RNA–Protein interactions for RNA: ENST00000426501.5

HERC2P3-204, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene HERC2P3, Length 5,995 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-204ENST00000426501 PRC1O43663 620 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 CCDC175P0C221 793 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 CCDC174Q6PII3 467 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 NSD3Q9BZ95 1437 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 NEMFO60524 1076 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 URI1O94763 535 aaPredicted RBP13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 TMCO5BA8MYB1 307 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 PPP4R3BQ5MIZ7 849 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 KANK3Q6NY19 840 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 DDX46Q7L014 1031 aaKnown RBP13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 SAMM50Q9Y512 469 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 ABCC11Q96J66 1382 aa13.62□□□□□ -0.23
HERC2P3-204ENST00000426501 EXOC5O00471 708 aa13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 GSTO1P78417 241 aa13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 IFI16Q16666 785 aaKnown RBP13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 USP37Q86T82 979 aa13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 SREK1Q8WXA9 508 aaKnown RBP13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 BCCIPQ9P287 314 aaKnown RBP eCLIP13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 DNAAF4Q8WXU2 420 aa13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 MCM10Q7L590 875 aa13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 CCDC82Q8N4S0 544 aa13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 CLIP2Q9UDT6 1046 aa13.61□□□□□ -0.23
HERC2P3-204ENST00000426501 LMAN1P49257 510 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 EHBP1L1Q8N3D4 1523 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 DBF4Q9UBU7 674 aaPredicted RBP13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 BRPF3Q9ULD4 1205 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 TBCAO75347 108 aaKnown RBP13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 TNNT1P13805 278 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 DNA2P51530 1060 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 GSDMDP57764 484 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 ERMNQ8TAM6 284 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 BBXQ8WY36 941 aaPredicted RBP13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 BICD1Q96G01 975 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 UTP14AQ9BVJ6 771 aaKnown RBP13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 DDX19AQ9NUU7 478 aaKnown RBP13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 PUF60Q9UHX1 559 aaKnown RBP13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 IKBKGQ9Y6K9 419 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 TSPY2A6NKD2 308 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.231e-6■■■□□ 15.7
HERC2P3-204ENST00000426501 C6orf163Q5TEZ5 329 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 PLVAPQ9BX97 442 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 GOLGA6L9A6NEM1 432 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 STX6O43752 255 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 IDEP14735 1019 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 EVI5LQ96CN4 794 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 NGLY1Q96IV0 654 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 LIMCH1Q9UPQ0 1083 aa13.6□□□□□ -0.23
HERC2P3-204ENST00000426501 IARSP41252 1262 aaKnown RBP13.59□□□□□ -0.23
HERC2P3-204ENST00000426501 ST5P78524 1137 aa13.59□□□□□ -0.23
HERC2P3-204ENST00000426501 SPECC1LQ69YQ0 1117 aa13.59□□□□□ -0.23
HERC2P3-204ENST00000426501 ADAMTS2O95450 1211 aa13.59□□□□□ -0.23
HERC2P3-204ENST00000426501 ERICH4A6NGS2 130 aa13.59□□□□□ -0.23
HERC2P3-204ENST00000426501 ESPNB1AK53 854 aa13.59□□□□□ -0.23
HERC2P3-204ENST00000426501 CCDC8Q9H0W5 538 aaPredicted RBP13.59□□□□□ -0.23
HERC2P3-204ENST00000426501 UBA7P41226 1012 aa13.58□□□□□ -0.23
HERC2P3-204ENST00000426501 GUCY1B3Q02153 619 aa13.58□□□□□ -0.23
HERC2P3-204ENST00000426501 TMEM67Q5HYA8 995 aa13.58□□□□□ -0.23
HERC2P3-204ENST00000426501 ZSCAN30Q86W11 494 aa13.58□□□□□ -0.23
HERC2P3-204ENST00000426501 PSMD1Q99460 953 aa13.58□□□□□ -0.23
HERC2P3-204ENST00000426501 PRPF4BQ13523 1007 aaKnown RBP13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 FSIP1Q8NA03 581 aa13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 CPLX3Q8WVH0 158 aa13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 TBC1D5Q92609 795 aa13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 GOLIM4O00461 696 aa13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 NOP2P46087 812 aaKnown RBP13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 EHBP1Q8NDI1 1231 aa13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 SLFN5Q08AF3 891 aa13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 MFSD6Q6ZSS7 791 aa13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 DDX23Q9BUQ8 820 aaKnown RBP13.58□□□□□ -0.24
HERC2P3-204ENST00000426501 SPATA24Q86W54 205 aa13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 CRNKL1Q9BZJ0 848 aaKnown RBP13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 RMND1Q9NWS8 449 aa13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 AKNAQ7Z591 1439 aa13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 MRPS9P82933 396 aaKnown RBP13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 STX1AQ16623 288 aa13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 PPP1R14CQ8TAE6 165 aa13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 SMARCA5O60264 1052 aaPredicted RBP13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 CGNQ9P2M7 1197 aaKnown RBP13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 CFTRP13569 1480 aa13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 RNF187Q5TA31 235 aaPredicted RBP13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 SYNCQ9H7C4 482 aa13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 HDAC9Q9UKV0 1011 aa13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 CWC25Q9NXE8 425 aaPredicted RBP13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
HERC2P3-204ENST00000426501 PTPRCP08575 1304 aa13.56□□□□□ -0.24
HERC2P3-204ENST00000426501 UQCRFS1P1P0C7P4 283 aa13.56□□□□□ -0.24
HERC2P3-204ENST00000426501 CA8P35219 290 aa13.56□□□□□ -0.24
HERC2P3-204ENST00000426501 TTC12Q9H892 705 aaPredicted RBP13.56□□□□□ -0.24
HERC2P3-204ENST00000426501 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
HERC2P3-204ENST00000426501 NBPF7P0C2Y1 421 aaPredicted RBP13.56□□□□□ -0.24
HERC2P3-204ENST00000426501 RFC4P35249 363 aa13.56□□□□□ -0.24
HERC2P3-204ENST00000426501 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■□□□ 13.1
HERC2P3-204ENST00000426501 RAPGEF3O95398 923 aa13.56□□□□□ -0.24
HERC2P3-204ENST00000426501 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms