RNA–Protein interactions for RNA: ENST00000423431.5

SPCS1-202, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 3 BASIC

Gene SPCS1, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-202ENST00000423431 KCNA3P22001 575 aa12.6□□□□□ -0.39
SPCS1-202ENST00000423431 NLGN1Q8N2Q7 840 aa12.6□□□□□ -0.39
SPCS1-202ENST00000423431 USHBP1Q8N6Y0 703 aa12.6□□□□□ -0.39
SPCS1-202ENST00000423431 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
SPCS1-202ENST00000423431 CNTNAP1P78357 1384 aa12.59□□□□□ -0.39
SPCS1-202ENST00000423431 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
SPCS1-202ENST00000423431 LTN1O94822 1766 aa12.59□□□□□ -0.39
SPCS1-202ENST00000423431 HSPA8P11142 646 aaKnown RBP12.59□□□□□ -0.39
SPCS1-202ENST00000423431 VEGFBP49765 207 aa12.59□□□□□ -0.39
SPCS1-202ENST00000423431 RGS19P49795 217 aa12.59□□□□□ -0.39
SPCS1-202ENST00000423431 TAF1LQ8IZX4 1826 aa12.59□□□□□ -0.39
SPCS1-202ENST00000423431 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
SPCS1-202ENST00000423431 CHRNA5P30532 468 aa12.58□□□□□ -0.4
SPCS1-202ENST00000423431 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
SPCS1-202ENST00000423431 MAP3K9P80192 1104 aa12.58□□□□□ -0.4
SPCS1-202ENST00000423431 TRAPPC3LQ5T215 181 aa12.58□□□□□ -0.4
SPCS1-202ENST00000423431 RAPGEF4Q8WZA2 1011 aa12.58□□□□□ -0.4
SPCS1-202ENST00000423431 ZDHHC16Q969W1 377 aa12.58□□□□□ -0.4
SPCS1-202ENST00000423431 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
SPCS1-202ENST00000423431 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
SPCS1-202ENST00000423431 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
SPCS1-202ENST00000423431 AMPHP49418 695 aa12.57□□□□□ -0.4
SPCS1-202ENST00000423431 SIK1P57059 783 aa12.57□□□□□ -0.4
SPCS1-202ENST00000423431 ZBED2Q9BTP6 218 aa12.57□□□□□ -0.4
SPCS1-202ENST00000423431 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
SPCS1-202ENST00000423431 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
SPCS1-202ENST00000423431 WBP1LQ9NX94 342 aa12.57□□□□□ -0.4
SPCS1-202ENST00000423431 ITPK1Q13572 414 aa12.56□□□□□ -0.4
SPCS1-202ENST00000423431 RTCBQ9Y3I0 505 aaKnown RBP12.56□□□□□ -0.4
SPCS1-202ENST00000423431 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
SPCS1-202ENST00000423431 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
SPCS1-202ENST00000423431 KIF13BQ9NQT8 1826 aa12.55□□□□□ -0.4
SPCS1-202ENST00000423431 LMNB1P20700 586 aa12.55□□□□□ -0.4
SPCS1-202ENST00000423431 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
SPCS1-202ENST00000423431 PIGBQ92521 554 aa12.55□□□□□ -0.4
SPCS1-202ENST00000423431 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
SPCS1-202ENST00000423431 POTECB2RU33 542 aa12.54□□□□□ -0.4
SPCS1-202ENST00000423431 HOXC9P31274 260 aa12.54□□□□□ -0.4
SPCS1-202ENST00000423431 RFC4P35249 363 aa12.54□□□□□ -0.4
SPCS1-202ENST00000423431 PTPN5P54829 565 aa12.54□□□□□ -0.4
SPCS1-202ENST00000423431 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
SPCS1-202ENST00000423431 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
SPCS1-202ENST00000423431 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
SPCS1-202ENST00000423431 GYS1P13807 737 aa12.53□□□□□ -0.4
SPCS1-202ENST00000423431 FBLN1P23142 703 aa12.53□□□□□ -0.4
SPCS1-202ENST00000423431 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
SPCS1-202ENST00000423431 HDGFL2Q7Z4V5 671 aaPredicted RBP12.52□□□□□ -0.41
SPCS1-202ENST00000423431 ARFGEF1Q9Y6D6 1849 aa12.52□□□□□ -0.41
SPCS1-202ENST00000423431 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
SPCS1-202ENST00000423431 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
SPCS1-202ENST00000423431 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
SPCS1-202ENST00000423431 TMEM88BA6NKF7 163 aa12.51□□□□□ -0.41
SPCS1-202ENST00000423431 ASAP1Q9ULH1 1129 aa12.51□□□□□ -0.41
SPCS1-202ENST00000423431 MAP3K19Q56UN5 1328 aa12.51□□□□□ -0.41
SPCS1-202ENST00000423431 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
SPCS1-202ENST00000423431 CYP27B1O15528 508 aa12.5□□□□□ -0.41
SPCS1-202ENST00000423431 MAP2K1Q02750 393 aaPredicted RBP12.5□□□□□ -0.41
SPCS1-202ENST00000423431 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
SPCS1-202ENST00000423431 BRCA1P38398 1863 aaKnown RBP12.5□□□□□ -0.41
SPCS1-202ENST00000423431 GRM1Q13255 1194 aa12.49□□□□□ -0.41
SPCS1-202ENST00000423431 DEFB115Q30KQ5 88 aa12.49□□□□□ -0.41
SPCS1-202ENST00000423431 THSD4Q6ZMP0 1018 aa12.49□□□□□ -0.41
SPCS1-202ENST00000423431 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
SPCS1-202ENST00000423431 BEGAINQ9BUH8 593 aa12.49□□□□□ -0.41
SPCS1-202ENST00000423431 PCDHGA10Q9Y5H3 936 aa12.49□□□□□ -0.41
SPCS1-202ENST00000423431 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
SPCS1-202ENST00000423431 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
SPCS1-202ENST00000423431 TSKSQ9UJT2 592 aa12.48□□□□□ -0.41
SPCS1-202ENST00000423431 SBF1O95248 1867 aa12.48□□□□□ -0.41
SPCS1-202ENST00000423431 KDM6AO15550 1401 aaPredicted RBP12.47□□□□□ -0.41
SPCS1-202ENST00000423431 WDR33Q9C0J8 1336 aaKnown RBP12.47□□□□□ -0.41
SPCS1-202ENST00000423431 GOLGA8CPA6NN73 597 aa12.47□□□□□ -0.41
SPCS1-202ENST00000423431 COG3Q96JB2 828 aa12.47□□□□□ -0.41
SPCS1-202ENST00000423431 SRP68Q9UHB9 627 aaKnown RBP12.47□□□□□ -0.41
SPCS1-202ENST00000423431 MON2Q7Z3U7 1717 aa12.47□□□□□ -0.41
SPCS1-202ENST00000423431 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.41
SPCS1-202ENST00000423431 SMG6Q86US8 1419 aaKnown RBP12.46□□□□□ -0.41
SPCS1-202ENST00000423431 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.41
SPCS1-202ENST00000423431 PASKQ96RG2 1323 aa12.46□□□□□ -0.41
SPCS1-202ENST00000423431 DDNO94850 711 aaPredicted RBP12.46□□□□□ -0.41
SPCS1-202ENST00000423431 DDR1Q08345 913 aa12.46□□□□□ -0.41
SPCS1-202ENST00000423431 RRS1Q15050 365 aaKnown RBP12.46□□□□□ -0.41
SPCS1-202ENST00000423431 ERFEQ4G0M1 354 aa12.46□□□□□ -0.41
SPCS1-202ENST00000423431 EAPPQ56P03 285 aaPredicted RBP12.46□□□□□ -0.41
SPCS1-202ENST00000423431 WNT2BQ93097 391 aa12.46□□□□□ -0.41
SPCS1-202ENST00000423431 MCOLN1Q9GZU1 580 aa12.46□□□□□ -0.41
SPCS1-202ENST00000423431 ABT1Q9ULW3 272 aaKnown RBP12.46□□□□□ -0.41
SPCS1-202ENST00000423431 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
SPCS1-202ENST00000423431 SLC12A5Q9H2X9 1139 aa12.45□□□□□ -0.42
SPCS1-202ENST00000423431 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
SPCS1-202ENST00000423431 PPP1R3GB7ZBB8 358 aa12.44□□□□□ -0.42
SPCS1-202ENST00000423431 NFKBIEO00221 500 aa12.44□□□□□ -0.42
SPCS1-202ENST00000423431 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
SPCS1-202ENST00000423431 TTLL6Q8N841 843 aa12.44□□□□□ -0.42
SPCS1-202ENST00000423431 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
SPCS1-202ENST00000423431 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
SPCS1-202ENST00000423431 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
SPCS1-202ENST00000423431 RASSF10A6NK89 507 aa12.43□□□□□ -0.42
SPCS1-202ENST00000423431 TERF2IPQ9NYB0 399 aa12.43□□□□□ -0.42
SPCS1-202ENST00000423431 ITGB4P16144 1822 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms