RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 DZIP3Q86Y13 1208 aaKnown RBP19.92■□□□□ 0.78
SHOX2-202ENST00000425436 NARFQ9UHQ1 456 aa19.91■□□□□ 0.78
SHOX2-202ENST00000425436 PLIN1O60240 522 aa19.9■□□□□ 0.78
SHOX2-202ENST00000425436 COPS6Q7L5N1 327 aa19.9■□□□□ 0.78
SHOX2-202ENST00000425436 XAGE3Q8WTP9 111 aa19.9■□□□□ 0.78
SHOX2-202ENST00000425436 PHAXQ9H814 394 aaKnown RBP19.9■□□□□ 0.78
SHOX2-202ENST00000425436 USP42Q9H9J4 1324 aaKnown RBP19.9■□□□□ 0.78
SHOX2-202ENST00000425436 SLC4A2P04920 1241 aa19.89■□□□□ 0.77
SHOX2-202ENST00000425436 GYS1P13807 737 aa19.89■□□□□ 0.77
SHOX2-202ENST00000425436 PDE3AQ14432 1141 aa19.89■□□□□ 0.77
SHOX2-202ENST00000425436 SLC16A10Q8TF71 515 aa19.89■□□□□ 0.77
SHOX2-202ENST00000425436 STK31Q9BXU1 1019 aa19.89■□□□□ 0.77
SHOX2-202ENST00000425436 CHMP4AQ9BY43 222 aa19.88■□□□□ 0.77
SHOX2-202ENST00000425436 HYPKQ9NX55 129 aa19.88■□□□□ 0.77
SHOX2-202ENST00000425436 CAMTA2O94983 1202 aa19.87■□□□□ 0.77
SHOX2-202ENST00000425436 G2E3Q7L622 706 aa19.87■□□□□ 0.77
SHOX2-202ENST00000425436 MTFR1LQ9H019 292 aa19.87■□□□□ 0.77
SHOX2-202ENST00000425436 BCL2L12Q9HB09 334 aa19.87■□□□□ 0.77
SHOX2-202ENST00000425436 TSHZ2Q9NRE2 1034 aa19.87■□□□□ 0.77
SHOX2-202ENST00000425436 SRCAPQ6ZRS2 3230 aa19.87■□□□□ 0.77
SHOX2-202ENST00000425436 CRBNQ96SW2 442 aa19.86■□□□□ 0.77
SHOX2-202ENST00000425436 ZBTB3Q9H5J0 574 aa19.86■□□□□ 0.77
SHOX2-202ENST00000425436 RARSP54136 660 aaKnown RBP19.86■□□□□ 0.77
SHOX2-202ENST00000425436 AAMPQ13685 434 aa19.86■□□□□ 0.77
SHOX2-202ENST00000425436 HLFQ16534 295 aa19.86■□□□□ 0.77
SHOX2-202ENST00000425436 KIF6Q6ZMV9 814 aa19.86■□□□□ 0.77
SHOX2-202ENST00000425436 ZNF428Q96B54 188 aa19.85■□□□□ 0.77
SHOX2-202ENST00000425436 BCL2L13Q9BXK5 485 aa19.85■□□□□ 0.77
SHOX2-202ENST00000425436 MS4A1P11836 297 aa19.84■□□□□ 0.77
SHOX2-202ENST00000425436 BICDL1Q6ZP65 573 aa19.84■□□□□ 0.77
SHOX2-202ENST00000425436 NLGN1Q8N2Q7 840 aa19.84■□□□□ 0.77
SHOX2-202ENST00000425436 SSH1Q8WYL5 1049 aa19.84■□□□□ 0.77
SHOX2-202ENST00000425436 SPON1Q9HCB6 807 aa19.84■□□□□ 0.77
SHOX2-202ENST00000425436 MAP3K15Q6ZN16 1313 aa19.84■□□□□ 0.77
SHOX2-202ENST00000425436 BCAR3O75815 825 aa19.83■□□□□ 0.77
SHOX2-202ENST00000425436 CACNA1FO60840 1977 aa19.82■□□□□ 0.76
SHOX2-202ENST00000425436 TBC1D9BQ66K14 1250 aa19.82■□□□□ 0.76
SHOX2-202ENST00000425436 ANKRD13DQ6ZTN6 518 aa19.82■□□□□ 0.76
SHOX2-202ENST00000425436 ERVV-1B6SEH8 477 aa19.81■□□□□ 0.76
SHOX2-202ENST00000425436 MMP10P09238 476 aa19.81■□□□□ 0.76
SHOX2-202ENST00000425436 PTGER2P43116 358 aa19.81■□□□□ 0.76
SHOX2-202ENST00000425436 MRPL50Q8N5N7 158 aaKnown RBP19.81■□□□□ 0.76
SHOX2-202ENST00000425436 NUP98P52948 1817 aa19.81■□□□□ 0.76
SHOX2-202ENST00000425436 BCORQ6W2J9 1755 aa19.81■□□□□ 0.76
SHOX2-202ENST00000425436 SCN7AQ01118 1682 aa19.81■□□□□ 0.76
SHOX2-202ENST00000425436 FLIIQ13045 1269 aa19.81■□□□□ 0.76
SHOX2-202ENST00000425436 NFIXQ14938 502 aa19.81■□□□□ 0.76
SHOX2-202ENST00000425436 TM4SF1P30408 202 aa19.8■□□□□ 0.76
SHOX2-202ENST00000425436 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
SHOX2-202ENST00000425436 PLBD2Q8NHP8 589 aa19.8■□□□□ 0.76
SHOX2-202ENST00000425436 SGIP1Q9BQI5 828 aa19.8■□□□□ 0.76
SHOX2-202ENST00000425436 SMC4Q9NTJ3 1288 aa19.8■□□□□ 0.76
SHOX2-202ENST00000425436 POLD1P28340 1107 aa19.79■□□□□ 0.76
SHOX2-202ENST00000425436 ALDH1L2Q3SY69 923 aa19.79■□□□□ 0.76
SHOX2-202ENST00000425436 C20orf194Q5TEA3 1177 aa19.79■□□□□ 0.76
SHOX2-202ENST00000425436 CLEC4GQ6UXB4 293 aa19.79■□□□□ 0.76
SHOX2-202ENST00000425436 GIGYF2Q6Y7W6 1299 aaKnown RBP19.79■□□□□ 0.76
SHOX2-202ENST00000425436 ZNF652Q9Y2D9 606 aa19.79■□□□□ 0.76
SHOX2-202ENST00000425436 PI4KAP2A4QPH2 592 aa19.78■□□□□ 0.76
SHOX2-202ENST00000425436 GPTP24298 496 aa19.78■□□□□ 0.76
SHOX2-202ENST00000425436 DDR1Q08345 913 aa19.78■□□□□ 0.76
SHOX2-202ENST00000425436 FKBP5Q13451 457 aaPredicted RBP19.78■□□□□ 0.76
SHOX2-202ENST00000425436 PI4KAP1Q8N8J0 262 aa19.78■□□□□ 0.76
SHOX2-202ENST00000425436 COL24A1Q17RW2 1714 aa19.77■□□□□ 0.76
SHOX2-202ENST00000425436 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
SHOX2-202ENST00000425436 SETDB2Q96T68 719 aa19.77■□□□□ 0.76
SHOX2-202ENST00000425436 NIP7Q9Y221 180 aaKnown RBP eCLIP19.77■□□□□ 0.76
SHOX2-202ENST00000425436 MAP3K2Q9Y2U5 619 aa19.77■□□□□ 0.76
SHOX2-202ENST00000425436 FAM177BA6PVY3 158 aa19.76■□□□□ 0.75
SHOX2-202ENST00000425436 KSR2Q6VAB6 950 aa19.76■□□□□ 0.75
SHOX2-202ENST00000425436 PARP3Q9Y6F1 533 aa19.76■□□□□ 0.75
SHOX2-202ENST00000425436 POLRMTO00411 1230 aaKnown RBP19.76■□□□□ 0.75
SHOX2-202ENST00000425436 ADCY9O60503 1353 aa19.75■□□□□ 0.75
SHOX2-202ENST00000425436 ARFGEF2Q9Y6D5 1785 aa19.75■□□□□ 0.75
SHOX2-202ENST00000425436 F6X3S4 739 aa19.75■□□□□ 0.75
SHOX2-202ENST00000425436 ATP5J2-PTCD1G3V325 749 aa19.75■□□□□ 0.75
SHOX2-202ENST00000425436 TCIRG1Q13488 830 aa19.75■□□□□ 0.75
SHOX2-202ENST00000425436 ZNF34Q8IZ26 560 aa19.75■□□□□ 0.75
SHOX2-202ENST00000425436 IPO8O15397 1037 aaKnown RBP19.74■□□□□ 0.75
SHOX2-202ENST00000425436 SERPINB2P05120 415 aa19.74■□□□□ 0.75
SHOX2-202ENST00000425436 MYD88Q99836 296 aa19.74■□□□□ 0.75
SHOX2-202ENST00000425436 NOB1Q9ULX3 412 aaKnown RBP19.74■□□□□ 0.75
SHOX2-202ENST00000425436 RGL2O15211 777 aa19.73■□□□□ 0.75
SHOX2-202ENST00000425436 ZKSCAN2Q63HK3 967 aa19.73■□□□□ 0.75
SHOX2-202ENST00000425436 CENPQQ7L2Z9 268 aaPredicted RBP19.73■□□□□ 0.75
SHOX2-202ENST00000425436 CCDC24Q8N4L8 307 aa19.73■□□□□ 0.75
SHOX2-202ENST00000425436 FRAT1Q92837 279 aaPredicted RBP19.73■□□□□ 0.75
SHOX2-202ENST00000425436 PPP1R1BQ9UD71 204 aaPredicted RBP19.73■□□□□ 0.75
SHOX2-202ENST00000425436 UBN2Q6ZU65 1347 aa19.73■□□□□ 0.75
SHOX2-202ENST00000425436 BRPF1P55201 1214 aaPredicted RBP19.72■□□□□ 0.75
SHOX2-202ENST00000425436 HSP90AB3PQ58FF7 597 aa19.72■□□□□ 0.75
SHOX2-202ENST00000425436 KLHL34Q8N239 644 aa19.72■□□□□ 0.75
SHOX2-202ENST00000425436 METTL22Q9BUU2 404 aaPredicted RBP19.72■□□□□ 0.75
SHOX2-202ENST00000425436 AFDNP55196 1824 aaKnown RBP19.72■□□□□ 0.75
SHOX2-202ENST00000425436 SUSD4Q5VX71 490 aa19.71■□□□□ 0.75
SHOX2-202ENST00000425436 ATP10DQ9P241 1426 aa19.71■□□□□ 0.75
SHOX2-202ENST00000425436 ANKRD36CQ5JPF3 1778 aa19.71■□□□□ 0.75
SHOX2-202ENST00000425436 CARMIL3Q8ND23 1372 aa19.71■□□□□ 0.75
SHOX2-202ENST00000425436 NBPF5PQ86XG9 351 aaPredicted RBP19.71■□□□□ 0.75
SHOX2-202ENST00000425436 DNAAF4Q8WXU2 420 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms