RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 STARD3NLO95772 234 aa10.53□□□□□ -0.72
SH3D19-204ENST00000427414 ANKRD13DQ6ZTN6 518 aa10.53□□□□□ -0.72
SH3D19-204ENST00000427414 ONECUT3O60422 494 aaPredicted RBP10.52□□□□□ -0.73
SH3D19-204ENST00000427414 SLC39A6Q13433 755 aa10.52□□□□□ -0.73
SH3D19-204ENST00000427414 TICAM2Q86XR7 235 aa10.52□□□□□ -0.73
SH3D19-204ENST00000427414 ERC1Q8IUD2 1116 aa10.52□□□□□ -0.73
SH3D19-204ENST00000427414 DDX54Q8TDD1 881 aaKnown RBP10.52□□□□□ -0.73
SH3D19-204ENST00000427414 TUBGCP6Q96RT7 1819 aa10.52□□□□□ -0.73
SH3D19-204ENST00000427414 ATRNO75882 1429 aa10.52□□□□□ -0.73
SH3D19-204ENST00000427414 COL5A3P25940 1745 aaPredicted RBP10.52□□□□□ -0.73
SH3D19-204ENST00000427414 GRM8O00222 908 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 PIGBQ92521 554 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 NAP1L5Q96NT1 182 aaPredicted RBP10.51□□□□□ -0.73
SH3D19-204ENST00000427414 ATG3Q9NT62 314 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 USP16Q9Y5T5 823 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 EPB41L2O43491 1005 aaKnown RBP10.51□□□□□ -0.73
SH3D19-204ENST00000427414 ANKRD45Q5TZF3 282 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 RIC3Q7Z5B4 369 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 GOLGA6L3A6NEY3 463 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 HSP90AB3PQ58FF7 597 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 XAGE3Q8WTP9 111 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 STAP2Q9UGK3 403 aa10.51□□□□□ -0.73
SH3D19-204ENST00000427414 NEURL1BA8MQ27 555 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 ERVV-1B6SEH8 477 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 PIP4K2BP78356 416 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 COPS6Q7L5N1 327 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 CCDC191Q8NCU4 936 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 PKNOX2Q96KN3 472 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 USP42Q9H9J4 1324 aaKnown RBP10.5□□□□□ -0.73
SH3D19-204ENST00000427414 XRCC6P12956 609 aaKnown RBP eCLIP10.5□□□□□ -0.73
SH3D19-204ENST00000427414 GCKRQ14397 625 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 PROSER3Q2NL68 480 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 KLHL34Q8N239 644 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 UPF2Q9HAU5 1272 aaKnown RBP10.5□□□□□ -0.73
SH3D19-204ENST00000427414 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
SH3D19-204ENST00000427414 LRRFIP2Q9Y608 721 aaKnown RBP10.5□□□□□ -0.73
SH3D19-204ENST00000427414 RABL6Q3YEC7 729 aaPredicted RBP10.49□□□□□ -0.73
SH3D19-204ENST00000427414 LRRCC1Q9C099 1032 aa10.49□□□□□ -0.73
SH3D19-204ENST00000427414 GZF1Q9H116 711 aaPredicted RBP10.49□□□□□ -0.73
SH3D19-204ENST00000427414 ANTXR1Q9H6X2 564 aa10.49□□□□□ -0.73
SH3D19-204ENST00000427414 C9orf78Q9NZ63 289 aaPredicted RBP10.49□□□□□ -0.73
SH3D19-204ENST00000427414 SALL3Q9BXA9 1300 aa10.49□□□□□ -0.73
SH3D19-204ENST00000427414 IL6STP40189 918 aaPredicted RBP10.49□□□□□ -0.73
SH3D19-204ENST00000427414 NECTIN2Q92692 538 aa10.49□□□□□ -0.73
SH3D19-204ENST00000427414 KIF1BPQ96EK5 621 aa10.49□□□□□ -0.73
SH3D19-204ENST00000427414 AK7Q96M32 723 aa10.49□□□□□ -0.73
SH3D19-204ENST00000427414 NBPF26B4DH59 902 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 ADAMTS2O95450 1211 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 IGKV5-2P06315 115 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 NBPF14Q5TI25 921 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 NBPF10Q6P3W6 841 aaKnown RBP10.48□□□□□ -0.73
SH3D19-204ENST00000427414 PLEKHM2Q8IWE5 1019 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 NBPF15Q8N660 670 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 PLA2G12BQ9BX93 195 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 C1orf115Q9H7X2 142 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 PRAMEF22A3QJZ6 481 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 H7C1W4 665 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
SH3D19-204ENST00000427414 BCORQ6W2J9 1755 aa10.47□□□□□ -0.73
SH3D19-204ENST00000427414 CYP19A1P11511 503 aaPredicted RBP10.47□□□□□ -0.73
SH3D19-204ENST00000427414 NGLY1Q96IV0 654 aa10.47□□□□□ -0.73
SH3D19-204ENST00000427414 ISCA1Q9BUE6 129 aa10.47□□□□□ -0.73
SH3D19-204ENST00000427414 LY75O60449 1722 aa10.47□□□□□ -0.73
SH3D19-204ENST00000427414 TTC22Q5TAA0 569 aa10.47□□□□□ -0.73
SH3D19-204ENST00000427414 MARCH10Q8NA82 808 aaPredicted RBP10.47□□□□□ -0.73
SH3D19-204ENST00000427414 TBC1D2Q9BYX2 928 aa10.47□□□□□ -0.73
SH3D19-204ENST00000427414 LNPKQ9C0E8 428 aa10.47□□□□□ -0.73
SH3D19-204ENST00000427414 CDHR2Q9BYE9 1310 aa10.47□□□□□ -0.73
SH3D19-204ENST00000427414 LAMB2P55268 1798 aa10.46□□□□□ -0.73
SH3D19-204ENST00000427414 HSP90B1P14625 803 aaKnown RBP10.46□□□□□ -0.73
SH3D19-204ENST00000427414 CLCN1P35523 988 aa10.46□□□□□ -0.73
SH3D19-204ENST00000427414 CASP7P55210 303 aa10.46□□□□□ -0.73
SH3D19-204ENST00000427414 HSP90AA2PQ14568 343 aaPredicted RBP10.46□□□□□ -0.73
SH3D19-204ENST00000427414 PPP1R42Q7Z4L9 355 aa10.46□□□□□ -0.73
SH3D19-204ENST00000427414 PANK2Q9BZ23 570 aa10.46□□□□□ -0.73
SH3D19-204ENST00000427414 TTC41PQ6P2S7 1318 aa10.46□□□□□ -0.73
SH3D19-204ENST00000427414 HSP90AA1P07900 732 aaKnown RBP10.46□□□□□ -0.74
SH3D19-204ENST00000427414 NBPF7P0C2Y1 421 aaPredicted RBP10.46□□□□□ -0.74
SH3D19-204ENST00000427414 TCIRG1Q13488 830 aa10.46□□□□□ -0.74
SH3D19-204ENST00000427414 KIF6Q6ZMV9 814 aa10.46□□□□□ -0.74
SH3D19-204ENST00000427414 COPRSQ9NQ92 184 aa10.46□□□□□ -0.74
SH3D19-204ENST00000427414 CWC25Q9NXE8 425 aaPredicted RBP10.46□□□□□ -0.74
SH3D19-204ENST00000427414 SBF2Q86WG5 1849 aa10.46□□□□□ -0.74
SH3D19-204ENST00000427414 A0A087WZG4 1122 aa10.45□□□□□ -0.74
SH3D19-204ENST00000427414 MCM4P33991 863 aa10.45□□□□□ -0.74
SH3D19-204ENST00000427414 RC3H1Q5TC82 1133 aaKnown RBP10.45□□□□□ -0.74
SH3D19-204ENST00000427414 MAP3K15Q6ZN16 1313 aa10.45□□□□□ -0.74
SH3D19-204ENST00000427414 USP21Q9UK80 565 aa10.45□□□□□ -0.74
SH3D19-204ENST00000427414 TRPC5Q9UL62 973 aaPredicted RBP10.45□□□□□ -0.74
SH3D19-204ENST00000427414 PNMA6EA0A0J9YXQ4 647 aa10.45□□□□□ -0.74
SH3D19-204ENST00000427414 FSD2A1L4K1 749 aa10.45□□□□□ -0.74
SH3D19-204ENST00000427414 NUTM2BA6NNL0 878 aaPredicted RBP10.45□□□□□ -0.74
SH3D19-204ENST00000427414 NUTM2EB1AL46 878 aaPredicted RBP10.45□□□□□ -0.74
SH3D19-204ENST00000427414 CASC1Q6TDU7 716 aa10.45□□□□□ -0.74
SH3D19-204ENST00000427414 NUTM2AQ8IVF1 878 aaPredicted RBP10.45□□□□□ -0.74
SH3D19-204ENST00000427414 TBC1D32Q96NH3 1257 aa10.45□□□□□ -0.74
SH3D19-204ENST00000427414 ASAP1Q9ULH1 1129 aa10.45□□□□□ -0.74
SH3D19-204ENST00000427414 SRGAP3O43295 1099 aa10.44□□□□□ -0.74
SH3D19-204ENST00000427414 CDC45O75419 566 aa10.44□□□□□ -0.74
SH3D19-204ENST00000427414 MYL6BP14649 208 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms