RNA–Protein interactions for RNA: ENST00000424555.5

SEMA3A-203, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-203ENST00000424555 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
SEMA3A-203ENST00000424555 NLRP13Q86W25 1043 aa9.47□□□□□ -0.89
SEMA3A-203ENST00000424555 CHD1O14646 1710 aa9.46□□□□□ -0.89
SEMA3A-203ENST00000424555 CDC14CA4D256 554 aa9.46□□□□□ -0.9
SEMA3A-203ENST00000424555 RFC5P40937 340 aa9.46□□□□□ -0.9
SEMA3A-203ENST00000424555 BRPF1P55201 1214 aaPredicted RBP9.46□□□□□ -0.9
SEMA3A-203ENST00000424555 PDE3BQ13370 1112 aa9.46□□□□□ -0.9
SEMA3A-203ENST00000424555 TRAPPC8Q9Y2L5 1435 aa9.46□□□□□ -0.9
SEMA3A-203ENST00000424555 SUZ12Q15022 739 aaKnown RBP9.45□□□□□ -0.9
SEMA3A-203ENST00000424555 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
SEMA3A-203ENST00000424555 TMEM151AQ8N4L1 468 aa9.45□□□□□ -0.9
SEMA3A-203ENST00000424555 GDF11O95390 407 aa9.44□□□□□ -0.9
SEMA3A-203ENST00000424555 B4GALNT3Q6L9W6 998 aa9.44□□□□□ -0.9
SEMA3A-203ENST00000424555 ABCC1P33527 1531 aa9.44□□□□□ -0.9
SEMA3A-203ENST00000424555 MYO5CQ9NQX4 1742 aa9.44□□□□□ -0.9
SEMA3A-203ENST00000424555 SCAPERQ9BY12 1400 aa9.43□□□□□ -0.9
SEMA3A-203ENST00000424555 DISP3Q9P2K9 1392 aa9.43□□□□□ -0.9
SEMA3A-203ENST00000424555 GAS6Q14393 721 aa9.43□□□□□ -0.9
SEMA3A-203ENST00000424555 SVOPQ8N4V2 548 aa9.43□□□□□ -0.9
SEMA3A-203ENST00000424555 EIF2AK4Q9P2K8 1649 aaKnown RBP9.42□□□□□ -0.9
SEMA3A-203ENST00000424555 NEURL4Q96JN8 1562 aa9.42□□□□□ -0.9
SEMA3A-203ENST00000424555 RGL3Q3MIN7 710 aa9.42□□□□□ -0.9
SEMA3A-203ENST00000424555 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
SEMA3A-203ENST00000424555 CYLDQ9NQC7 956 aa9.42□□□□□ -0.9
SEMA3A-203ENST00000424555 VWDEQ8N2E2 1590 aa9.41□□□□□ -0.9
SEMA3A-203ENST00000424555 GIGYF1O75420 1035 aaPredicted RBP9.41□□□□□ -0.9
SEMA3A-203ENST00000424555 TMF1P82094 1093 aa9.41□□□□□ -0.9
SEMA3A-203ENST00000424555 LYPD4Q6UWN0 246 aa9.41□□□□□ -0.9
SEMA3A-203ENST00000424555 PANK3Q9H999 370 aa9.41□□□□□ -0.9
SEMA3A-203ENST00000424555 ZCCHC11Q5TAX3 1644 aaKnown RBP9.41□□□□□ -0.9
SEMA3A-203ENST00000424555 RNF17Q9BXT8 1623 aaKnown RBP9.41□□□□□ -0.9
SEMA3A-203ENST00000424555 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
SEMA3A-203ENST00000424555 BLMP54132 1417 aaPredicted RBP9.4□□□□□ -0.9
SEMA3A-203ENST00000424555 NPC1L1Q9UHC9 1359 aa9.4□□□□□ -0.9
SEMA3A-203ENST00000424555 SPAG9O60271 1321 aaKnown RBP9.4□□□□□ -0.9
SEMA3A-203ENST00000424555 ADAMTS2O95450 1211 aa9.4□□□□□ -0.9
SEMA3A-203ENST00000424555 RNF144AP50876 292 aaPredicted RBP9.4□□□□□ -0.9
SEMA3A-203ENST00000424555 LYSMD3Q7Z3D4 306 aa9.4□□□□□ -0.9
SEMA3A-203ENST00000424555 PRICKLE2Q7Z3G6 844 aa9.4□□□□□ -0.9
SEMA3A-203ENST00000424555 TRPM2O94759 1503 aa9.4□□□□□ -0.91
SEMA3A-203ENST00000424555 RHOQP17081 205 aa9.39□□□□□ -0.91
SEMA3A-203ENST00000424555 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
SEMA3A-203ENST00000424555 GJD4Q96KN9 370 aaPredicted RBP9.39□□□□□ -0.91
SEMA3A-203ENST00000424555 DEPDC5O75140 1603 aa9.38□□□□□ -0.91
SEMA3A-203ENST00000424555 ZFYVE16Q7Z3T8 1539 aa9.38□□□□□ -0.91
SEMA3A-203ENST00000424555 RRP1P56182 461 aaKnown RBP9.38□□□□□ -0.91
SEMA3A-203ENST00000424555 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
SEMA3A-203ENST00000424555 AFAP1Q8N556 730 aa9.38□□□□□ -0.91
SEMA3A-203ENST00000424555 FBXO45P0C2W1 286 aa9.37□□□□□ -0.91
SEMA3A-203ENST00000424555 IRS1P35568 1242 aa9.37□□□□□ -0.91
SEMA3A-203ENST00000424555 RCAN3Q9UKA8 241 aa9.37□□□□□ -0.91
SEMA3A-203ENST00000424555 MADDQ8WXG6 1647 aa9.37□□□□□ -0.91
SEMA3A-203ENST00000424555 SCAF11Q99590 1463 aaKnown RBP9.36□□□□□ -0.91
SEMA3A-203ENST00000424555 SRSF11Q05519 484 aaKnown RBP9.36□□□□□ -0.91
SEMA3A-203ENST00000424555 IQGAP1P46940 1657 aa9.36□□□□□ -0.91
SEMA3A-203ENST00000424555 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
SEMA3A-203ENST00000424555 RNF225M0QZC1 329 aaPredicted RBP9.35□□□□□ -0.91
SEMA3A-203ENST00000424555 CELA2BP08218 269 aaPredicted RBP9.35□□□□□ -0.91
SEMA3A-203ENST00000424555 DBN1Q16643 649 aa9.35□□□□□ -0.91
SEMA3A-203ENST00000424555 CDCA8Q53HL2 280 aa9.35□□□□□ -0.91
SEMA3A-203ENST00000424555 ZNF837Q96EG3 531 aaPredicted RBP9.35□□□□□ -0.91
SEMA3A-203ENST00000424555 CCDC136Q96JN2 1154 aa9.35□□□□□ -0.91
SEMA3A-203ENST00000424555 GOPCQ9HD26 462 aa9.35□□□□□ -0.91
SEMA3A-203ENST00000424555 ABCA9Q8IUA7 1624 aa9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 ZNF521Q96K83 1311 aa9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 INO80Q9ULG1 1556 aaPredicted RBP9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 A0A1W2PRU2 124 aa9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 ATP5J2-PTCD1G3V325 749 aa9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 PPP2R1AP30153 589 aa9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 TMEM259Q4ZIN3 620 aa9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 PCDHB9Q9Y5E1 797 aa9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 LMTK2Q8IWU2 1503 aa9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 NRXN1Q9ULB1 1477 aa9.34□□□□□ -0.91
SEMA3A-203ENST00000424555 KIAA1210Q9ULL0 1709 aa9.34□□□□□ -0.92
SEMA3A-203ENST00000424555 TET3O43151 1660 aa9.33□□□□□ -0.92
SEMA3A-203ENST00000424555 PIK3C2GO75747 1445 aa9.33□□□□□ -0.92
SEMA3A-203ENST00000424555 ERVK-9P63128 1117 aa9.33□□□□□ -0.92
SEMA3A-203ENST00000424555 CNGB1Q14028 1251 aaPredicted RBP9.33□□□□□ -0.92
SEMA3A-203ENST00000424555 ERICH6Q7L0X2 663 aa9.33□□□□□ -0.92
SEMA3A-203ENST00000424555 TRMT2AQ8IZ69 625 aaKnown RBP9.33□□□□□ -0.92
SEMA3A-203ENST00000424555 EXOC6Q8TAG9 804 aa9.33□□□□□ -0.92
SEMA3A-203ENST00000424555 CLTCL1P53675 1640 aa9.33□□□□□ -0.92
SEMA3A-203ENST00000424555 MYOM2P54296 1465 aa9.33□□□□□ -0.92
SEMA3A-203ENST00000424555 MROH1Q8NDA8 1641 aa9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 SPHKAPQ2M3C7 1700 aa9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 GPR25O00155 361 aa9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 MEN1O00255 615 aa9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 GPR37L1O60883 481 aa9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 SCTRP47872 440 aa9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 MARSP56192 900 aaKnown RBP9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 POU4F2Q12837 409 aa9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 CC2D1BQ5T0F9 858 aaKnown RBP9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 TRIM22Q8IYM9 498 aa9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 PCMTD1Q96MG8 357 aaPredicted RBP9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 KANK1Q14678 1352 aa9.32□□□□□ -0.92
SEMA3A-203ENST00000424555 ATP7AQ04656 1500 aa9.31□□□□□ -0.92
SEMA3A-203ENST00000424555 TCERG1O14776 1098 aaKnown RBP9.31□□□□□ -0.92
SEMA3A-203ENST00000424555 GPC1P35052 558 aa9.31□□□□□ -0.92
SEMA3A-203ENST00000424555 SBNO2Q9Y2G9 1366 aa9.31□□□□□ -0.92
SEMA3A-203ENST00000424555 FANCAO15360 1455 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms