RNA–Protein interactions for RNA: ENST00000424369.5

TRIM6-204, Transcript of tripartite motif containing 6, humanhuman

TSL 3

Gene TRIM6, Length 468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-204ENST00000424369 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
TRIM6-204ENST00000424369 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
TRIM6-204ENST00000424369 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
TRIM6-204ENST00000424369 CCER2I3L3R5 266 aa13.65□□□□□ -0.22
TRIM6-204ENST00000424369 HDGFL1Q5TGJ6 251 aa13.65□□□□□ -0.22
TRIM6-204ENST00000424369 COPS6Q7L5N1 327 aa13.65□□□□□ -0.22
TRIM6-204ENST00000424369 XAGE3Q8WTP9 111 aa13.65□□□□□ -0.22
TRIM6-204ENST00000424369 C10orf71Q711Q0 1435 aa13.64□□□□□ -0.23
TRIM6-204ENST00000424369 CARMIL3Q8ND23 1372 aa13.64□□□□□ -0.23
TRIM6-204ENST00000424369 GPTP24298 496 aa13.64□□□□□ -0.23
TRIM6-204ENST00000424369 DDX21Q9NR30 783 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM6-204ENST00000424369 NIP7Q9Y221 180 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM6-204ENST00000424369 UTRNP46939 3433 aa13.64□□□□□ -0.23
TRIM6-204ENST00000424369 MAP3K15Q6ZN16 1313 aa13.64□□□□□ -0.23
TRIM6-204ENST00000424369 GOLGB1Q14789 3259 aaKnown RBP13.63□□□□□ -0.23
TRIM6-204ENST00000424369 LAMB4A4D0S4 1761 aa13.63□□□□□ -0.23
TRIM6-204ENST00000424369 TGFB2P61812 414 aa13.63□□□□□ -0.23
TRIM6-204ENST00000424369 PRR5LQ6MZQ0 368 aa13.63□□□□□ -0.23
TRIM6-204ENST00000424369 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
TRIM6-204ENST00000424369 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
TRIM6-204ENST00000424369 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
TRIM6-204ENST00000424369 N4BP2Q86UW6 1770 aaPredicted RBP13.63□□□□□ -0.23
TRIM6-204ENST00000424369 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
TRIM6-204ENST00000424369 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
TRIM6-204ENST00000424369 PXDNLA1KZ92 1463 aa13.62□□□□□ -0.23
TRIM6-204ENST00000424369 ERVV-1B6SEH8 477 aa13.62□□□□□ -0.23
TRIM6-204ENST00000424369 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
TRIM6-204ENST00000424369 PHAXQ9H814 394 aaKnown RBP13.62□□□□□ -0.23
TRIM6-204ENST00000424369 ZNF652Q9Y2D9 606 aa13.62□□□□□ -0.23
TRIM6-204ENST00000424369 IL16Q14005 1332 aa13.62□□□□□ -0.23
TRIM6-204ENST00000424369 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
TRIM6-204ENST00000424369 HOXB7P09629 217 aa13.61□□□□□ -0.23
TRIM6-204ENST00000424369 NBPF5PQ86XG9 351 aaPredicted RBP13.61□□□□□ -0.23
TRIM6-204ENST00000424369 DBF4Q9UBU7 674 aaPredicted RBP13.61□□□□□ -0.23
TRIM6-204ENST00000424369 BCS1LQ9Y276 419 aa13.61□□□□□ -0.23
TRIM6-204ENST00000424369 SCN7AQ01118 1682 aa13.6□□□□□ -0.23
TRIM6-204ENST00000424369 NPHP1O15259 732 aa13.6□□□□□ -0.23
TRIM6-204ENST00000424369 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
TRIM6-204ENST00000424369 SUSD4Q5VX71 490 aa13.6□□□□□ -0.23
TRIM6-204ENST00000424369 GIGYF2Q6Y7W6 1299 aaKnown RBP13.6□□□□□ -0.23
TRIM6-204ENST00000424369 NUTM1Q86Y26 1132 aa13.6□□□□□ -0.23
TRIM6-204ENST00000424369 C2CD5Q86YS7 1000 aa13.6□□□□□ -0.23
TRIM6-204ENST00000424369 ZNF34Q8IZ26 560 aa13.6□□□□□ -0.23
TRIM6-204ENST00000424369 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
TRIM6-204ENST00000424369 UBN2Q6ZU65 1347 aa13.6□□□□□ -0.23
TRIM6-204ENST00000424369 ZNF521Q96K83 1311 aa13.6□□□□□ -0.23
TRIM6-204ENST00000424369 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
TRIM6-204ENST00000424369 BCORQ6W2J9 1755 aa13.59□□□□□ -0.23
TRIM6-204ENST00000424369 TWISTNBQ3B726 338 aaPredicted RBP13.59□□□□□ -0.23
TRIM6-204ENST00000424369 KIF13BQ9NQT8 1826 aa13.59□□□□□ -0.23
TRIM6-204ENST00000424369 VAMP4O75379 141 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 ERFEQ4G0M1 354 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 TPTE2Q6XPS3 522 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 G2E3Q7L622 706 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 SYNE4Q8N205 404 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 CDCA7LQ96GN5 454 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 BRIP1Q9BX63 1249 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 HYPKQ9NX55 129 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 PIM2Q9P1W9 311 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 NRXN2Q9P2S2 1712 aa13.58□□□□□ -0.24
TRIM6-204ENST00000424369 NUP98P52948 1817 aa13.57□□□□□ -0.24
TRIM6-204ENST00000424369 ATP5J2-PTCD1G3V325 749 aa13.57□□□□□ -0.24
TRIM6-204ENST00000424369 H0YIN7 160 aa13.57□□□□□ -0.24
TRIM6-204ENST00000424369 YY1P25490 414 aa13.57□□□□□ -0.24
TRIM6-204ENST00000424369 GOLGA2Q08379 1002 aa13.57□□□□□ -0.24
TRIM6-204ENST00000424369 CCDC30Q5VVM6 783 aa13.57□□□□□ -0.24
TRIM6-204ENST00000424369 ZNF622Q969S3 477 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRIM6-204ENST00000424369 RGL2O15211 777 aa13.56□□□□□ -0.24
TRIM6-204ENST00000424369 GRIN3BO60391 1043 aa13.56□□□□□ -0.24
TRIM6-204ENST00000424369 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
TRIM6-204ENST00000424369 ST5P78524 1137 aa13.56□□□□□ -0.24
TRIM6-204ENST00000424369 TCIRG1Q13488 830 aa13.56□□□□□ -0.24
TRIM6-204ENST00000424369 DALRD3Q5D0E6 543 aaKnown RBP13.56□□□□□ -0.24
TRIM6-204ENST00000424369 ARHGAP27Q6ZUM4 889 aa13.56□□□□□ -0.24
TRIM6-204ENST00000424369 PLBD2Q8NHP8 589 aa13.56□□□□□ -0.24
TRIM6-204ENST00000424369 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
TRIM6-204ENST00000424369 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
TRIM6-204ENST00000424369 SLC4A2P04920 1241 aa13.55□□□□□ -0.24
TRIM6-204ENST00000424369 PDE6BP35913 854 aa13.55□□□□□ -0.24
TRIM6-204ENST00000424369 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
TRIM6-204ENST00000424369 NLRP10Q86W26 655 aa13.55□□□□□ -0.24
TRIM6-204ENST00000424369 NTSR2O95665 410 aa13.54□□□□□ -0.24
TRIM6-204ENST00000424369 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
TRIM6-204ENST00000424369 MYH16Q9H6N6 1097 aa13.54□□□□□ -0.24
TRIM6-204ENST00000424369 ABCC12Q96J65 1359 aa13.54□□□□□ -0.24
TRIM6-204ENST00000424369 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
TRIM6-204ENST00000424369 SRGNP10124 158 aa13.53□□□□□ -0.24
TRIM6-204ENST00000424369 HCLS1P14317 486 aaPredicted RBP13.53□□□□□ -0.24
TRIM6-204ENST00000424369 SLFN5Q08AF3 891 aa13.53□□□□□ -0.24
TRIM6-204ENST00000424369 RTL5Q5HYW3 569 aaPredicted RBP13.53□□□□□ -0.24
TRIM6-204ENST00000424369 TTLL6Q8N841 843 aa13.53□□□□□ -0.24
TRIM6-204ENST00000424369 JARID2Q92833 1246 aaPredicted RBP13.53□□□□□ -0.24
TRIM6-204ENST00000424369 ISCA1Q9BUE6 129 aa13.53□□□□□ -0.24
TRIM6-204ENST00000424369 UTP14AQ9BVJ6 771 aaKnown RBP13.53□□□□□ -0.24
TRIM6-204ENST00000424369 KLRG2A4D1S0 409 aaPredicted RBP13.52□□□□□ -0.25
TRIM6-204ENST00000424369 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
TRIM6-204ENST00000424369 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
TRIM6-204ENST00000424369 SLC51AQ86UW1 340 aa13.52□□□□□ -0.25
TRIM6-204ENST00000424369 MYD88Q99836 296 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms