RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 PPP1R42Q7Z4L9 355 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 LUZP1Q86V48 1076 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 CNTROBQ8N137 903 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 KDRP35968 1356 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 TOPAZ1Q8N9V7 1692 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 VPS53Q5VIR6 699 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 TTC6Q86TZ1 520 aa15.15■□□□□ 0.02
CTCFL-204ENST00000422869 BBXQ8WY36 941 aaPredicted RBP15.15■□□□□ 0.02
CTCFL-204ENST00000422869 CHD2O14647 1828 aaKnown RBP15.14■□□□□ 0.01
CTCFL-204ENST00000422869 CEP170BQ9Y4F5 1589 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-204ENST00000422869 TECPR2O15040 1411 aa15.14■□□□□ 0.01
CTCFL-204ENST00000422869 TYRO3Q06418 890 aa15.14■□□□□ 0.01
CTCFL-204ENST00000422869 LRMPQ12912 555 aa15.14■□□□□ 0.01
CTCFL-204ENST00000422869 FEZ1Q99689 392 aa15.14■□□□□ 0.01
CTCFL-204ENST00000422869 NAP1L2Q9ULW6 460 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-204ENST00000422869 USP31Q70CQ4 1352 aa15.14■□□□□ 0.01
CTCFL-204ENST00000422869 VPS37CA5D8V6 355 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-204ENST00000422869 LIG1P18858 919 aa15.14■□□□□ 0.01
CTCFL-204ENST00000422869 MAP3K11Q16584 847 aa15.14■□□□□ 0.01
CTCFL-204ENST00000422869 PTH1RQ03431 593 aa15.13■□□□□ 0.01
CTCFL-204ENST00000422869 CAMK4Q16566 473 aa15.13■□□□□ 0.01
CTCFL-204ENST00000422869 CCDC186Q7Z3E2 898 aa15.13■□□□□ 0.01
CTCFL-204ENST00000422869 PDRG1Q9NUG6 133 aa15.13■□□□□ 0.01
CTCFL-204ENST00000422869 ME3Q16798 604 aa15.13■□□□□ 0.01
CTCFL-204ENST00000422869 JAKMIP1Q96N16 626 aaKnown RBP15.13■□□□□ 0.01
CTCFL-204ENST00000422869 NUP62CLQ9H1M0 184 aa15.13■□□□□ 0.01
CTCFL-204ENST00000422869 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
CTCFL-204ENST00000422869 NRBP1Q9UHY1 535 aa15.13■□□□□ 0.01
CTCFL-204ENST00000422869 MAP3K5Q99683 1374 aa15.13■□□□□ 0.01
CTCFL-204ENST00000422869 SOX12O15370 315 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 SYCP1Q15431 976 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 C16orf45Q96MC5 204 aaPredicted RBP15.12■□□□□ 0.01
CTCFL-204ENST00000422869 SH2B1Q9NRF2 756 aaPredicted RBP15.12■□□□□ 0.01
CTCFL-204ENST00000422869 ACEP12821 1306 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 IGSF3O75054 1194 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 KIF1BPQ96EK5 621 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 CBX8Q9HC52 389 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 CTNNA3Q9UI47 895 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 CHMP3Q9Y3E7 222 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 ELP1O95163 1332 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 SMTNL1A8MU46 457 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 PLA2G4DQ86XP0 818 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 NECAB1Q8N987 351 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 ZSCAN31Q96LW9 406 aaPredicted RBP15.12■□□□□ 0.01
CTCFL-204ENST00000422869 OGFRQ9NZT2 677 aa15.12■□□□□ 0.01
CTCFL-204ENST00000422869 USP6P35125 1406 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 CDC37L1Q7L3B6 337 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 KCNB2Q92953 911 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 TM6SF1Q9BZW5 370 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 TTC21AQ8NDW8 1320 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
CTCFL-204ENST00000422869 SRGAP3O43295 1099 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 ANO6Q4KMQ2 910 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 ZSCAN25Q6NSZ9 544 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 PRPF40BQ6NWY9 871 aaKnown RBP15.11■□□□□ 0.01
CTCFL-204ENST00000422869 FAM173BQ6P4H8 233 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 SIRT1Q96EB6 747 aa15.11■□□□□ 0.01
CTCFL-204ENST00000422869 KRT85P78386 507 aa15.1■□□□□ 0.01
CTCFL-204ENST00000422869 CKAP2LQ8IYA6 745 aa15.1■□□□□ 0.01
CTCFL-204ENST00000422869 CYP46A1Q9Y6A2 500 aa15.1■□□□□ 0.01
CTCFL-204ENST00000422869 FERMT3Q86UX7 667 aa15.1■□□□□ 0.01
CTCFL-204ENST00000422869 PHAXQ9H814 394 aaKnown RBP15.1■□□□□ 0.01
CTCFL-204ENST00000422869 TPCN1Q9ULQ1 816 aa15.1■□□□□ 0.01
CTCFL-204ENST00000422869 ZNF75DP51815 510 aa15.09■□□□□ 0.01
CTCFL-204ENST00000422869 COL9A3Q14050 684 aaPredicted RBP15.09■□□□□ 0.01
CTCFL-204ENST00000422869 NAA30Q147X3 362 aaPredicted RBP15.09■□□□□ 0.01
CTCFL-204ENST00000422869 RBM43Q6ZSC3 357 aaKnown RBP15.09■□□□□ 0.01
CTCFL-204ENST00000422869 DACT1Q9NYF0 836 aa15.09■□□□□ 0.01
CTCFL-204ENST00000422869 CCDC171Q6TFL3 1326 aa15.09■□□□□ 0.01
CTCFL-204ENST00000422869 IGSF1Q8N6C5 1336 aa15.09■□□□□ 0.01
CTCFL-204ENST00000422869 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.09■□□□□ 0.01
CTCFL-204ENST00000422869 LARP1BQ659C4 914 aaKnown RBP15.09■□□□□ 0.01
CTCFL-204ENST00000422869 DDX54Q8TDD1 881 aaKnown RBP15.09■□□□□ 0.01
CTCFL-204ENST00000422869 EYA1Q99502 592 aa15.09■□□□□ 0.01
CTCFL-204ENST00000422869 TNMDQ9H2S6 317 aa15.09■□□□□ 0.01
CTCFL-204ENST00000422869 NBPF7P0C2Y1 421 aaPredicted RBP15.09■□□□□ 0.01
CTCFL-204ENST00000422869 TNNT1P13805 278 aa15.09■□□□□ 0.01
CTCFL-204ENST00000422869 NECTIN1Q15223 517 aa15.09■□□□□ 0.01
CTCFL-204ENST00000422869 HTATSF1O43719 755 aaKnown RBP15.08■□□□□ 0
CTCFL-204ENST00000422869 FLT4P35916 1363 aa15.08■□□□□ 0
CTCFL-204ENST00000422869 TTC41PQ6P2S7 1318 aa15.08■□□□□ 0
CTCFL-204ENST00000422869 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.08■□□□□ 0
CTCFL-204ENST00000422869 DRC7Q8IY82 874 aa15.08■□□□□ 0
CTCFL-204ENST00000422869 TDRD7Q8NHU6 1098 aaKnown RBP15.08■□□□□ 0
CTCFL-204ENST00000422869 SBNO1A3KN83 1393 aa15.07■□□□□ 0
CTCFL-204ENST00000422869 ROBO2Q9HCK4 1378 aa15.07■□□□□ 0
CTCFL-204ENST00000422869 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
CTCFL-204ENST00000422869 TRIM5Q9C035 493 aa15.07■□□□□ 0
CTCFL-204ENST00000422869 DDX41Q9UJV9 622 aaKnown RBP15.07■□□□□ 0
CTCFL-204ENST00000422869 CACTINQ8WUQ7 758 aaKnown RBP15.07■□□□□ 0
CTCFL-204ENST00000422869 PAXBP1Q9Y5B6 917 aa15.07■□□□□ 0
CTCFL-204ENST00000422869 PLEKHG3A1L390 1219 aa15.06■□□□□ 0
CTCFL-204ENST00000422869 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
CTCFL-204ENST00000422869 CCDC144BQ3MJ40 725 aa15.06■□□□□ 0
CTCFL-204ENST00000422869 CCDC144CPQ8IYA2 1237 aa15.06■□□□□ 0
CTCFL-204ENST00000422869 RUFY2Q8WXA3 655 aa15.06■□□□□ 0
CTCFL-204ENST00000422869 CGNQ9P2M7 1197 aaKnown RBP15.06■□□□□ 0
CTCFL-204ENST00000422869 IL17REQ8NFR9 667 aa15.06■□□□□ 0
CTCFL-204ENST00000422869 CLSTN2Q9H4D0 955 aa15.06■□□□□ 0
CTCFL-204ENST00000422869 ADGRL3Q9HAR2 1447 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms