RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 CTAGE5O15320 804 aa22.99■■□□□ 1.27
HCG18-235ENST00000426882 RRP9O43818 475 aaKnown RBP22.99■■□□□ 1.27
HCG18-235ENST00000426882 DEF6Q9H4E7 631 aa22.99■■□□□ 1.27
HCG18-235ENST00000426882 FSIP1Q8NA03 581 aa22.99■■□□□ 1.27
HCG18-235ENST00000426882 ZNF652Q9Y2D9 606 aa22.99■■□□□ 1.27
HCG18-235ENST00000426882 CHRNA2Q15822 529 aa22.98■■□□□ 1.27
HCG18-235ENST00000426882 ZFYVE9O95405 1425 aa22.98■■□□□ 1.27
HCG18-235ENST00000426882 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
HCG18-235ENST00000426882 CAVIN4Q5BKX8 364 aa22.98■■□□□ 1.27
HCG18-235ENST00000426882 LDHAL6AQ6ZMR3 332 aa22.98■■□□□ 1.27
HCG18-235ENST00000426882 NECAB1Q8N987 351 aa22.98■■□□□ 1.27
HCG18-235ENST00000426882 ZSCAN22P10073 491 aaPredicted RBP22.98■■□□□ 1.27
HCG18-235ENST00000426882 TANGO6Q9C0B7 1094 aa22.98■■□□□ 1.27
HCG18-235ENST00000426882 CLIP2Q9UDT6 1046 aa22.98■■□□□ 1.27
HCG18-235ENST00000426882 ALDH1L1O75891 902 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 XRCC6P12956 609 aaKnown RBP eCLIP22.97■■□□□ 1.271e-10■■■■■ 44.1
HCG18-235ENST00000426882 SLC12A7Q9Y666 1083 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 FLT4P35916 1363 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 DDX46Q7L014 1031 aaKnown RBP22.97■■□□□ 1.27
HCG18-235ENST00000426882 PLEKHM2Q8IWE5 1019 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 XAGE3Q8WTP9 111 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 ABCC1P33527 1531 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 SLC5A1P13866 664 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 PTPN14Q15678 1187 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 KLHL34Q8N239 644 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 SSBP05455 408 aaKnown RBP eCLIP22.97■■□□□ 1.27
HCG18-235ENST00000426882 HAND2P61296 217 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 TCEANC2Q96MN5 208 aa22.97■■□□□ 1.27
HCG18-235ENST00000426882 RNF123Q5XPI4 1314 aa22.96■■□□□ 1.27
HCG18-235ENST00000426882 IFIT3O14879 490 aaKnown RBP22.96■■□□□ 1.27
HCG18-235ENST00000426882 ADCY5O95622 1261 aa22.96■■□□□ 1.27
HCG18-235ENST00000426882 USP16Q9Y5T5 823 aa22.96■■□□□ 1.27
HCG18-235ENST00000426882 PPFIA3O75145 1194 aa22.96■■□□□ 1.27
HCG18-235ENST00000426882 COPS6Q7L5N1 327 aa22.96■■□□□ 1.27
HCG18-235ENST00000426882 NCKAP5LQ9HCH0 1330 aa22.96■■□□□ 1.27
HCG18-235ENST00000426882 GRM8O00222 908 aa22.96■■□□□ 1.27
HCG18-235ENST00000426882 ODF2Q5BJF6 829 aa22.96■■□□□ 1.27
HCG18-235ENST00000426882 KSR2Q6VAB6 950 aa22.96■■□□□ 1.27
HCG18-235ENST00000426882 GOLGA8AA7E2F4 631 aa22.95■■□□□ 1.26
HCG18-235ENST00000426882 SLC39A6Q13433 755 aa22.95■■□□□ 1.26
HCG18-235ENST00000426882 RBM8AQ9Y5S9 174 aaKnown RBP22.95■■□□□ 1.26
HCG18-235ENST00000426882 ZBTB7BO15156 539 aaPredicted RBP22.95■■□□□ 1.26
HCG18-235ENST00000426882 HCLS1P14317 486 aaPredicted RBP22.95■■□□□ 1.26
HCG18-235ENST00000426882 BRF1Q92994 677 aa22.95■■□□□ 1.26
HCG18-235ENST00000426882 AKAP4Q5JQC9 854 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 ZFYVE27Q5T4F4 411 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 LRSAM1Q6UWE0 723 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 LUC7LQ9NQ29 371 aaKnown RBP22.94■■□□□ 1.26
HCG18-235ENST00000426882 PDCL2Q8N4E4 241 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 KDM2BQ8NHM5 1336 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 CCDC66A2RUB6 948 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 EYA1Q99502 592 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 ZMYM4Q5VZL5 1548 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 ZNF165P49910 485 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 KLHL10Q6JEL2 608 aa22.94■■□□□ 1.26
HCG18-235ENST00000426882 ORC3Q9UBD5 711 aaPredicted RBP22.94■■□□□ 1.26
HCG18-235ENST00000426882 YTHDC2Q9H6S0 1430 aaKnown RBP22.94■■□□□ 1.26
HCG18-235ENST00000426882 RANBP6O60518 1105 aaKnown RBP22.93■■□□□ 1.26
HCG18-235ENST00000426882 PANK2Q9BZ23 570 aa22.93■■□□□ 1.26
HCG18-235ENST00000426882 BMP2KQ9NSY1 1161 aaPredicted RBP22.93■■□□□ 1.26
HCG18-235ENST00000426882 KIF2AO00139 706 aaPredicted RBP22.93■■□□□ 1.26
HCG18-235ENST00000426882 EPB41L2O43491 1005 aaKnown RBP22.93■■□□□ 1.26
HCG18-235ENST00000426882 CTCFLQ8NI51 663 aaPredicted RBP22.93■■□□□ 1.26
HCG18-235ENST00000426882 UBXN4Q92575 508 aa22.93■■□□□ 1.26
HCG18-235ENST00000426882 ARHGAP29Q52LW3 1261 aa22.93■■□□□ 1.26
HCG18-235ENST00000426882 NOM1Q5C9Z4 860 aaKnown RBP22.93■■□□□ 1.26
HCG18-235ENST00000426882 AXDND1Q5T1B0 1012 aaPredicted RBP22.93■■□□□ 1.26
HCG18-235ENST00000426882 PATL2C9JE40 543 aaKnown RBP22.92■■□□□ 1.26
HCG18-235ENST00000426882 GIMAP6Q6P9H5 292 aa22.92■■□□□ 1.26
HCG18-235ENST00000426882 IQCA1Q86XH1 822 aa22.92■■□□□ 1.26
HCG18-235ENST00000426882 RNF41Q9H4P4 317 aaPredicted RBP22.92■■□□□ 1.26
HCG18-235ENST00000426882 CWC15Q9P013 229 aaKnown RBP22.92■■□□□ 1.26
HCG18-235ENST00000426882 PRM3Q9NNZ6 103 aa22.92■■□□□ 1.26
HCG18-235ENST00000426882 PA2G4Q9UQ80 394 aaKnown RBP22.92■■□□□ 1.26
HCG18-235ENST00000426882 TEX13AQ9BXU3 409 aaPredicted RBP22.92■■□□□ 1.26
HCG18-235ENST00000426882 ERLIN1O75477 346 aa22.92■■□□□ 1.26
HCG18-235ENST00000426882 USP5P45974 858 aa22.91■■□□□ 1.26
HCG18-235ENST00000426882 RBM5P52756 815 aaKnown RBP eCLIP22.91■■□□□ 1.26
HCG18-235ENST00000426882 EIF5P55010 431 aaKnown RBP22.91■■□□□ 1.26
HCG18-235ENST00000426882 RAB3GAP1Q15042 981 aa22.91■■□□□ 1.26
HCG18-235ENST00000426882 CNPY2Q9Y2B0 182 aa22.91■■□□□ 1.26
HCG18-235ENST00000426882 SSRP1Q08945 709 aaKnown RBP22.91■■□□□ 1.26
HCG18-235ENST00000426882 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
HCG18-235ENST00000426882 MCM5P33992 734 aa22.91■■□□□ 1.26
HCG18-235ENST00000426882 BIN1O00499 593 aa22.91■■□□□ 1.26
HCG18-235ENST00000426882 UVSSAQ2YD98 709 aa22.91■■□□□ 1.26
HCG18-235ENST00000426882 RAB11FIP4Q86YS3 637 aa22.91■■□□□ 1.26
HCG18-235ENST00000426882 CNNM3Q8NE01 707 aa22.91■■□□□ 1.26
HCG18-235ENST00000426882 MKNK2Q9HBH9 465 aa22.91■■□□□ 1.26
HCG18-235ENST00000426882 POLR3DP05423 398 aaPredicted RBP22.9■■□□□ 1.26
HCG18-235ENST00000426882 CCDC181Q5TID7 509 aa22.9■■□□□ 1.26
HCG18-235ENST00000426882 ZSCAN29Q8IWY8 852 aaPredicted RBP22.9■■□□□ 1.26
HCG18-235ENST00000426882 LINS1Q8NG48 757 aa22.9■■□□□ 1.26
HCG18-235ENST00000426882 LRRC59Q96AG4 307 aaKnown RBP22.9■■□□□ 1.26
HCG18-235ENST00000426882 IARSP41252 1262 aaKnown RBP22.9■■□□□ 1.26
HCG18-235ENST00000426882 KIF18AQ8NI77 898 aa22.9■■□□□ 1.26
HCG18-235ENST00000426882 TOP1P11387 765 aaKnown RBP22.9■■□□□ 1.26
HCG18-235ENST00000426882 TTF1Q15361 905 aaPredicted RBP22.9■■□□□ 1.26
HCG18-235ENST00000426882 USP48Q86UV5 1035 aa22.9■■□□□ 1.26
HCG18-235ENST00000426882 MICU3Q86XE3 530 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms