RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 SERPINB2P05120 415 aa10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 CHRNA5P30532 468 aa10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 RALBP1Q15311 655 aa10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 TAF7Q15545 349 aaPredicted RBP10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 THUMPD2Q9BTF0 503 aaKnown RBP10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 PNNQ9H307 717 aaKnown RBP10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 ZNF330Q9Y3S2 320 aaPredicted RBP10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 SBF1O95248 1867 aa10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 ANKRD31Q8N7Z5 1873 aa10.85□□□□□ -0.67
TRIM43CP-201ENST00000422468 SNRPA1P09661 255 aaKnown RBP10.84□□□□□ -0.67
TRIM43CP-201ENST00000422468 NPM2Q86SE8 214 aaKnown RBP10.84□□□□□ -0.67
TRIM43CP-201ENST00000422468 TBC1D2BQ9UPU7 963 aa10.84□□□□□ -0.67
TRIM43CP-201ENST00000422468 USP16Q9Y5T5 823 aa10.84□□□□□ -0.67
TRIM43CP-201ENST00000422468 CEP350Q5VT06 3117 aa10.84□□□□□ -0.67
TRIM43CP-201ENST00000422468 SENP3-EIF4A1A0A087X0R7 540 aa10.83□□□□□ -0.68
TRIM43CP-201ENST00000422468 PRAMEF22A3QJZ6 481 aa10.83□□□□□ -0.68
TRIM43CP-201ENST00000422468 NFE2L2Q16236 605 aa10.83□□□□□ -0.68
TRIM43CP-201ENST00000422468 TBC1D9BQ66K14 1250 aa10.83□□□□□ -0.68
TRIM43CP-201ENST00000422468 BICDL1Q6ZP65 573 aa10.83□□□□□ -0.68
TRIM43CP-201ENST00000422468 ZNF526Q8TF50 670 aaPredicted RBP10.83□□□□□ -0.68
TRIM43CP-201ENST00000422468 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
TRIM43CP-201ENST00000422468 CARMIL3Q8ND23 1372 aa10.82□□□□□ -0.68
TRIM43CP-201ENST00000422468 CAMTA2O94983 1202 aa10.82□□□□□ -0.68
TRIM43CP-201ENST00000422468 DZIP3Q86Y13 1208 aaKnown RBP10.82□□□□□ -0.68
TRIM43CP-201ENST00000422468 CCDC146Q8IYE0 955 aa10.82□□□□□ -0.68
TRIM43CP-201ENST00000422468 PNISRQ8TF01 805 aaKnown RBP10.82□□□□□ -0.68
TRIM43CP-201ENST00000422468 MIS18AQ9NYP9 233 aa10.82□□□□□ -0.68
TRIM43CP-201ENST00000422468 MAPK8IP3Q9UPT6 1336 aa10.82□□□□□ -0.68
TRIM43CP-201ENST00000422468 COL11A2P13942 1736 aaPredicted RBP10.81□□□□□ -0.68
TRIM43CP-201ENST00000422468 CCDC88AQ3V6T2 1871 aa10.81□□□□□ -0.68
TRIM43CP-201ENST00000422468 H0YIN7 160 aa10.81□□□□□ -0.68
TRIM43CP-201ENST00000422468 PIP4K2AP48426 406 aaPredicted RBP10.81□□□□□ -0.68
TRIM43CP-201ENST00000422468 C2CD5Q86YS7 1000 aa10.81□□□□□ -0.68
TRIM43CP-201ENST00000422468 SETDB2Q96T68 719 aa10.81□□□□□ -0.68
TRIM43CP-201ENST00000422468 ADAMTS8Q9UP79 889 aa10.81□□□□□ -0.68
TRIM43CP-201ENST00000422468 GTF3C3Q9Y5Q9 886 aa10.81□□□□□ -0.68
TRIM43CP-201ENST00000422468 NBPF26B4DH59 902 aa10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 PDE6BP35913 854 aa10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 C9orf131Q5VYM1 1079 aa10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 PRR5LQ6MZQ0 368 aa10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 NBPF10Q6P3W6 841 aaKnown RBP10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 CLEC4GQ6UXB4 293 aa10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 NBPF15Q8N660 670 aa10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 BRIP1Q9BX63 1249 aa10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 CACNA1SQ13698 1873 aa10.8□□□□□ -0.68
TRIM43CP-201ENST00000422468 RGL2O15211 777 aa10.79□□□□□ -0.68
TRIM43CP-201ENST00000422468 TTLL6Q8N841 843 aa10.79□□□□□ -0.68
TRIM43CP-201ENST00000422468 CNBD1Q8NA66 436 aa10.79□□□□□ -0.68
TRIM43CP-201ENST00000422468 TRIM35Q9UPQ4 493 aa10.79□□□□□ -0.68
TRIM43CP-201ENST00000422468 ZNF652Q9Y2D9 606 aa10.79□□□□□ -0.68
TRIM43CP-201ENST00000422468 RRP7AQ9Y3A4 280 aaKnown RBP10.79□□□□□ -0.68
TRIM43CP-201ENST00000422468 ARFGEF2Q9Y6D5 1785 aa10.79□□□□□ -0.68
TRIM43CP-201ENST00000422468 NUP98P52948 1817 aa10.79□□□□□ -0.68
TRIM43CP-201ENST00000422468 KIF3CO14782 793 aa10.78□□□□□ -0.68
TRIM43CP-201ENST00000422468 EIF4A1P60842 406 aaKnown RBP10.78□□□□□ -0.68
TRIM43CP-201ENST00000422468 RNF181Q9P0P0 153 aa10.78□□□□□ -0.68
TRIM43CP-201ENST00000422468 FER1L6Q2WGJ9 1857 aa10.78□□□□□ -0.68
TRIM43CP-201ENST00000422468 NPHP1O15259 732 aa10.77□□□□□ -0.69
TRIM43CP-201ENST00000422468 RIPK4P57078 832 aa10.77□□□□□ -0.69
TRIM43CP-201ENST00000422468 ST5P78524 1137 aa10.77□□□□□ -0.69
TRIM43CP-201ENST00000422468 NBPF5PQ86XG9 351 aaPredicted RBP10.77□□□□□ -0.69
TRIM43CP-201ENST00000422468 CCDC24Q8N4L8 307 aa10.77□□□□□ -0.69
TRIM43CP-201ENST00000422468 ZNF622Q969S3 477 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRIM43CP-201ENST00000422468 DICER1Q9UPY3 1922 aaKnown RBP10.77□□□□□ -0.69
TRIM43CP-201ENST00000422468 TIAM2Q8IVF5 1701 aa10.77□□□□□ -0.69
TRIM43CP-201ENST00000422468 SLX4Q8IY92 1834 aa10.77□□□□□ -0.69
TRIM43CP-201ENST00000422468 TNRC6CQ9HCJ0 1690 aaKnown RBP10.76□□□□□ -0.69
TRIM43CP-201ENST00000422468 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
TRIM43CP-201ENST00000422468 TMPOP42166 694 aaKnown RBP10.76□□□□□ -0.69
TRIM43CP-201ENST00000422468 RASSF7Q02833 373 aa10.76□□□□□ -0.69
TRIM43CP-201ENST00000422468 LMOD3Q0VAK6 560 aa10.76□□□□□ -0.69
TRIM43CP-201ENST00000422468 KRT24Q2M2I5 525 aa10.76□□□□□ -0.69
TRIM43CP-201ENST00000422468 SRGNP10124 158 aa10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 LMNB1P20700 586 aa10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 STYK1Q6J9G0 422 aa10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 TPTE2Q6XPS3 522 aa10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 NMRK2Q9NPI5 230 aa10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 BABAM1Q9NWV8 329 aa10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 TSPYL4Q9UJ04 414 aa10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 NIP7Q9Y221 180 aaKnown RBP eCLIP10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 KDM2BQ8NHM5 1336 aa10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 ZC3H4Q9UPT8 1303 aaKnown RBP10.75□□□□□ -0.69
TRIM43CP-201ENST00000422468 ERVV-1B6SEH8 477 aa10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 NFKBIEO00221 500 aa10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 TOMM70O94826 608 aa10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 HSPA6P17066 643 aa10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 WDR43Q15061 677 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 HLFQ16534 295 aa10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 NGEFQ8N5V2 710 aa10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 CNKSR1Q969H4 720 aa10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 MASTLQ96GX5 879 aa10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 ERBB4Q15303 1308 aa10.74□□□□□ -0.69
TRIM43CP-201ENST00000422468 KLRG2A4D1S0 409 aaPredicted RBP10.73□□□□□ -0.69
TRIM43CP-201ENST00000422468 C21orf2O43822 256 aa10.73□□□□□ -0.69
TRIM43CP-201ENST00000422468 MYL6BP14649 208 aa10.73□□□□□ -0.69
TRIM43CP-201ENST00000422468 PRELPP51888 382 aa10.73□□□□□ -0.69
TRIM43CP-201ENST00000422468 KIF6Q6ZMV9 814 aa10.73□□□□□ -0.69
TRIM43CP-201ENST00000422468 RUNDC1Q96C34 613 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms