 1300 aa16.03■□□□□ 0.16
TRPM4-202ENST00000427978 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
TRPM4-202ENST00000427978 HSP90AB4PQ58FF6 505 aa16.03■□□□□ 0.16
TRPM4-202ENST00000427978 ECHDC1Q9NTX5 307 aa16.03■□□□□ 0.16
TRPM4-202ENST00000427978 ADCY5O95622 1261 aa16.03■□□□□ 0.16
TRPM4-202ENST00000427978 BEND3Q5T5X7 828 aa16.03■□□□□ 0.16
TRPM4-202ENST00000427978 LARP1BQ659C4 914 aaKnown RBP16.03■□□□□ 0.16
TRPM4-202ENST00000427978 DRC7Q8IY82 874 aa16.03■□□□□ 0.16
TRPM4-202ENST00000427978 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRPM4-202ENST00000427978 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.16
TRPM4-202ENST00000427978 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.16
TRPM4-202ENST00000427978 CSB-PGBD3P0DP91 1061 aa16.02■□□□□ 0.15
TRPM4-202ENST00000427978 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.15
TRPM4-202ENST00000427978 LSG1Q9H089 658 aaKnown RBP16.02■□□□□ 0.15
TRPM4-202ENST00000427978 ZNF330Q9Y3S2 320 aaPredicted RBP16.02■□□□□ 0.15
TRPM4-202ENST00000427978 RIMBP3CA6NJZ7 1639 aa16.02■□□□□ 0.15
TRPM4-202ENST00000427978 RIMBP3BA6NNM3 1639 aa16.02■□□□□ 0.15
TRPM4-202ENST00000427978 RIMBP3Q9UFD9 1639 aa16.02■□□□□ 0.15
TRPM4-202ENST00000427978 FBXW7Q969H0 707 aa16.01■□□□□ 0.15
TRPM4-202ENST00000427978 USP31Q70CQ4 1352 aa16.01■□□□□ 0.15
TRPM4-202ENST00000427978 CKAP2LQ8IYA6 745 aa16.01■□□□□ 0.15
TRPM4-202ENST00000427978 NLRP2Q9NX02 1062 aa16.01■□□□□ 0.15
TRPM4-202ENST00000427978 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
TRPM4-202ENST00000427978 SPATA31D1Q6ZQQ2 1576 aa16.01■□□□□ 0.15
TRPM4-202ENST00000427978 F13A1P00488 732 aa16.01■□□□□ 0.15
TRPM4-202ENST00000427978 TLR7Q9NYK1 1049 aaKnown RBP16.01■□□□□ 0.15
TRPM4-202ENST00000427978 RBM8AQ9Y5S9 174 aaKnown RBP16.01■□□□□ 0.15
TRPM4-202ENST00000427978 CCDC183Q5T5S1 534 aa16■□□□□ 0.15
TRPM4-202ENST00000427978 DDX11Q96FC9 970 aa16■□□□□ 0.15
TRPM4-202ENST00000427978 LRRC2Q9BYS8 371 aa16■□□□□ 0.15
TRPM4-202ENST00000427978 TBX22Q9Y458 520 aa16■□□□□ 0.15
TRPM4-202ENST00000427978 ATP6V1DQ9Y5K8 247 aa16■□□□□ 0.15
TRPM4-202ENST00000427978 NMIQ13287 307 aaPredicted RBP16■□□□□ 0.15
TRPM4-202ENST00000427978 BICC1Q9H694 974 aaKnown RBP16■□□□□ 0.15
TRPM4-202ENST00000427978 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.99■□□□□ 0.15
TRPM4-202ENST00000427978 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
TRPM4-202ENST00000427978 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
TRPM4-202ENST00000427978 ORAI2Q96SN7 254 aa15.99■□□□□ 0.15
TRPM4-202ENST00000427978 PLEKHG1Q9ULL1 1385 aa15.98■□□□□ 0.15
TRPM4-202ENST00000427978 ATP5J2-PTCD1G3V325 749 aa15.98■□□□□ 0.15
TRPM4-202ENST00000427978 PTCD1O75127 700 aaKnown RBP15.98■□□□□ 0.15
TRPM4-202ENST00000427978 SUCLG2Q96I99 432 aa15.98■□□□□ 0.15
TRPM4-202ENST00000427978 KDRP35968 1356 aa15.98■□□□□ 0.15
TRPM4-202ENST00000427978 IP6K1Q92551 441 aa15.98■□□□□ 0.15
TRPM4-202ENST00000427978 PDLIM2Q96JY6 352 aa15.98■□□□□ 0.15
TRPM4-202ENST00000427978 MYD88Q99836 296 aa15.98■□□□□ 0.15
TRPM4-202ENST00000427978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
TRPM4-202ENST00000427978 PEAK1Q9H792 1746 aa15.98■□□□□ 0.15
TRPM4-202ENST00000427978 ME3Q16798 604 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 CHGBP05060 677 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 UBE2HP62256 183 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 BLOC1S2Q6QNY1 142 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 BICD2Q8TD16 824 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 EAF2Q96CJ1 260 aaPredicted RBP15.97■□□□□ 0.15
TRPM4-202ENST00000427978 NRXN3Q9Y4C0 1643 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 TECPR2O15040 1411 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 NEXNQ0ZGT2 675 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 POLA2Q14181 598 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 NEUROD6Q96NK8 337 aa15.97■□□□□ 0.15
TRPM4-202ENST00000427978 CSPP1Q1MSJ5 1256 aa15.96■□□□□ 0.15
TRPM4-202ENST00000427978 DDX58O95786 925 aaKnown RBP15.96■□□□□ 0.15
TRPM4-202ENST00000427978 CREB3L3Q68CJ9 461 aa15.96■□□□□ 0.15
TRPM4-202ENST00000427978 HYPKQ9NX55 129 aa15.96■□□□□ 0.15
TRPM4-202ENST00000427978 KSR2Q6VAB6 950 aa15.96■□□□□ 0.14
TRPM4-202ENST00000427978 CCDC129Q6ZRS4 1044 aa15.96■□□□□ 0.14
TRPM4-202ENST00000427978 TAF6LQ9Y6J9 622 aa15.96■□□□□ 0.14
TRPM4-202ENST00000427978 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.95■□□□□ 0.14
TRPM4-202ENST00000427978 GRM8O00222 908 aa15.95■□□□□ 0.14
TRPM4-202ENST00000427978 TPCN1Q9ULQ1 816 aa15.95■□□□□ 0.14
TRPM4-202ENST00000427978 C3P01024 1663 aa15.95■□□□□ 0.14
TRPM4-202ENST00000427978 A0A0D9SFI3 127 aa15.95■□□□□ 0.14
TRPM4-202ENST00000427978 H3BQV1 296 aa15.95■□□□□ 0.14
TRPM4-202ENST00000427978 RNMTO43148 476 aaKnown RBP15.95■□□□□ 0.14
TRPM4-202ENST00000427978 IFFO2Q5TF58 517 aa15.95■□□□□ 0.14
TRPM4-202ENST00000427978 CDC37L1Q7L3B6 337 aa15.95■□□□□ 0.14
TRPM4-202ENST00000427978 RPAP1Q9BWH6 1393 aaPredicted RBP15.94■□□□□ 0.14
TRPM4-202ENST00000427978 AKAP4Q5JQC9 854 aa15.94■□□□□ 0.14
TRPM4-202ENST00000427978 EVI5LQ96CN4 794 aa15.94■□□□□ 0.14
TRPM4-202ENST00000427978 GCP02774 474 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms