RNA–Protein interactions for RNA: ENST00000425551.1

TUBA4A-204, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-204ENST00000425551 THSD7BQ9C0I4 1608 aa13.48□□□□□ -0.25
TUBA4A-204ENST00000425551 COL15A1P39059 1388 aa13.47□□□□□ -0.25
TUBA4A-204ENST00000425551 CANXP27824 592 aaKnown RBP13.47□□□□□ -0.25
TUBA4A-204ENST00000425551 PRPF40BQ6NWY9 871 aaKnown RBP13.47□□□□□ -0.25
TUBA4A-204ENST00000425551 KIF20BQ96Q89 1820 aa13.46□□□□□ -0.25
TUBA4A-204ENST00000425551 LTBP3Q9NS15 1303 aa13.46□□□□□ -0.25
TUBA4A-204ENST00000425551 EPS15P42566 896 aa13.46□□□□□ -0.25
TUBA4A-204ENST00000425551 MTHFSP49914 203 aa13.46□□□□□ -0.25
TUBA4A-204ENST00000425551 HACL1Q9UJ83 578 aa13.46□□□□□ -0.25
TUBA4A-204ENST00000425551 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
TUBA4A-204ENST00000425551 SZT2Q5T011 3432 aa13.45□□□□□ -0.26
TUBA4A-204ENST00000425551 SCN4AP35499 1836 aa13.45□□□□□ -0.26
TUBA4A-204ENST00000425551 MKI67P46013 3256 aaKnown RBP13.44□□□□□ -0.26
TUBA4A-204ENST00000425551 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
TUBA4A-204ENST00000425551 KIF24Q5T7B8 1368 aa13.44□□□□□ -0.26
TUBA4A-204ENST00000425551 SRGNP10124 158 aa13.43□□□□□ -0.26
TUBA4A-204ENST00000425551 CIAPIN1Q6FI81 312 aa13.43□□□□□ -0.26
TUBA4A-204ENST00000425551 BRIP1Q9BX63 1249 aa13.43□□□□□ -0.26
TUBA4A-204ENST00000425551 IQCA1LA6NCM1 817 aa13.42□□□□□ -0.26
TUBA4A-204ENST00000425551 PIP4K2AP48426 406 aaPredicted RBP13.42□□□□□ -0.26
TUBA4A-204ENST00000425551 EIF5P55010 431 aaKnown RBP13.41□□□□□ -0.26
TUBA4A-204ENST00000425551 TLL2Q9Y6L7 1015 aa13.41□□□□□ -0.26
TUBA4A-204ENST00000425551 FZD9O00144 591 aa13.4□□□□□ -0.26
TUBA4A-204ENST00000425551 SCNN1DP51172 638 aa13.4□□□□□ -0.26
TUBA4A-204ENST00000425551 EIF4G2P78344 907 aaKnown RBP eCLIP13.4□□□□□ -0.26
TUBA4A-204ENST00000425551 PLEKHO1Q53GL0 409 aaPredicted RBP13.4□□□□□ -0.26
TUBA4A-204ENST00000425551 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
TUBA4A-204ENST00000425551 GJA3Q9Y6H8 435 aa13.4□□□□□ -0.26
TUBA4A-204ENST00000425551 SHTN1A0MZ66 631 aa13.39□□□□□ -0.27
TUBA4A-204ENST00000425551 SAPCD2Q86UD0 394 aa13.39□□□□□ -0.27
TUBA4A-204ENST00000425551 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
TUBA4A-204ENST00000425551 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
TUBA4A-204ENST00000425551 PDE6BP35913 854 aa13.38□□□□□ -0.27
TUBA4A-204ENST00000425551 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
TUBA4A-204ENST00000425551 ZNF330Q9Y3S2 320 aaPredicted RBP13.38□□□□□ -0.27
TUBA4A-204ENST00000425551 A1BGP04217 495 aa13.37□□□□□ -0.27
TUBA4A-204ENST00000425551 FKBP4Q02790 459 aaKnown RBP eCLIP13.37□□□□□ -0.27
TUBA4A-204ENST00000425551 STYK1Q6J9G0 422 aa13.37□□□□□ -0.27
TUBA4A-204ENST00000425551 BEGAINQ9BUH8 593 aa13.37□□□□□ -0.27
TUBA4A-204ENST00000425551 SLC52A2Q9HAB3 445 aa13.37□□□□□ -0.27
TUBA4A-204ENST00000425551 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
TUBA4A-204ENST00000425551 CELF2O95319 508 aaKnown RBP13.36□□□□□ -0.27
TUBA4A-204ENST00000425551 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
TUBA4A-204ENST00000425551 HSPA5P11021 654 aaKnown RBP13.36□□□□□ -0.27
TUBA4A-204ENST00000425551 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
TUBA4A-204ENST00000425551 RNMTO43148 476 aaKnown RBP13.35□□□□□ -0.27
TUBA4A-204ENST00000425551 KCNQ3O43525 872 aa13.35□□□□□ -0.27
TUBA4A-204ENST00000425551 MAP2K2P36507 400 aa13.35□□□□□ -0.27
TUBA4A-204ENST00000425551 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
TUBA4A-204ENST00000425551 HIRAP54198 1017 aaPredicted RBP13.35□□□□□ -0.27
TUBA4A-204ENST00000425551 SULT6B1Q6IMI4 303 aa13.35□□□□□ -0.27
TUBA4A-204ENST00000425551 CNKSR1Q969H4 720 aa13.35□□□□□ -0.27
TUBA4A-204ENST00000425551 MASTLQ96GX5 879 aa13.35□□□□□ -0.27
TUBA4A-204ENST00000425551 TRPM7Q96QT4 1865 aa13.34□□□□□ -0.27
TUBA4A-204ENST00000425551 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
TUBA4A-204ENST00000425551 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
TUBA4A-204ENST00000425551 ECE1P42892 770 aa13.34□□□□□ -0.27
TUBA4A-204ENST00000425551 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
TUBA4A-204ENST00000425551 PNMA8AQ86V59 439 aaPredicted RBP13.34□□□□□ -0.27
TUBA4A-204ENST00000425551 GPC2Q8N158 579 aa13.33□□□□□ -0.28
TUBA4A-204ENST00000425551 CNBD1Q8NA66 436 aa13.33□□□□□ -0.28
TUBA4A-204ENST00000425551 ZNF496Q96IT1 587 aaPredicted RBP13.33□□□□□ -0.28
TUBA4A-204ENST00000425551 ZNF408Q9H9D4 720 aa13.33□□□□□ -0.28
TUBA4A-204ENST00000425551 ARFGEF2Q9Y6D5 1785 aa13.32□□□□□ -0.28
TUBA4A-204ENST00000425551 FAM155AB1AL88 458 aaPredicted RBP13.32□□□□□ -0.28
TUBA4A-204ENST00000425551 HABP4Q5JVS0 413 aaKnown RBP13.32□□□□□ -0.28
TUBA4A-204ENST00000425551 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
TUBA4A-204ENST00000425551 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
TUBA4A-204ENST00000425551 TCERG1O14776 1098 aaKnown RBP13.31□□□□□ -0.28
TUBA4A-204ENST00000425551 BRPF1P55201 1214 aaPredicted RBP13.31□□□□□ -0.28
TUBA4A-204ENST00000425551 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
TUBA4A-204ENST00000425551 SCN7AQ01118 1682 aa13.31□□□□□ -0.28
TUBA4A-204ENST00000425551 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
TUBA4A-204ENST00000425551 TRPM4Q8TD43 1214 aa13.3□□□□□ -0.28
TUBA4A-204ENST00000425551 BRCA2P51587 3418 aa13.3□□□□□ -0.28
TUBA4A-204ENST00000425551 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
TUBA4A-204ENST00000425551 TRPA1O75762 1119 aa13.29□□□□□ -0.28
TUBA4A-204ENST00000425551 IL13P35225 146 aa13.29□□□□□ -0.28
TUBA4A-204ENST00000425551 MTHFSDQ2M296 383 aaKnown RBP13.29□□□□□ -0.28
TUBA4A-204ENST00000425551 C3orf67Q6ZVT6 689 aa13.29□□□□□ -0.28
TUBA4A-204ENST00000425551 SETDB2Q96T68 719 aa13.29□□□□□ -0.28
TUBA4A-204ENST00000425551 RNF186Q9NXI6 227 aa13.29□□□□□ -0.28
TUBA4A-204ENST00000425551 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
TUBA4A-204ENST00000425551 TRIOBPQ9H2D6 2365 aa13.28□□□□□ -0.28
TUBA4A-204ENST00000425551 HMOX1P09601 288 aa13.28□□□□□ -0.28
TUBA4A-204ENST00000425551 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
TUBA4A-204ENST00000425551 MRC1P22897 1456 aa13.28□□□□□ -0.28
TUBA4A-204ENST00000425551 CUL9Q8IWT3 2517 aa13.28□□□□□ -0.28
TUBA4A-204ENST00000425551 CEP290O15078 2479 aa13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 EGFRP00533 1210 aa13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 NPR1P16066 1061 aa13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 FXR1P51114 621 aaKnown RBP eCLIP13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 HLFQ16534 295 aa13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 USP48Q86UV5 1035 aa13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 USP16Q9Y5T5 823 aa13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 HTTP42858 3142 aa13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.29
TUBA4A-204ENST00000425551 CENPFP49454 3210 aa13.26□□□□□ -0.29
TUBA4A-204ENST00000425551 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms