RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 C9orf131Q5VYM1 1079 aa24.2■■□□□ 1.46
PSPC1-202ENST00000427943 RASSF7Q02833 373 aa24.19■■□□□ 1.46
PSPC1-202ENST00000427943 CLEC4GQ6UXB4 293 aa24.19■■□□□ 1.46
PSPC1-202ENST00000427943 TTLL6Q8N841 843 aa24.19■■□□□ 1.46
PSPC1-202ENST00000427943 RUNDC1Q96C34 613 aa24.19■■□□□ 1.46
PSPC1-202ENST00000427943 BRIP1Q9BX63 1249 aa24.19■■□□□ 1.46
PSPC1-202ENST00000427943 SLX4Q8IY92 1834 aa24.19■■□□□ 1.46
PSPC1-202ENST00000427943 SENP3-EIF4A1A0A087X0R7 540 aa24.18■■□□□ 1.46
PSPC1-202ENST00000427943 MYL6BP14649 208 aa24.18■■□□□ 1.46
PSPC1-202ENST00000427943 PDE6BP35913 854 aa24.18■■□□□ 1.46
PSPC1-202ENST00000427943 ST5P78524 1137 aa24.18■■□□□ 1.46
PSPC1-202ENST00000427943 HLFQ16534 295 aa24.18■■□□□ 1.46
PSPC1-202ENST00000427943 ZNF622Q969S3 477 aaKnown RBP eCLIP24.18■■□□□ 1.463e-14■■□□□ 11.7
PSPC1-202ENST00000427943 ADAMTS8Q9UP79 889 aa24.18■■□□□ 1.46
PSPC1-202ENST00000427943 FER1L6Q2WGJ9 1857 aa24.17■■□□□ 1.46
PSPC1-202ENST00000427943 NBPF5PQ86XG9 351 aaPredicted RBP24.17■■□□□ 1.46
PSPC1-202ENST00000427943 RNF181Q9P0P0 153 aa24.17■■□□□ 1.46
PSPC1-202ENST00000427943 NIP7Q9Y221 180 aaKnown RBP eCLIP24.17■■□□□ 1.46
PSPC1-202ENST00000427943 TNRC6CQ9HCJ0 1690 aaKnown RBP24.17■■□□□ 1.46
PSPC1-202ENST00000427943 FAM177BA6PVY3 158 aa24.15■■□□□ 1.46
PSPC1-202ENST00000427943 ZEB1P37275 1124 aaPredicted RBP24.15■■□□□ 1.46
PSPC1-202ENST00000427943 TTLL7Q6ZT98 887 aa24.14■■□□□ 1.45
PSPC1-202ENST00000427943 ZNF219Q9P2Y4 722 aaPredicted RBP24.14■■□□□ 1.45
PSPC1-202ENST00000427943 PDZRN3Q9UPQ7 1066 aa24.14■■□□□ 1.45
PSPC1-202ENST00000427943 DICER1Q9UPY3 1922 aaKnown RBP24.14■■□□□ 1.45
PSPC1-202ENST00000427943 TRIM35Q9UPQ4 493 aa24.13■■□□□ 1.45
PSPC1-202ENST00000427943 ANKRD36CQ5JPF3 1778 aa24.13■■□□□ 1.45
PSPC1-202ENST00000427943 MAP3K15Q6ZN16 1313 aa24.12■■□□□ 1.45
PSPC1-202ENST00000427943 KIF3CO14782 793 aa24.12■■□□□ 1.45
PSPC1-202ENST00000427943 RGL2O15211 777 aa24.12■■□□□ 1.45
PSPC1-202ENST00000427943 KIF6Q6ZMV9 814 aa24.12■■□□□ 1.45
PSPC1-202ENST00000427943 EIF2S2P20042 333 aaKnown RBP24.11■■□□□ 1.45
PSPC1-202ENST00000427943 ZBTB3Q9H5J0 574 aa24.11■■□□□ 1.45
PSPC1-202ENST00000427943 BABAM1Q9NWV8 329 aa24.11■■□□□ 1.45
PSPC1-202ENST00000427943 LAS1LQ9Y4W2 734 aaKnown RBP24.11■■□□□ 1.45
PSPC1-202ENST00000427943 ERBB4Q15303 1308 aa24.1■■□□□ 1.45
PSPC1-202ENST00000427943 C21orf2O43822 256 aa24.1■■□□□ 1.45
PSPC1-202ENST00000427943 SRGNP10124 158 aa24.1■■□□□ 1.45
PSPC1-202ENST00000427943 PRELPP51888 382 aa24.1■■□□□ 1.45
PSPC1-202ENST00000427943 NMRK2Q9NPI5 230 aa24.1■■□□□ 1.45
PSPC1-202ENST00000427943 ERVV-1B6SEH8 477 aa24.09■■□□□ 1.45
PSPC1-202ENST00000427943 NFKBIEO00221 500 aa24.09■■□□□ 1.45
PSPC1-202ENST00000427943 STYK1Q6J9G0 422 aa24.09■■□□□ 1.45
PSPC1-202ENST00000427943 TPTE2Q6XPS3 522 aa24.09■■□□□ 1.45
PSPC1-202ENST00000427943 ANXA1P04083 346 aa24.08■■□□□ 1.45
PSPC1-202ENST00000427943 KRT24Q2M2I5 525 aa24.08■■□□□ 1.45
PSPC1-202ENST00000427943 NECTIN2Q92692 538 aa24.08■■□□□ 1.45
PSPC1-202ENST00000427943 ABCC12Q96J65 1359 aa24.07■■□□□ 1.44
PSPC1-202ENST00000427943 GPTP24298 496 aa24.07■■□□□ 1.44
PSPC1-202ENST00000427943 PDIA6Q15084 440 aa24.07■■□□□ 1.44
PSPC1-202ENST00000427943 PROSER3Q2NL68 480 aa24.07■■□□□ 1.44
PSPC1-202ENST00000427943 PRPF40BQ6NWY9 871 aaKnown RBP24.07■■□□□ 1.44
PSPC1-202ENST00000427943 CNKSR1Q969H4 720 aa24.07■■□□□ 1.44
PSPC1-202ENST00000427943 MASTLQ96GX5 879 aa24.07■■□□□ 1.44
PSPC1-202ENST00000427943 CHL1O00533 1208 aa24.06■■□□□ 1.44
PSPC1-202ENST00000427943 LMNB1P20700 586 aa24.06■■□□□ 1.44
PSPC1-202ENST00000427943 GTF2E1P29083 439 aaPredicted RBP24.06■■□□□ 1.44
PSPC1-202ENST00000427943 LRP10Q7Z4F1 713 aa24.06■■□□□ 1.44
PSPC1-202ENST00000427943 UBN2Q6ZU65 1347 aa24.06■■□□□ 1.44
PSPC1-202ENST00000427943 NUTM1Q86Y26 1132 aa24.05■■□□□ 1.44
PSPC1-202ENST00000427943 APAF1O14727 1248 aa24.03■■□□□ 1.44
PSPC1-202ENST00000427943 NPR1P16066 1061 aa24.03■■□□□ 1.44
PSPC1-202ENST00000427943 CCDC184Q52MB2 194 aa24.03■■□□□ 1.44
PSPC1-202ENST00000427943 GIGYF2Q6Y7W6 1299 aaKnown RBP24.03■■□□□ 1.44
PSPC1-202ENST00000427943 KDM2BQ8NHM5 1336 aa24.03■■□□□ 1.44
PSPC1-202ENST00000427943 LAMB2P55268 1798 aa24.02■■□□□ 1.44
PSPC1-202ENST00000427943 NYXQ9GZU5 481 aa24.02■■□□□ 1.44
PSPC1-202ENST00000427943 IBTKQ9P2D0 1353 aaPredicted RBP24.02■■□□□ 1.44
PSPC1-202ENST00000427943 KLRG2A4D1S0 409 aaPredicted RBP24.01■■□□□ 1.43
PSPC1-202ENST00000427943 ERFEQ4G0M1 354 aa24.01■■□□□ 1.43
PSPC1-202ENST00000427943 SUSD4Q5VX71 490 aa24.01■■□□□ 1.43
PSPC1-202ENST00000427943 ZC3H4Q9UPT8 1303 aaKnown RBP24.01■■□□□ 1.43
PSPC1-202ENST00000427943 ZNF316A6NFI3 1004 aaPredicted RBP24■■□□□ 1.43
PSPC1-202ENST00000427943 AIMP1Q12904 312 aaKnown RBP24■■□□□ 1.43
PSPC1-202ENST00000427943 ZNF34Q8IZ26 560 aa24■■□□□ 1.43
PSPC1-202ENST00000427943 XAGE3Q8WTP9 111 aa23.99■■□□□ 1.43
PSPC1-202ENST00000427943 CFAP44Q96MT7 982 aa23.99■■□□□ 1.43
PSPC1-202ENST00000427943 TAOK3Q9H2K8 898 aa23.99■■□□□ 1.43
PSPC1-202ENST00000427943 LTBP3Q9NS15 1303 aa23.99■■□□□ 1.43
PSPC1-202ENST00000427943 TOMM70O94826 608 aa23.98■■□□□ 1.43
PSPC1-202ENST00000427943 NTSR2O95665 410 aa23.98■■□□□ 1.43
PSPC1-202ENST00000427943 HDGFL1Q5TGJ6 251 aa23.98■■□□□ 1.43
PSPC1-202ENST00000427943 COPS6Q7L5N1 327 aa23.98■■□□□ 1.43
PSPC1-202ENST00000427943 RRAGCQ9HB90 399 aa23.98■■□□□ 1.43
PSPC1-202ENST00000427943 DDX21Q9NR30 783 aaKnown RBP eCLIP23.98■■□□□ 1.43
PSPC1-202ENST00000427943 MBIPQ9NS73 344 aa23.98■■□□□ 1.43
PSPC1-202ENST00000427943 CHPF2Q9P2E5 772 aa23.98■■□□□ 1.43
PSPC1-202ENST00000427943 RIC1Q4ADV7 1423 aa23.98■■□□□ 1.43
PSPC1-202ENST00000427943 HSPA6P17066 643 aa23.97■■□□□ 1.43
PSPC1-202ENST00000427943 SOGA3Q5TF21 947 aa23.97■■□□□ 1.43
PSPC1-202ENST00000427943 C7orf43Q8WVR3 580 aa23.97■■□□□ 1.43
PSPC1-202ENST00000427943 CEP350Q5VT06 3117 aa23.97■■□□□ 1.43
PSPC1-202ENST00000427943 CCDC93Q567U6 631 aa23.96■■□□□ 1.43
PSPC1-202ENST00000427943 OLFM4Q6UX06 510 aa23.96■■□□□ 1.43
PSPC1-202ENST00000427943 C16orf71Q8IYS4 520 aaPredicted RBP23.96■■□□□ 1.43
PSPC1-202ENST00000427943 WDR90Q96KV7 1748 aa23.96■■□□□ 1.43
PSPC1-202ENST00000427943 CRY2Q49AN0 593 aa23.95■■□□□ 1.42
PSPC1-202ENST00000427943 PARP10Q53GL7 1025 aa23.95■■□□□ 1.42
PSPC1-202ENST00000427943 PPP1R42Q7Z4L9 355 aa23.95■■□□□ 1.42
PSPC1-202ENST00000427943 GLTPD2A6NH11 291 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms