RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 PRAMEF22A3QJZ6 481 aa19.19■□□□□ 0.66
PKP4-205ENST00000426248 EXOC6BQ9Y2D4 811 aa19.19■□□□□ 0.66
PKP4-205ENST00000426248 SOS2Q07890 1332 aaPredicted RBP19.18■□□□□ 0.66
PKP4-205ENST00000426248 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
PKP4-205ENST00000426248 COPS6Q7L5N1 327 aa19.18■□□□□ 0.66
PKP4-205ENST00000426248 CERS3Q8IU89 383 aa19.18■□□□□ 0.66
PKP4-205ENST00000426248 ZBTB3Q9H5J0 574 aa19.18■□□□□ 0.66
PKP4-205ENST00000426248 ATP2B3Q16720 1220 aa19.18■□□□□ 0.66
PKP4-205ENST00000426248 ATP5J2-PTCD1G3V325 749 aa19.17■□□□□ 0.66
PKP4-205ENST00000426248 CYP27B1O15528 508 aa19.17■□□□□ 0.66
PKP4-205ENST00000426248 TAF3Q5VWG9 929 aa19.17■□□□□ 0.66
PKP4-205ENST00000426248 CASC1Q6TDU7 716 aa19.17■□□□□ 0.66
PKP4-205ENST00000426248 MYD88Q99836 296 aa19.17■□□□□ 0.66
PKP4-205ENST00000426248 CARD10Q9BWT7 1032 aa19.17■□□□□ 0.66
PKP4-205ENST00000426248 LRRFIP2Q9Y608 721 aaKnown RBP19.17■□□□□ 0.66
PKP4-205ENST00000426248 ADGRB2O60241 1585 aa19.17■□□□□ 0.66
PKP4-205ENST00000426248 HS1BP3Q53T59 392 aa19.17■□□□□ 0.66
PKP4-205ENST00000426248 XAGE3Q8WTP9 111 aa19.17■□□□□ 0.66
PKP4-205ENST00000426248 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
PKP4-205ENST00000426248 HYPKQ9NX55 129 aa19.16■□□□□ 0.66
PKP4-205ENST00000426248 XRN1Q8IZH2 1706 aaKnown RBP19.15■□□□□ 0.66
PKP4-205ENST00000426248 DCCP43146 1447 aa19.15■□□□□ 0.66
PKP4-205ENST00000426248 MYRIPQ8NFW9 859 aa19.15■□□□□ 0.66
PKP4-205ENST00000426248 ZBTB40Q9NUA8 1239 aa19.15■□□□□ 0.66
PKP4-205ENST00000426248 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■□□□ 11.4
PKP4-205ENST00000426248 KDRP35968 1356 aa19.15■□□□□ 0.66
PKP4-205ENST00000426248 RILPL2Q969X0 211 aa19.15■□□□□ 0.66
PKP4-205ENST00000426248 TTC12Q9H892 705 aaPredicted RBP19.15■□□□□ 0.66
PKP4-205ENST00000426248 NCOA3Q9Y6Q9 1424 aa19.14■□□□□ 0.66
PKP4-205ENST00000426248 SMARCA5O60264 1052 aaPredicted RBP19.14■□□□□ 0.65
PKP4-205ENST00000426248 STARD3NLO95772 234 aa19.14■□□□□ 0.65
PKP4-205ENST00000426248 NUCB2P80303 420 aa19.14■□□□□ 0.65
PKP4-205ENST00000426248 SIL1Q9H173 461 aa19.14■□□□□ 0.65
PKP4-205ENST00000426248 SMC5Q8IY18 1101 aa19.14■□□□□ 0.65
PKP4-205ENST00000426248 USP16Q9Y5T5 823 aa19.14■□□□□ 0.65
PKP4-205ENST00000426248 MCM5P33992 734 aa19.14■□□□□ 0.65
PKP4-205ENST00000426248 CCDC85AQ96PX6 553 aaPredicted RBP19.14■□□□□ 0.65
PKP4-205ENST00000426248 IQSEC2Q5JU85 1478 aa19.14■□□□□ 0.65
PKP4-205ENST00000426248 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
PKP4-205ENST00000426248 CCDC66A2RUB6 948 aa19.13■□□□□ 0.65
PKP4-205ENST00000426248 ZBTB7BO15156 539 aaPredicted RBP19.13■□□□□ 0.65
PKP4-205ENST00000426248 GIGYF1O75420 1035 aaPredicted RBP19.13■□□□□ 0.65
PKP4-205ENST00000426248 IL1RAPL2Q9NP60 686 aa19.13■□□□□ 0.65
PKP4-205ENST00000426248 TMEM51Q9NW97 253 aa19.13■□□□□ 0.65
PKP4-205ENST00000426248 CWF19L2Q2TBE0 894 aaKnown RBP19.13■□□□□ 0.65
PKP4-205ENST00000426248 CHD1LQ86WJ1 897 aa19.13■□□□□ 0.65
PKP4-205ENST00000426248 RPAP2Q8IXW5 612 aaPredicted RBP19.13■□□□□ 0.65
PKP4-205ENST00000426248 KIF6Q6ZMV9 814 aa19.12■□□□□ 0.65
PKP4-205ENST00000426248 GCC1Q96CN9 775 aa19.12■□□□□ 0.65
PKP4-205ENST00000426248 ANKRD13DQ6ZTN6 518 aa19.11■□□□□ 0.65
PKP4-205ENST00000426248 ZNF592Q92610 1267 aa19.11■□□□□ 0.65
PKP4-205ENST00000426248 DIAPH3Q9NSV4 1193 aa19.11■□□□□ 0.65
PKP4-205ENST00000426248 NOLC1Q14978 699 aaKnown RBP eCLIP19.11■□□□□ 0.65
PKP4-205ENST00000426248 A1BGP04217 495 aa19.11■□□□□ 0.65
PKP4-205ENST00000426248 G3BP1Q13283 466 aaKnown RBP eCLIP19.11■□□□□ 0.65
PKP4-205ENST00000426248 DRC7Q8IY82 874 aa19.11■□□□□ 0.65
PKP4-205ENST00000426248 TSPY26PQ9H489 355 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 BABAM1Q9NWV8 329 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 NALCNQ8IZF0 1738 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 PRIMPOLQ96LW4 560 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.1■□□□□ 0.652e-8■■□□□ 14.2
PKP4-205ENST00000426248 USP25Q9UHP3 1055 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 SYAP1Q96A49 352 aaPredicted RBP19.1■□□□□ 0.65
PKP4-205ENST00000426248 CHAMP1Q96JM3 812 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 PROSER3Q2NL68 480 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 FAM182BQ5T319 152 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 SPC24Q8NBT2 197 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 USP21Q9UK80 565 aa19.1■□□□□ 0.65
PKP4-205ENST00000426248 BCL2L12Q9HB09 334 aa19.09■□□□□ 0.65
PKP4-205ENST00000426248 ZNF142P52746 1687 aaPredicted RBP19.09■□□□□ 0.65
PKP4-205ENST00000426248 GPTP24298 496 aa19.09■□□□□ 0.65
PKP4-205ENST00000426248 DDX21Q9NR30 783 aaKnown RBP eCLIP19.09■□□□□ 0.65
PKP4-205ENST00000426248 FMN2Q9NZ56 1722 aa19.09■□□□□ 0.65
PKP4-205ENST00000426248 GORABQ5T7V8 394 aa19.08■□□□□ 0.64
PKP4-205ENST00000426248 CD2BP2O95400 341 aaKnown RBP19.08■□□□□ 0.64
PKP4-205ENST00000426248 KSR2Q6VAB6 950 aa19.08■□□□□ 0.64
PKP4-205ENST00000426248 A0A087WZG4 1122 aa19.07■□□□□ 0.64
PKP4-205ENST00000426248 ASAP1Q9ULH1 1129 aa19.07■□□□□ 0.64
PKP4-205ENST00000426248 UBE3BQ7Z3V4 1068 aa19.07■□□□□ 0.64
PKP4-205ENST00000426248 IFIT2P09913 472 aaKnown RBP19.06■□□□□ 0.64
PKP4-205ENST00000426248 INTS3Q68E01 1043 aaKnown RBP19.06■□□□□ 0.64
PKP4-205ENST00000426248 MON2Q7Z3U7 1717 aa19.06■□□□□ 0.64
PKP4-205ENST00000426248 ZNF445P59923 1031 aa19.06■□□□□ 0.64
PKP4-205ENST00000426248 DNAJC10Q8IXB1 793 aa19.06■□□□□ 0.64
PKP4-205ENST00000426248 TULP1O00294 542 aaPredicted RBP19.05■□□□□ 0.64
PKP4-205ENST00000426248 IRX3P78415 501 aaPredicted RBP19.05■□□□□ 0.64
PKP4-205ENST00000426248 PPP1R42Q7Z4L9 355 aa19.05■□□□□ 0.64
PKP4-205ENST00000426248 SNX21Q969T3 373 aa19.05■□□□□ 0.64
PKP4-205ENST00000426248 LRSAM1Q6UWE0 723 aa19.05■□□□□ 0.64
PKP4-205ENST00000426248 TRIM34Q9BYJ4 488 aa19.05■□□□□ 0.64
PKP4-205ENST00000426248 BICDL1Q6ZP65 573 aa19.05■□□□□ 0.64
PKP4-205ENST00000426248 LRRCC1Q9C099 1032 aa19.05■□□□□ 0.64
PKP4-205ENST00000426248 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.05■□□□□ 0.64
PKP4-205ENST00000426248 ATP6V1AP38606 617 aa19.04■□□□□ 0.64
PKP4-205ENST00000426248 SHPRHQ149N8 1683 aa19.04■□□□□ 0.64
PKP4-205ENST00000426248 HDAC1Q13547 482 aaPredicted RBP19.04■□□□□ 0.64
PKP4-205ENST00000426248 CRB1P82279 1406 aa19.04■□□□□ 0.64
PKP4-205ENST00000426248 ZBTB9Q96C00 473 aa19.04■□□□□ 0.64
PKP4-205ENST00000426248 HOXB7P09629 217 aa19.03■□□□□ 0.64
PKP4-205ENST00000426248 CERKQ8TCT0 537 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms