RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 FAM177BA6PVY3 158 aa16.17■□□□□ 0.18
SMIM12-203ENST00000426886 HOXB7P09629 217 aa16.17■□□□□ 0.18
SMIM12-203ENST00000426886 DDR1Q08345 913 aa16.17■□□□□ 0.18
SMIM12-203ENST00000426886 SYT17Q9BSW7 474 aa16.17■□□□□ 0.18
SMIM12-203ENST00000426886 WWC3Q9ULE0 1092 aa16.17■□□□□ 0.18
SMIM12-203ENST00000426886 KIF6Q6ZMV9 814 aa16.17■□□□□ 0.18
SMIM12-203ENST00000426886 ZNF428Q96B54 188 aa16.17■□□□□ 0.18
SMIM12-203ENST00000426886 DBF4Q9UBU7 674 aaPredicted RBP16.17■□□□□ 0.18
SMIM12-203ENST00000426886 CCDC24Q8N4L8 307 aa16.16■□□□□ 0.18
SMIM12-203ENST00000426886 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
SMIM12-203ENST00000426886 TM4SF1P30408 202 aa16.16■□□□□ 0.18
SMIM12-203ENST00000426886 LRP10Q7Z4F1 713 aa16.16■□□□□ 0.18
SMIM12-203ENST00000426886 PHAXQ9H814 394 aaKnown RBP16.16■□□□□ 0.18
SMIM12-203ENST00000426886 ERBB4Q15303 1308 aa16.16■□□□□ 0.18
SMIM12-203ENST00000426886 E9PSI1 815 aa16.15■□□□□ 0.18
SMIM12-203ENST00000426886 CCDC30Q5VVM6 783 aa16.15■□□□□ 0.18
SMIM12-203ENST00000426886 POLRMTO00411 1230 aaKnown RBP16.15■□□□□ 0.18
SMIM12-203ENST00000426886 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
SMIM12-203ENST00000426886 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
SMIM12-203ENST00000426886 SETDB2Q96T68 719 aa16.15■□□□□ 0.18
SMIM12-203ENST00000426886 LRP5O75197 1615 aa16.14■□□□□ 0.17
SMIM12-203ENST00000426886 NPHP1O15259 732 aa16.14■□□□□ 0.17
SMIM12-203ENST00000426886 VAMP4O75379 141 aa16.14■□□□□ 0.17
SMIM12-203ENST00000426886 GPTP24298 496 aa16.14■□□□□ 0.17
SMIM12-203ENST00000426886 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMIM12-203ENST00000426886 ZNF652Q9Y2D9 606 aa16.14■□□□□ 0.17
SMIM12-203ENST00000426886 MAP3K15Q6ZN16 1313 aa16.14■□□□□ 0.17
SMIM12-203ENST00000426886 SERPINB2P05120 415 aa16.14■□□□□ 0.17
SMIM12-203ENST00000426886 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
SMIM12-203ENST00000426886 STK31Q9BXU1 1019 aa16.13■□□□□ 0.17
SMIM12-203ENST00000426886 LAMB4A4D0S4 1761 aa16.13■□□□□ 0.17
SMIM12-203ENST00000426886 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
SMIM12-203ENST00000426886 CLEC4GQ6UXB4 293 aa16.12■□□□□ 0.17
SMIM12-203ENST00000426886 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
SMIM12-203ENST00000426886 ANKRD13DQ6ZTN6 518 aa16.11■□□□□ 0.17
SMIM12-203ENST00000426886 G2E3Q7L622 706 aa16.1■□□□□ 0.17
SMIM12-203ENST00000426886 GIGYF2Q6Y7W6 1299 aaKnown RBP16.1■□□□□ 0.17
SMIM12-203ENST00000426886 RIC3Q7Z5B4 369 aa16.1■□□□□ 0.17
SMIM12-203ENST00000426886 NBPF5PQ86XG9 351 aaPredicted RBP16.1■□□□□ 0.17
SMIM12-203ENST00000426886 A0A0G2JLW4 131 aa16.09■□□□□ 0.17
SMIM12-203ENST00000426886 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
SMIM12-203ENST00000426886 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
SMIM12-203ENST00000426886 CD2APQ9Y5K6 639 aa16.09■□□□□ 0.17
SMIM12-203ENST00000426886 ATP5J2-PTCD1G3V325 749 aa16.08■□□□□ 0.17
SMIM12-203ENST00000426886 BCL2L13Q9BXK5 485 aa16.08■□□□□ 0.17
SMIM12-203ENST00000426886 CARMIL3Q8ND23 1372 aa16.08■□□□□ 0.16
SMIM12-203ENST00000426886 NUTM1Q86Y26 1132 aa16.08■□□□□ 0.16
SMIM12-203ENST00000426886 CNBD1Q8NA66 436 aa16.08■□□□□ 0.16
SMIM12-203ENST00000426886 YTHDC1Q96MU7 727 aaKnown RBP16.08■□□□□ 0.16
SMIM12-203ENST00000426886 PRR5LQ6MZQ0 368 aa16.07■□□□□ 0.16
SMIM12-203ENST00000426886 PLBD2Q8NHP8 589 aa16.07■□□□□ 0.16
SMIM12-203ENST00000426886 CHRNA5P30532 468 aa16.07■□□□□ 0.16
SMIM12-203ENST00000426886 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
SMIM12-203ENST00000426886 SUSD4Q5VX71 490 aa16.06■□□□□ 0.16
SMIM12-203ENST00000426886 TRMT2AQ8IZ69 625 aaKnown RBP16.06■□□□□ 0.16
SMIM12-203ENST00000426886 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
SMIM12-203ENST00000426886 TPTE2Q6XPS3 522 aa16.06■□□□□ 0.16
SMIM12-203ENST00000426886 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
SMIM12-203ENST00000426886 DPEP1P16444 411 aa16.05■□□□□ 0.16
SMIM12-203ENST00000426886 FLIIQ13045 1269 aa16.05■□□□□ 0.16
SMIM12-203ENST00000426886 FKBP5Q13451 457 aaPredicted RBP16.05■□□□□ 0.16
SMIM12-203ENST00000426886 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
SMIM12-203ENST00000426886 RTL5Q5HYW3 569 aaPredicted RBP16.05■□□□□ 0.16
SMIM12-203ENST00000426886 ZNF34Q8IZ26 560 aa16.05■□□□□ 0.16
SMIM12-203ENST00000426886 GPR162Q16538 588 aa16.05■□□□□ 0.16
SMIM12-203ENST00000426886 MAP3K2Q9Y2U5 619 aa16.05■□□□□ 0.16
SMIM12-203ENST00000426886 COL24A1Q17RW2 1714 aa16.05■□□□□ 0.16
SMIM12-203ENST00000426886 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
SMIM12-203ENST00000426886 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
SMIM12-203ENST00000426886 MYD88Q99836 296 aa16.04■□□□□ 0.16
SMIM12-203ENST00000426886 ST5P78524 1137 aa16.04■□□□□ 0.16
SMIM12-203ENST00000426886 SYNE4Q8N205 404 aa16.03■□□□□ 0.16
SMIM12-203ENST00000426886 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
SMIM12-203ENST00000426886 ERFEQ4G0M1 354 aa16.03■□□□□ 0.16
SMIM12-203ENST00000426886 HSP90AB3PQ58FF7 597 aa16.03■□□□□ 0.16
SMIM12-203ENST00000426886 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
SMIM12-203ENST00000426886 SSH1Q8WYL5 1049 aa16.03■□□□□ 0.16
SMIM12-203ENST00000426886 C10orf71Q711Q0 1435 aa16.03■□□□□ 0.16
SMIM12-203ENST00000426886 F6X3S4 739 aa16.02■□□□□ 0.16
SMIM12-203ENST00000426886 TGFB2P61812 414 aa16.02■□□□□ 0.16
SMIM12-203ENST00000426886 KSR2Q6VAB6 950 aa16.02■□□□□ 0.16
SMIM12-203ENST00000426886 JARID2Q92833 1246 aaPredicted RBP16.02■□□□□ 0.15
SMIM12-203ENST00000426886 TRMT112Q9UI30 125 aaKnown RBP16.02■□□□□ 0.15
SMIM12-203ENST00000426886 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 RGL2O15211 777 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 PPP1R42Q7Z4L9 355 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 C2CD5Q86YS7 1000 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 UTP14AQ9BVJ6 771 aaKnown RBP16.01■□□□□ 0.15
SMIM12-203ENST00000426886 ATP10DQ9P241 1426 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 PARP10Q53GL7 1025 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 ZNF622Q969S3 477 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMIM12-203ENST00000426886 BRIP1Q9BX63 1249 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 NYXQ9GZU5 481 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 BCS1LQ9Y276 419 aa16.01■□□□□ 0.15
SMIM12-203ENST00000426886 FAM89AQ96GI7 184 aa16■□□□□ 0.15
SMIM12-203ENST00000426886 SMC4Q9NTJ3 1288 aa16■□□□□ 0.15
SMIM12-203ENST00000426886 NUP98P52948 1817 aa16■□□□□ 0.15
SMIM12-203ENST00000426886 H0YIN7 160 aa16■□□□□ 0.15
SMIM12-203ENST00000426886 NTSR2O95665 410 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms