RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 MSTNO14793 375 aa10.66□□□□□ -0.7
C9orf3-205ENST00000427193 PSMA6P60900 246 aaKnown RBP10.66□□□□□ -0.7
C9orf3-205ENST00000427193 TBCELQ5QJ74 424 aa10.66□□□□□ -0.7
C9orf3-205ENST00000427193 PROSER2Q86WR7 435 aaPredicted RBP10.66□□□□□ -0.7
C9orf3-205ENST00000427193 SIX5Q8N196 739 aa10.66□□□□□ -0.7
C9orf3-205ENST00000427193 FNBP4Q8N3X1 1017 aaPredicted RBP10.66□□□□□ -0.7
C9orf3-205ENST00000427193 ZNF468Q5VIY5 522 aaPredicted RBP10.65□□□□□ -0.7
C9orf3-205ENST00000427193 LINC00114Q6XXX2 140 aa10.65□□□□□ -0.7
C9orf3-205ENST00000427193 CLUAP1Q96AJ1 413 aa10.65□□□□□ -0.7
C9orf3-205ENST00000427193 PRR12Q9ULL5 1215 aa10.65□□□□□ -0.7
C9orf3-205ENST00000427193 CHMP3Q9Y3E7 222 aa10.65□□□□□ -0.7
C9orf3-205ENST00000427193 GNB5O14775 395 aa10.64□□□□□ -0.71
C9orf3-205ENST00000427193 ITGB2P05107 769 aa10.64□□□□□ -0.71
C9orf3-205ENST00000427193 HIRAP54198 1017 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-205ENST00000427193 GLMNQ92990 594 aa10.64□□□□□ -0.71
C9orf3-205ENST00000427193 NEUROD4Q9HD90 331 aa10.64□□□□□ -0.71
C9orf3-205ENST00000427193 KLF15Q9UIH9 416 aa10.64□□□□□ -0.71
C9orf3-205ENST00000427193 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
C9orf3-205ENST00000427193 DGKGP49619 791 aa10.63□□□□□ -0.71
C9orf3-205ENST00000427193 POTEAQ6S8J7 498 aa10.63□□□□□ -0.71
C9orf3-205ENST00000427193 LRRC69Q6ZNQ3 347 aa10.63□□□□□ -0.71
C9orf3-205ENST00000427193 FCHSD1Q86WN1 690 aa10.63□□□□□ -0.71
C9orf3-205ENST00000427193 C7orf43Q8WVR3 580 aa10.63□□□□□ -0.71
C9orf3-205ENST00000427193 SPOCK3Q9BQ16 436 aa10.63□□□□□ -0.71
C9orf3-205ENST00000427193 TSPAN10Q9H1Z9 355 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-205ENST00000427193 STRN4Q9NRL3 753 aa10.63□□□□□ -0.71
C9orf3-205ENST00000427193 COL8A1P27658 744 aa10.62□□□□□ -0.71
C9orf3-205ENST00000427193 C1orf53Q5VUE5 145 aa10.62□□□□□ -0.71
C9orf3-205ENST00000427193 CHSY3Q70JA7 882 aa10.62□□□□□ -0.71
C9orf3-205ENST00000427193 RHPN1Q8TCX5 695 aa10.62□□□□□ -0.71
C9orf3-205ENST00000427193 EIF4G1Q04637 1599 aaKnown RBP10.61□□□□□ -0.71
C9orf3-205ENST00000427193 LOC100996750A0A140TA64 210 aa10.61□□□□□ -0.71
C9orf3-205ENST00000427193 SH3PXD2AQ5TCZ1 1133 aa10.61□□□□□ -0.71
C9orf3-205ENST00000427193 ZNF594Q96JF6 807 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-205ENST00000427193 KRTAP4-6Q9BYQ5 205 aa10.61□□□□□ -0.71
C9orf3-205ENST00000427193 KRBA1A5PL33 1030 aa10.6□□□□□ -0.71
C9orf3-205ENST00000427193 PCBP4P57723 403 aaKnown RBP10.6□□□□□ -0.71
C9orf3-205ENST00000427193 TFIP11Q9UBB9 837 aaKnown RBP10.6□□□□□ -0.71
C9orf3-205ENST00000427193 MAFBQ9Y5Q3 323 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-205ENST00000427193 DKK1O94907 266 aa10.59□□□□□ -0.71
C9orf3-205ENST00000427193 PROCP04070 461 aa10.59□□□□□ -0.71
C9orf3-205ENST00000427193 GRIN2CQ14957 1233 aa10.59□□□□□ -0.71
C9orf3-205ENST00000427193 TSEN2Q8NCE0 465 aaKnown RBP10.59□□□□□ -0.71
C9orf3-205ENST00000427193 SUV39H2Q9H5I1 410 aa10.59□□□□□ -0.71
C9orf3-205ENST00000427193 NOP53Q9NZM5 478 aaKnown RBP10.59□□□□□ -0.71
C9orf3-205ENST00000427193 ANKIB1Q9P2G1 1089 aa10.59□□□□□ -0.71
C9orf3-205ENST00000427193 ZCCHC6Q5VYS8 1495 aaKnown RBP10.59□□□□□ -0.71
C9orf3-205ENST00000427193 SFI1A8K8P3 1242 aa10.58□□□□□ -0.72
C9orf3-205ENST00000427193 RASA1P20936 1047 aa10.58□□□□□ -0.72
C9orf3-205ENST00000427193 A6NJR5 290 aa10.57□□□□□ -0.72
C9orf3-205ENST00000427193 SYT9Q86SS6 491 aa10.57□□□□□ -0.72
C9orf3-205ENST00000427193 STAG2Q8N3U4 1231 aa10.57□□□□□ -0.72
C9orf3-205ENST00000427193 PHACTR1Q9C0D0 580 aa10.57□□□□□ -0.72
C9orf3-205ENST00000427193 ELOA3CA0A087WX78 387 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-205ENST00000427193 ELOA3DA6NLF2 546 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-205ENST00000427193 PPP1R12BO60237 982 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-205ENST00000427193 SEC13P55735 322 aa10.56□□□□□ -0.72
C9orf3-205ENST00000427193 ELOA3BQ3SY89 546 aa10.56□□□□□ -0.72
C9orf3-205ENST00000427193 ELOA3Q8NG57 546 aa10.56□□□□□ -0.72
C9orf3-205ENST00000427193 GAS2L2Q8NHY3 880 aa10.56□□□□□ -0.72
C9orf3-205ENST00000427193 HCN4Q9Y3Q4 1203 aa10.56□□□□□ -0.72
C9orf3-205ENST00000427193 SIN3BO75182 1162 aa10.55□□□□□ -0.72
C9orf3-205ENST00000427193 SFSWAPQ12872 951 aaKnown RBP10.55□□□□□ -0.72
C9orf3-205ENST00000427193 CALR3Q96L12 384 aaKnown RBP10.55□□□□□ -0.72
C9orf3-205ENST00000427193 CUX2O14529 1486 aa10.55□□□□□ -0.72
C9orf3-205ENST00000427193 C21orf2O43822 256 aa10.54□□□□□ -0.72
C9orf3-205ENST00000427193 ALAS2P22557 587 aa10.54□□□□□ -0.72
C9orf3-205ENST00000427193 LARP1Q6PKG0 1096 aaKnown RBP10.54□□□□□ -0.72
C9orf3-205ENST00000427193 MDFIQ99750 246 aa10.54□□□□□ -0.72
C9orf3-205ENST00000427193 PPP1R12CQ9BZL4 782 aa10.54□□□□□ -0.72
C9orf3-205ENST00000427193 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
C9orf3-205ENST00000427193 ADARB2-AS1A8MUL3 147 aa10.53□□□□□ -0.72
C9orf3-205ENST00000427193 KCNQ4P56696 695 aa10.53□□□□□ -0.72
C9orf3-205ENST00000427193 HSH2DQ96JZ2 352 aa10.53□□□□□ -0.72
C9orf3-205ENST00000427193 CEP63Q96MT8 703 aa10.53□□□□□ -0.72
C9orf3-205ENST00000427193 BRD7Q9NPI1 651 aa10.53□□□□□ -0.72
C9orf3-205ENST00000427193 NEUROD1Q13562 356 aa10.52□□□□□ -0.73
C9orf3-205ENST00000427193 HIF1AQ16665 826 aa10.52□□□□□ -0.73
C9orf3-205ENST00000427193 ALDH16A1Q8IZ83 802 aa10.52□□□□□ -0.73
C9orf3-205ENST00000427193 SCG3Q8WXD2 468 aaKnown RBP10.52□□□□□ -0.73
C9orf3-205ENST00000427193 TNFRSF25Q93038 417 aa10.52□□□□□ -0.73
C9orf3-205ENST00000427193 SUSD3Q96L08 255 aa10.52□□□□□ -0.73
C9orf3-205ENST00000427193 SLC30A3Q99726 388 aa10.52□□□□□ -0.73
C9orf3-205ENST00000427193 C2orf49Q9BVC5 232 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-205ENST00000427193 DCAF1Q9Y4B6 1507 aa10.52□□□□□ -0.73
C9orf3-205ENST00000427193 TYRO3Q06418 890 aa10.51□□□□□ -0.73
C9orf3-205ENST00000427193 SPEM2Q0P670 501 aa10.51□□□□□ -0.73
C9orf3-205ENST00000427193 ADAM23O75077 832 aa10.5□□□□□ -0.73
C9orf3-205ENST00000427193 PTK7Q13308 1070 aa10.5□□□□□ -0.73
C9orf3-205ENST00000427193 KANK4Q5T7N3 995 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-205ENST00000427193 KCNH4Q9UQ05 1017 aa10.5□□□□□ -0.73
C9orf3-205ENST00000427193 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
C9orf3-205ENST00000427193 CRTC2Q53ET0 693 aaPredicted RBP10.49□□□□□ -0.73
C9orf3-205ENST00000427193 ZNF280CQ8ND82 737 aa10.49□□□□□ -0.73
C9orf3-205ENST00000427193 TRIM11Q96F44 468 aa10.49□□□□□ -0.73
C9orf3-205ENST00000427193 BAG6P46379 1132 aa10.48□□□□□ -0.73
C9orf3-205ENST00000427193 HINFPQ9BQA5 517 aa10.48□□□□□ -0.73
C9orf3-205ENST00000427193 C1QTNF9BB2RNN3 333 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L15C9J2P7 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms