RNA–Protein interactions for RNA: ENST00000426471.6

LINC00993-202, long intergenic non-protein coding RNA 993, humanhuman

TSL 2

Gene LINC00993, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-202ENST00000426471 SUV39H2Q9H5I1 410 aa9.59□□□□□ -0.87
LINC00993-202ENST00000426471 STRN4Q9NRL3 753 aa9.59□□□□□ -0.87
LINC00993-202ENST00000426471 NOP53Q9NZM5 478 aaKnown RBP9.59□□□□□ -0.87
LINC00993-202ENST00000426471 KRBA1A5PL33 1030 aa9.58□□□□□ -0.88
LINC00993-202ENST00000426471 EML1O00423 815 aa9.58□□□□□ -0.88
LINC00993-202ENST00000426471 ALAS2P22557 587 aa9.58□□□□□ -0.88
LINC00993-202ENST00000426471 SH3PXD2AQ5TCZ1 1133 aa9.58□□□□□ -0.88
LINC00993-202ENST00000426471 LINC00114Q6XXX2 140 aa9.58□□□□□ -0.88
LINC00993-202ENST00000426471 FCHSD1Q86WN1 690 aa9.58□□□□□ -0.88
LINC00993-202ENST00000426471 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
LINC00993-202ENST00000426471 HCN4Q9Y3Q4 1203 aa9.58□□□□□ -0.88
LINC00993-202ENST00000426471 GPC6Q9Y625 555 aaPredicted RBP9.58□□□□□ -0.88
LINC00993-202ENST00000426471 PPP1R12BO60237 982 aaPredicted RBP9.57□□□□□ -0.88
LINC00993-202ENST00000426471 COL8A1P27658 744 aa9.57□□□□□ -0.88
LINC00993-202ENST00000426471 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
LINC00993-202ENST00000426471 GLMNQ92990 594 aa9.57□□□□□ -0.88
LINC00993-202ENST00000426471 KLF15Q9UIH9 416 aa9.57□□□□□ -0.88
LINC00993-202ENST00000426471 HCN2Q9UL51 889 aa9.57□□□□□ -0.88
LINC00993-202ENST00000426471 SFI1A8K8P3 1242 aa9.56□□□□□ -0.88
LINC00993-202ENST00000426471 EFSO43281 561 aa9.56□□□□□ -0.88
LINC00993-202ENST00000426471 RASA1P20936 1047 aa9.56□□□□□ -0.88
LINC00993-202ENST00000426471 DGKGP49619 791 aa9.56□□□□□ -0.88
LINC00993-202ENST00000426471 TSEN2Q8NCE0 465 aaKnown RBP9.56□□□□□ -0.88
LINC00993-202ENST00000426471 CEP63Q96MT8 703 aa9.56□□□□□ -0.88
LINC00993-202ENST00000426471 ANKIB1Q9P2G1 1089 aa9.56□□□□□ -0.88
LINC00993-202ENST00000426471 ITGB2P05107 769 aa9.55□□□□□ -0.88
LINC00993-202ENST00000426471 HOXB4P17483 251 aaPredicted RBP9.55□□□□□ -0.88
LINC00993-202ENST00000426471 NEUROD1Q13562 356 aa9.55□□□□□ -0.88
LINC00993-202ENST00000426471 SYT9Q86SS6 491 aa9.55□□□□□ -0.88
LINC00993-202ENST00000426471 PHACTR1Q9C0D0 580 aa9.55□□□□□ -0.88
LINC00993-202ENST00000426471 TFIP11Q9UBB9 837 aaKnown RBP9.55□□□□□ -0.88
LINC00993-202ENST00000426471 M0R2N6 131 aa9.54□□□□□ -0.88
LINC00993-202ENST00000426471 PROCP04070 461 aa9.54□□□□□ -0.88
LINC00993-202ENST00000426471 C1orf53Q5VUE5 145 aa9.54□□□□□ -0.88
LINC00993-202ENST00000426471 LARP1Q6PKG0 1096 aaKnown RBP9.54□□□□□ -0.88
LINC00993-202ENST00000426471 SIX5Q8N196 739 aa9.54□□□□□ -0.88
LINC00993-202ENST00000426471 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
LINC00993-202ENST00000426471 ELOA3CA0A087WX78 387 aaPredicted RBP9.53□□□□□ -0.88
LINC00993-202ENST00000426471 LOC100996750A0A140TA64 210 aa9.53□□□□□ -0.88
LINC00993-202ENST00000426471 ELOA3DA6NLF2 546 aaPredicted RBP9.53□□□□□ -0.88
LINC00993-202ENST00000426471 SFSWAPQ12872 951 aaKnown RBP9.53□□□□□ -0.88
LINC00993-202ENST00000426471 ELOA3BQ3SY89 546 aa9.53□□□□□ -0.88
LINC00993-202ENST00000426471 ELOA3Q8NG57 546 aa9.53□□□□□ -0.88
LINC00993-202ENST00000426471 HSH2DQ96JZ2 352 aa9.53□□□□□ -0.88
LINC00993-202ENST00000426471 CALR3Q96L12 384 aaKnown RBP9.53□□□□□ -0.88
LINC00993-202ENST00000426471 KRTAP4-6Q9BYQ5 205 aa9.53□□□□□ -0.88
LINC00993-202ENST00000426471 SEC13P55735 322 aa9.52□□□□□ -0.89
LINC00993-202ENST00000426471 NGLY1Q96IV0 654 aa9.52□□□□□ -0.89
LINC00993-202ENST00000426471 BRD7Q9NPI1 651 aa9.52□□□□□ -0.89
LINC00993-202ENST00000426471 SPEM2Q0P670 501 aa9.51□□□□□ -0.89
LINC00993-202ENST00000426471 SCG3Q8WXD2 468 aaKnown RBP9.51□□□□□ -0.89
LINC00993-202ENST00000426471 HINFPQ9BQA5 517 aa9.51□□□□□ -0.89
LINC00993-202ENST00000426471 MAFBQ9Y5Q3 323 aaPredicted RBP9.51□□□□□ -0.89
LINC00993-202ENST00000426471 SIN3BO75182 1162 aa9.5□□□□□ -0.89
LINC00993-202ENST00000426471 BAG6P46379 1132 aa9.5□□□□□ -0.89
LINC00993-202ENST00000426471 HIRAP54198 1017 aaPredicted RBP9.5□□□□□ -0.89
LINC00993-202ENST00000426471 SUSD3Q96L08 255 aa9.5□□□□□ -0.89
LINC00993-202ENST00000426471 SLC30A3Q99726 388 aa9.5□□□□□ -0.89
LINC00993-202ENST00000426471 PLVAPQ9BX97 442 aa9.5□□□□□ -0.89
LINC00993-202ENST00000426471 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
LINC00993-202ENST00000426471 SPDYE3A6NKU9 549 aa9.49□□□□□ -0.89
LINC00993-202ENST00000426471 C1QTNF9BB2RNN3 333 aa9.49□□□□□ -0.89
LINC00993-202ENST00000426471 ADAM23O75077 832 aa9.49□□□□□ -0.89
LINC00993-202ENST00000426471 RAB44Q7Z6P3 723 aaPredicted RBP9.49□□□□□ -0.89
LINC00993-202ENST00000426471 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
LINC00993-202ENST00000426471 KCNH4Q9UQ05 1017 aa9.49□□□□□ -0.89
LINC00993-202ENST00000426471 K7ELQ4 463 aaPredicted RBP9.48□□□□□ -0.89
LINC00993-202ENST00000426471 HIF1AQ16665 826 aa9.48□□□□□ -0.89
LINC00993-202ENST00000426471 ALDH16A1Q8IZ83 802 aa9.48□□□□□ -0.89
LINC00993-202ENST00000426471 C7orf43Q8WVR3 580 aa9.48□□□□□ -0.89
LINC00993-202ENST00000426471 TBC1D8BQ0IIM8 1120 aa9.47□□□□□ -0.89
LINC00993-202ENST00000426471 ZNF280CQ8ND82 737 aa9.47□□□□□ -0.89
LINC00993-202ENST00000426471 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
LINC00993-202ENST00000426471 TYRO3Q06418 890 aa9.46□□□□□ -0.9
LINC00993-202ENST00000426471 PRRT3Q5FWE3 981 aa9.46□□□□□ -0.9
LINC00993-202ENST00000426471 CD163Q86VB7 1156 aa9.46□□□□□ -0.9
LINC00993-202ENST00000426471 TRIM11Q96F44 468 aa9.46□□□□□ -0.9
LINC00993-202ENST00000426471 PPP1R12CQ9BZL4 782 aa9.46□□□□□ -0.9
LINC00993-202ENST00000426471 ADARB2-AS1A8MUL3 147 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 M0R082 166 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 C21orf2O43822 256 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 LGR5O75473 907 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 FURINP09958 794 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
LINC00993-202ENST00000426471 ADH7P40394 386 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 DPYDQ12882 1025 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 ZNF417Q8TAU3 575 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 BHMTQ93088 406 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 ZNF587Q96SQ5 575 aaPredicted RBP9.45□□□□□ -0.9
LINC00993-202ENST00000426471 C2orf49Q9BVC5 232 aaPredicted RBP9.45□□□□□ -0.9
LINC00993-202ENST00000426471 IGFLR1Q9H665 355 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 VRTNQ9H8Y1 702 aa9.45□□□□□ -0.9
LINC00993-202ENST00000426471 DKK1O94907 266 aa9.44□□□□□ -0.9
LINC00993-202ENST00000426471 SPATA31C1P0DKV0 1188 aa9.44□□□□□ -0.9
LINC00993-202ENST00000426471 CHRNA4P43681 627 aa9.44□□□□□ -0.9
LINC00993-202ENST00000426471 CRTC2Q53ET0 693 aaPredicted RBP9.44□□□□□ -0.9
LINC00993-202ENST00000426471 POTEAQ6S8J7 498 aa9.44□□□□□ -0.9
LINC00993-202ENST00000426471 STAG2Q8N3U4 1231 aa9.44□□□□□ -0.9
LINC00993-202ENST00000426471 TNFRSF25Q93038 417 aa9.44□□□□□ -0.9
LINC00993-202ENST00000426471 A6NJR5 290 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms