RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 SCN7AQ01118 1682 aa32.66■■■□□ 2.82
TSPAN3-203ENST00000424443 VAMP4O75379 141 aa32.66■■■□□ 2.82
TSPAN3-203ENST00000424443 COPS6Q7L5N1 327 aa32.66■■■□□ 2.82
TSPAN3-203ENST00000424443 XAGE3Q8WTP9 111 aa32.66■■■□□ 2.82
TSPAN3-203ENST00000424443 CLEC4GQ6UXB4 293 aa32.65■■■□□ 2.82
TSPAN3-203ENST00000424443 LRP10Q7Z4F1 713 aa32.65■■■□□ 2.82
TSPAN3-203ENST00000424443 MAP3K15Q6ZN16 1313 aa32.65■■■□□ 2.82
TSPAN3-203ENST00000424443 BCORQ6W2J9 1755 aa32.63■■■□□ 2.81
TSPAN3-203ENST00000424443 ERVV-1B6SEH8 477 aa32.63■■■□□ 2.81
TSPAN3-203ENST00000424443 BICDL1Q6ZP65 573 aa32.63■■■□□ 2.81
TSPAN3-203ENST00000424443 ZBTB3Q9H5J0 574 aa32.63■■■□□ 2.81
TSPAN3-203ENST00000424443 TCERG1O14776 1098 aaKnown RBP32.62■■■□□ 2.81
TSPAN3-203ENST00000424443 TRMT2AQ8IZ69 625 aaKnown RBP32.62■■■□□ 2.81
TSPAN3-203ENST00000424443 RGL2O15211 777 aa32.61■■■□□ 2.81
TSPAN3-203ENST00000424443 KLHL34Q8N239 644 aa32.61■■■□□ 2.81
TSPAN3-203ENST00000424443 SRCAPQ6ZRS2 3230 aa32.61■■■□□ 2.81
TSPAN3-203ENST00000424443 NFIXQ14938 502 aa32.61■■■□□ 2.81
TSPAN3-203ENST00000424443 TBC1D9BQ66K14 1250 aa32.61■■■□□ 2.81
TSPAN3-203ENST00000424443 TM4SF1P30408 202 aa32.6■■■□□ 2.81
TSPAN3-203ENST00000424443 SETDB2Q96T68 719 aa32.6■■■□□ 2.81
TSPAN3-203ENST00000424443 SLC4A2P04920 1241 aa32.59■■■□□ 2.81
TSPAN3-203ENST00000424443 HLFQ16534 295 aa32.59■■■□□ 2.81
TSPAN3-203ENST00000424443 PHAXQ9H814 394 aaKnown RBP32.58■■■□□ 2.81
TSPAN3-203ENST00000424443 ANKRD13DQ6ZTN6 518 aa32.56■■■□□ 2.8
TSPAN3-203ENST00000424443 POLRMTO00411 1230 aaKnown RBP32.56■■■□□ 2.8
TSPAN3-203ENST00000424443 DDR1Q08345 913 aa32.56■■■□□ 2.8
TSPAN3-203ENST00000424443 GIGYF2Q6Y7W6 1299 aaKnown RBP32.56■■■□□ 2.8
TSPAN3-203ENST00000424443 NIP7Q9Y221 180 aaKnown RBP eCLIP32.56■■■□□ 2.8
TSPAN3-203ENST00000424443 DDX58O95786 925 aaKnown RBP32.55■■■□□ 2.8
TSPAN3-203ENST00000424443 CARMIL3Q8ND23 1372 aa32.55■■■□□ 2.8
TSPAN3-203ENST00000424443 NPHP1O15259 732 aa32.54■■■□□ 2.8
TSPAN3-203ENST00000424443 PLBD2Q8NHP8 589 aa32.54■■■□□ 2.8
TSPAN3-203ENST00000424443 FHDC1Q9C0D6 1143 aaPredicted RBP32.54■■■□□ 2.8
TSPAN3-203ENST00000424443 SERPINB2P05120 415 aa32.53■■■□□ 2.8
TSPAN3-203ENST00000424443 RIC3Q7Z5B4 369 aa32.53■■■□□ 2.8
TSPAN3-203ENST00000424443 NUP98P52948 1817 aa32.53■■■□□ 2.8
TSPAN3-203ENST00000424443 CT47B1P0C2W7 299 aaPredicted RBP32.52■■■□□ 2.8
TSPAN3-203ENST00000424443 HSP90AB3PQ58FF7 597 aa32.52■■■□□ 2.8
TSPAN3-203ENST00000424443 ZNF428Q96B54 188 aa32.52■■■□□ 2.8
TSPAN3-203ENST00000424443 CACNA1FO60840 1977 aa32.5■■■□□ 2.79
TSPAN3-203ENST00000424443 GPTP24298 496 aa32.49■■■□□ 2.79
TSPAN3-203ENST00000424443 CD2APQ9Y5K6 639 aa32.49■■■□□ 2.79
TSPAN3-203ENST00000424443 ATP10DQ9P241 1426 aa32.49■■■□□ 2.79
TSPAN3-203ENST00000424443 FLIIQ13045 1269 aa32.48■■■□□ 2.79
TSPAN3-203ENST00000424443 NBPF5PQ86XG9 351 aaPredicted RBP32.48■■■□□ 2.79
TSPAN3-203ENST00000424443 G2E3Q7L622 706 aa32.47■■■□□ 2.79
TSPAN3-203ENST00000424443 YTHDC1Q96MU7 727 aaKnown RBP32.47■■■□□ 2.79
TSPAN3-203ENST00000424443 SYT17Q9BSW7 474 aa32.47■■■□□ 2.79
TSPAN3-203ENST00000424443 FAM177BA6PVY3 158 aa32.46■■■□□ 2.79
TSPAN3-203ENST00000424443 FKBP5Q13451 457 aaPredicted RBP32.46■■■□□ 2.79
TSPAN3-203ENST00000424443 TCIRG1Q13488 830 aa32.46■■■□□ 2.79
TSPAN3-203ENST00000424443 ZNF34Q8IZ26 560 aa32.46■■■□□ 2.79
TSPAN3-203ENST00000424443 CNBD1Q8NA66 436 aa32.46■■■□□ 2.79
TSPAN3-203ENST00000424443 TPTE2Q6XPS3 522 aa32.45■■■□□ 2.78
TSPAN3-203ENST00000424443 AFDNP55196 1824 aaKnown RBP32.45■■■□□ 2.78
TSPAN3-203ENST00000424443 GTF2E1P29083 439 aaPredicted RBP32.44■■■□□ 2.78
TSPAN3-203ENST00000424443 ALDH1L2Q3SY69 923 aa32.44■■■□□ 2.78
TSPAN3-203ENST00000424443 PARP10Q53GL7 1025 aa32.44■■■□□ 2.78
TSPAN3-203ENST00000424443 KSR2Q6VAB6 950 aa32.44■■■□□ 2.78
TSPAN3-203ENST00000424443 NYXQ9GZU5 481 aa32.44■■■□□ 2.78
TSPAN3-203ENST00000424443 PI4KAP2A4QPH2 592 aa32.43■■■□□ 2.78
TSPAN3-203ENST00000424443 ST5P78524 1137 aa32.43■■■□□ 2.78
TSPAN3-203ENST00000424443 PI4KAP1Q8N8J0 262 aa32.43■■■□□ 2.78
TSPAN3-203ENST00000424443 PPP1R42Q7Z4L9 355 aa32.42■■■□□ 2.78
TSPAN3-203ENST00000424443 SSH1Q8WYL5 1049 aa32.42■■■□□ 2.78
TSPAN3-203ENST00000424443 MAP3K2Q9Y2U5 619 aa32.42■■■□□ 2.78
TSPAN3-203ENST00000424443 C10orf71Q711Q0 1435 aa32.42■■■□□ 2.78
TSPAN3-203ENST00000424443 ARFGEF2Q9Y6D5 1785 aa32.42■■■□□ 2.78
TSPAN3-203ENST00000424443 PRR5LQ6MZQ0 368 aa32.41■■■□□ 2.78
TSPAN3-203ENST00000424443 SMC4Q9NTJ3 1288 aa32.41■■■□□ 2.78
TSPAN3-203ENST00000424443 NRXN2Q9P2S2 1712 aa32.41■■■□□ 2.78
TSPAN3-203ENST00000424443 ANKRD36CQ5JPF3 1778 aa32.41■■■□□ 2.78
TSPAN3-203ENST00000424443 UBN2Q6ZU65 1347 aa32.41■■■□□ 2.78
TSPAN3-203ENST00000424443 BCL2L13Q9BXK5 485 aa32.41■■■□□ 2.78
TSPAN3-203ENST00000424443 NEXNQ0ZGT2 675 aa32.4■■■□□ 2.78
TSPAN3-203ENST00000424443 MRPL50Q8N5N7 158 aaKnown RBP32.4■■■□□ 2.78
TSPAN3-203ENST00000424443 MYD88Q99836 296 aa32.4■■■□□ 2.78
TSPAN3-203ENST00000424443 METTL22Q9BUU2 404 aaPredicted RBP32.39■■■□□ 2.78
TSPAN3-203ENST00000424443 ATP5J2-PTCD1G3V325 749 aa32.38■■■□□ 2.77
TSPAN3-203ENST00000424443 TGFB2P61812 414 aa32.38■■■□□ 2.77
TSPAN3-203ENST00000424443 SUSD4Q5VX71 490 aa32.38■■■□□ 2.77
TSPAN3-203ENST00000424443 NLGN2Q8NFZ4 835 aa32.38■■■□□ 2.77
TSPAN3-203ENST00000424443 NLRP10Q86W26 655 aa32.37■■■□□ 2.77
TSPAN3-203ENST00000424443 CCDC24Q8N4L8 307 aa32.37■■■□□ 2.77
TSPAN3-203ENST00000424443 ADCY9O60503 1353 aa32.37■■■□□ 2.77
TSPAN3-203ENST00000424443 ISCA1Q9BUE6 129 aa32.36■■■□□ 2.77
TSPAN3-203ENST00000424443 UTP14AQ9BVJ6 771 aaKnown RBP32.36■■■□□ 2.77
TSPAN3-203ENST00000424443 KIF13BQ9NQT8 1826 aa32.36■■■□□ 2.77
TSPAN3-203ENST00000424443 IBTKQ9P2D0 1353 aaPredicted RBP32.35■■■□□ 2.77
TSPAN3-203ENST00000424443 RARSP54136 660 aaKnown RBP32.35■■■□□ 2.77
TSPAN3-203ENST00000424443 DNAAF4Q8WXU2 420 aa32.35■■■□□ 2.77
TSPAN3-203ENST00000424443 BRIP1Q9BX63 1249 aa32.35■■■□□ 2.77
TSPAN3-203ENST00000424443 NUTM1Q86Y26 1132 aa32.34■■■□□ 2.77
TSPAN3-203ENST00000424443 TRMT112Q9UI30 125 aaKnown RBP32.34■■■□□ 2.77
TSPAN3-203ENST00000424443 PDE6BP35913 854 aa32.33■■■□□ 2.77
TSPAN3-203ENST00000424443 TRIM28Q13263 835 aaKnown RBP32.33■■■□□ 2.77
TSPAN3-203ENST00000424443 PTPRCP08575 1304 aa32.33■■■□□ 2.77
TSPAN3-203ENST00000424443 NTSR2O95665 410 aa32.32■■■□□ 2.76
TSPAN3-203ENST00000424443 RNF123Q5XPI4 1314 aa32.32■■■□□ 2.76
TSPAN3-203ENST00000424443 ERFEQ4G0M1 354 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms