RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 CACTINQ8WUQ7 758 aaKnown RBP14.79□□□□□ -0.04
LRTOMT-206ENST00000427369 SOS1Q07889 1333 aaPredicted RBP14.79□□□□□ -0.04
LRTOMT-206ENST00000427369 ST3GAL1Q11201 340 aa14.79□□□□□ -0.04
LRTOMT-206ENST00000427369 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.79□□□□□ -0.04
LRTOMT-206ENST00000427369 V9GYY5 206 aaPredicted RBP14.79□□□□□ -0.04
LRTOMT-206ENST00000427369 UBTFL1P0CB47 393 aaPredicted RBP14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 ME3Q16798 604 aa14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 PRPF40BQ6NWY9 871 aaKnown RBP14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 MORC2Q9Y6X9 1032 aaPredicted RBP14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 GOLGA6L4A6NEF3 574 aa14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 CEP135Q66GS9 1140 aa14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 CDC37L1Q7L3B6 337 aa14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 PLA2G4DQ86XP0 818 aa14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 USP44Q9H0E7 712 aa14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 TFIP11Q9UBB9 837 aaKnown RBP14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 CLIP2Q9UDT6 1046 aa14.78□□□□□ -0.04
LRTOMT-206ENST00000427369 PTH1RQ03431 593 aa14.77□□□□□ -0.04
LRTOMT-206ENST00000427369 CCDC144BQ3MJ40 725 aa14.77□□□□□ -0.04
LRTOMT-206ENST00000427369 CCDC144CPQ8IYA2 1237 aa14.77□□□□□ -0.04
LRTOMT-206ENST00000427369 RHPN1Q8TCX5 695 aa14.77□□□□□ -0.04
LRTOMT-206ENST00000427369 TMEM51Q9NW97 253 aa14.77□□□□□ -0.04
LRTOMT-206ENST00000427369 MTHFSDQ2M296 383 aaKnown RBP14.77□□□□□ -0.04
LRTOMT-206ENST00000427369 VPS53Q5VIR6 699 aa14.77□□□□□ -0.04
LRTOMT-206ENST00000427369 PPP1R42Q7Z4L9 355 aa14.77□□□□□ -0.04
LRTOMT-206ENST00000427369 CYP46A1Q9Y6A2 500 aa14.77□□□□□ -0.04
LRTOMT-206ENST00000427369 PREX1Q8TCU6 1659 aa14.77□□□□□ -0.05
LRTOMT-206ENST00000427369 ZSCAN31Q96LW9 406 aaPredicted RBP14.77□□□□□ -0.05
LRTOMT-206ENST00000427369 DNAJC25Q9H1X3 360 aa14.76□□□□□ -0.05
LRTOMT-206ENST00000427369 SH2B1Q9NRF2 756 aaPredicted RBP14.76□□□□□ -0.05
LRTOMT-206ENST00000427369 SSH3Q8TE77 659 aa14.76□□□□□ -0.05
LRTOMT-206ENST00000427369 ZNF165P49910 485 aa14.76□□□□□ -0.05
LRTOMT-206ENST00000427369 TERF2Q15554 542 aa14.76□□□□□ -0.05
LRTOMT-206ENST00000427369 CCDC30Q5VVM6 783 aa14.76□□□□□ -0.05
LRTOMT-206ENST00000427369 USP27XA6NNY8 438 aa14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 ARID5BQ14865 1188 aa14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 KMT5BQ4FZB7 885 aa14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 KRT222Q8N1A0 295 aa14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 ZNF215Q9UL58 517 aaPredicted RBP14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 RAB11FIP3O75154 756 aa14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 ZSWIM6Q9HCJ5 1215 aa14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 TPCN1Q9ULQ1 816 aa14.75□□□□□ -0.05
LRTOMT-206ENST00000427369 TXNDC2Q86VQ3 553 aa14.74□□□□□ -0.05
LRTOMT-206ENST00000427369 TDRD7Q8NHU6 1098 aaKnown RBP14.74□□□□□ -0.05
LRTOMT-206ENST00000427369 SPATA32Q96LK8 384 aa14.74□□□□□ -0.05
LRTOMT-206ENST00000427369 SRGAP3O43295 1099 aa14.74□□□□□ -0.05
LRTOMT-206ENST00000427369 ZNF397Q8NF99 534 aaPredicted RBP14.74□□□□□ -0.05
LRTOMT-206ENST00000427369 ARHGEF10O15013 1369 aa14.74□□□□□ -0.05
LRTOMT-206ENST00000427369 KCNJ4P48050 445 aa14.74□□□□□ -0.05
LRTOMT-206ENST00000427369 DLC1Q96QB1 1528 aa14.74□□□□□ -0.05
LRTOMT-206ENST00000427369 ELP1O95163 1332 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 NR1I2O75469 434 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 KIF1BPQ96EK5 621 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 MAP3K19Q56UN5 1328 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 ERICH4A6NGS2 130 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 BICD2Q8TD16 824 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 CLSTN2Q9H4D0 955 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 DDX19AQ9NUU7 478 aaKnown RBP14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 RIMBP3CA6NJZ7 1639 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 RIMBP3BA6NNM3 1639 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 RIMBP3Q9UFD9 1639 aa14.73□□□□□ -0.05
LRTOMT-206ENST00000427369 COL9A3Q14050 684 aaPredicted RBP14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 LRRC8AQ8IWT6 810 aa14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 TCEANC2Q96MN5 208 aa14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 TTC21AQ8NDW8 1320 aa14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 NPHP1O15259 732 aa14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 PTPN14Q15678 1187 aa14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 TRMT1Q9NXH9 659 aaKnown RBP14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 NRKQ7Z2Y5 1582 aa14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 ELF2Q15723 593 aa14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 LEO1Q8WVC0 666 aaPredicted RBP14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 RUFY2Q8WXA3 655 aa14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 SCAND2PQ9GZW5 306 aaPredicted RBP14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 ST7Q9NRC1 585 aa14.72□□□□□ -0.05
LRTOMT-206ENST00000427369 VGLL3A8MV65 326 aa14.71□□□□□ -0.05
LRTOMT-206ENST00000427369 FBXO38Q6PIJ6 1188 aa14.71□□□□□ -0.05
LRTOMT-206ENST00000427369 OS9Q13438 667 aaPredicted RBP14.71□□□□□ -0.05
LRTOMT-206ENST00000427369 POLA2Q14181 598 aa14.71□□□□□ -0.05
LRTOMT-206ENST00000427369 TM6SF1Q9BZW5 370 aa14.71□□□□□ -0.05
LRTOMT-206ENST00000427369 NPHP3Q7Z494 1330 aa14.71□□□□□ -0.05
LRTOMT-206ENST00000427369 XRN1Q8IZH2 1706 aaKnown RBP14.71□□□□□ -0.06
LRTOMT-206ENST00000427369 CCDC66A2RUB6 948 aa14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 NPM1P06748 294 aaKnown RBP eCLIP14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 ZKSCAN1P17029 563 aaPredicted RBP14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 LARP1Q6PKG0 1096 aaKnown RBP14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 PHAXQ9H814 394 aaKnown RBP14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 GOLGA6L19H0YKK7 550 aa14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 SKILP12757 684 aa14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 RBM43Q6ZSC3 357 aaKnown RBP14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 CCDC171Q6TFL3 1326 aa14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 PDCP20941 246 aa14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 STK3Q13188 491 aa14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 FILIP1Q7Z7B0 1213 aa14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 PGBD1Q96JS3 809 aa14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 RIMS1Q86UR5 1692 aaKnown RBP14.7□□□□□ -0.06
LRTOMT-206ENST00000427369 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms