RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 NARFQ9UHQ1 456 aa12.77□□□□□ -0.37
ECHDC3-203ENST00000422887 ZNF652Q9Y2D9 606 aa12.77□□□□□ -0.37
ECHDC3-203ENST00000422887 KIF16BQ96L93 1317 aa12.77□□□□□ -0.37
ECHDC3-203ENST00000422887 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 ERVV-1B6SEH8 477 aa12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 ZPR1O75312 459 aa12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 PROSER3Q2NL68 480 aa12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 SMC4Q9NTJ3 1288 aa12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 TNRC6CQ9HCJ0 1690 aaKnown RBP12.76□□□□□ -0.37
ECHDC3-203ENST00000422887 PTPRCP08575 1304 aa12.75□□□□□ -0.37
ECHDC3-203ENST00000422887 RARSP54136 660 aaKnown RBP12.75□□□□□ -0.37
ECHDC3-203ENST00000422887 CLEC4GQ6UXB4 293 aa12.75□□□□□ -0.37
ECHDC3-203ENST00000422887 MAP3K15Q6ZN16 1313 aa12.75□□□□□ -0.37
ECHDC3-203ENST00000422887 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
ECHDC3-203ENST00000422887 ARFGEF1Q9Y6D6 1849 aa12.75□□□□□ -0.37
ECHDC3-203ENST00000422887 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 MSH5O43196 834 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 CAMTA2O94983 1202 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 ANXA1P04083 346 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 FLIIQ13045 1269 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 HSP90AB3PQ58FF7 597 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 PLBD2Q8NHP8 589 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 XAGE3Q8WTP9 111 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 UTRNP46939 3433 aa12.74□□□□□ -0.37
ECHDC3-203ENST00000422887 PXDNLA1KZ92 1463 aa12.73□□□□□ -0.37
ECHDC3-203ENST00000422887 PTGER2P43116 358 aa12.73□□□□□ -0.37
ECHDC3-203ENST00000422887 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
ECHDC3-203ENST00000422887 MRPL50Q8N5N7 158 aaKnown RBP12.73□□□□□ -0.37
ECHDC3-203ENST00000422887 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
ECHDC3-203ENST00000422887 TBC1D2BQ9UPU7 963 aa12.73□□□□□ -0.37
ECHDC3-203ENST00000422887 GYS1P13807 737 aa12.72□□□□□ -0.37
ECHDC3-203ENST00000422887 FKBP5Q13451 457 aaPredicted RBP12.72□□□□□ -0.37
ECHDC3-203ENST00000422887 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
ECHDC3-203ENST00000422887 TTLL7Q6ZT98 887 aa12.72□□□□□ -0.37
ECHDC3-203ENST00000422887 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
ECHDC3-203ENST00000422887 ARXQ96QS3 562 aa12.72□□□□□ -0.37
ECHDC3-203ENST00000422887 PHAXQ9H814 394 aaKnown RBP12.72□□□□□ -0.37
ECHDC3-203ENST00000422887 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
ECHDC3-203ENST00000422887 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.37
ECHDC3-203ENST00000422887 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
ECHDC3-203ENST00000422887 GIGYF2Q6Y7W6 1299 aaKnown RBP12.71□□□□□ -0.37
ECHDC3-203ENST00000422887 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.37
ECHDC3-203ENST00000422887 BCL2L13Q9BXK5 485 aa12.71□□□□□ -0.37
ECHDC3-203ENST00000422887 ZBTB3Q9H5J0 574 aa12.71□□□□□ -0.37
ECHDC3-203ENST00000422887 SRP68Q9UHB9 627 aaKnown RBP12.71□□□□□ -0.37
ECHDC3-203ENST00000422887 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.37
ECHDC3-203ENST00000422887 A0A1B0GUL6 1792 aa12.71□□□□□ -0.38
ECHDC3-203ENST00000422887 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
ECHDC3-203ENST00000422887 IBTKQ9P2D0 1353 aaPredicted RBP12.7□□□□□ -0.38
ECHDC3-203ENST00000422887 TAF1P21675 1872 aa12.7□□□□□ -0.38
ECHDC3-203ENST00000422887 IPO8O15397 1037 aaKnown RBP12.7□□□□□ -0.38
ECHDC3-203ENST00000422887 RIC3Q7Z5B4 369 aa12.7□□□□□ -0.38
ECHDC3-203ENST00000422887 API5Q9BZZ5 524 aaKnown RBP12.7□□□□□ -0.38
ECHDC3-203ENST00000422887 C10orf71Q711Q0 1435 aa12.7□□□□□ -0.38
ECHDC3-203ENST00000422887 ADCY9O60503 1353 aa12.69□□□□□ -0.38
ECHDC3-203ENST00000422887 NEXNQ0ZGT2 675 aa12.69□□□□□ -0.38
ECHDC3-203ENST00000422887 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
ECHDC3-203ENST00000422887 G2E3Q7L622 706 aa12.69□□□□□ -0.38
ECHDC3-203ENST00000422887 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 POLD1P28340 1107 aa12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 TCIRG1Q13488 830 aa12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 FKBP8Q14318 412 aa12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 METTL22Q9BUU2 404 aaPredicted RBP12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 MAP3K2Q9Y2U5 619 aa12.68□□□□□ -0.38
ECHDC3-203ENST00000422887 BCAR3O75815 825 aa12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 ZBTB7AO95365 584 aa12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 HLFQ16534 295 aa12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 ZKSCAN2Q63HK3 967 aa12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 SETDB2Q96T68 719 aa12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 SPON1Q9HCB6 807 aa12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 NIP7Q9Y221 180 aaKnown RBP eCLIP12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 LRRC37AA6NMS7 1700 aa12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
ECHDC3-203ENST00000422887 RIC1Q4ADV7 1423 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 MMP10P09238 476 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 MS4A1P11836 297 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 TM4SF1P30408 202 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 DDR1Q08345 913 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 NFIXQ14938 502 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 TBC1D9BQ66K14 1250 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 ATF7IPQ6VMQ6 1270 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 ZNF34Q8IZ26 560 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 NYXQ9GZU5 481 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 NOB1Q9ULX3 412 aaKnown RBP12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 PARP3Q9Y6F1 533 aa12.66□□□□□ -0.38
ECHDC3-203ENST00000422887 SBF1O95248 1867 aa12.65□□□□□ -0.38
ECHDC3-203ENST00000422887 COL4A1P02462 1669 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms