RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 ADGRL3Q9HAR2 1447 aa8.57□□□□□ -1.04
CCR9-204ENST00000422395 METP08581 1390 aa8.57□□□□□ -1.04
CCR9-204ENST00000422395 PPEF1O14829 653 aaPredicted RBP8.56□□□□□ -1.04
CCR9-204ENST00000422395 HSP90AB1P08238 724 aaKnown RBP8.56□□□□□ -1.04
CCR9-204ENST00000422395 CFHP08603 1231 aa8.56□□□□□ -1.04
CCR9-204ENST00000422395 NUCB2P80303 420 aa8.56□□□□□ -1.04
CCR9-204ENST00000422395 SMYD5Q6GMV2 418 aa8.56□□□□□ -1.04
CCR9-204ENST00000422395 SASS6Q6UVJ0 657 aa8.56□□□□□ -1.04
CCR9-204ENST00000422395 BRINP3Q76B58 766 aa8.56□□□□□ -1.04
CCR9-204ENST00000422395 ZC3H15Q8WU90 426 aaKnown RBP8.56□□□□□ -1.04
CCR9-204ENST00000422395 GTPBP4Q9BZE4 634 aaKnown RBP8.56□□□□□ -1.04
CCR9-204ENST00000422395 CCDC39Q9UFE4 941 aa8.56□□□□□ -1.04
CCR9-204ENST00000422395 PRDM4Q9UKN5 801 aa8.56□□□□□ -1.04
CCR9-204ENST00000422395 ERBB4Q15303 1308 aa8.56□□□□□ -1.04
CCR9-204ENST00000422395 SENP3-EIF4A1A0A087X0R7 540 aa8.55□□□□□ -1.04
CCR9-204ENST00000422395 ACTN4O43707 911 aaKnown RBP8.55□□□□□ -1.04
CCR9-204ENST00000422395 BCAR3O75815 825 aa8.55□□□□□ -1.04
CCR9-204ENST00000422395 HMGN5P82970 282 aaKnown RBP8.55□□□□□ -1.04
CCR9-204ENST00000422395 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
CCR9-204ENST00000422395 ZNF772Q68DY9 489 aaPredicted RBP8.55□□□□□ -1.04
CCR9-204ENST00000422395 TRIM67Q6ZTA4 783 aa8.55□□□□□ -1.04
CCR9-204ENST00000422395 TNPO1Q92973 898 aaKnown RBP8.55□□□□□ -1.04
CCR9-204ENST00000422395 APAF1O14727 1248 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 KIF20AO95235 890 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 ADH1BP00325 375 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 RARSP54136 660 aaKnown RBP8.54□□□□□ -1.04
CCR9-204ENST00000422395 MVPQ14764 893 aaKnown RBP8.54□□□□□ -1.04
CCR9-204ENST00000422395 TMEM134Q9H6X4 195 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 DDX19BQ9UMR2 479 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 COG6Q9Y2V7 657 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 KIAA1210Q9ULL0 1709 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 PTCH1Q13635 1447 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 NUTM2FA1L443 756 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
CCR9-204ENST00000422395 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
CCR9-204ENST00000422395 ZKSCAN2Q63HK3 967 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
CCR9-204ENST00000422395 WWC1Q8IX03 1113 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 RUNDC1Q96C34 613 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 PDLIM2Q96JY6 352 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 PRIMPOLQ96LW4 560 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 CCDC94Q9BW85 323 aaPredicted RBP8.54□□□□□ -1.04
CCR9-204ENST00000422395 SLC6A16Q9GZN6 736 aa8.54□□□□□ -1.04
CCR9-204ENST00000422395 CWC22Q9HCG8 908 aaKnown RBP8.54□□□□□ -1.04
CCR9-204ENST00000422395 LETM1O95202 739 aaPredicted RBP8.53□□□□□ -1.04
CCR9-204ENST00000422395 MFAP1P55081 439 aaKnown RBP8.53□□□□□ -1.04
CCR9-204ENST00000422395 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
CCR9-204ENST00000422395 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
CCR9-204ENST00000422395 IFT172Q9UG01 1749 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 CDK12Q9NYV4 1490 aaPredicted RBP8.52□□□□□ -1.05
CCR9-204ENST00000422395 UQCRHLA0A096LP55 91 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 RCCD1A6NED2 376 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 K7ELQ4 463 aaPredicted RBP8.52□□□□□ -1.05
CCR9-204ENST00000422395 UQCRHP07919 91 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 RIPK4P57078 832 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 DMTNQ08495 405 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 FOXC1Q12948 553 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 NBPF1Q3BBV0 1214 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 BMP2KLQ5H9B9 411 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 FTSJ3Q8IY81 847 aaKnown RBP8.52□□□□□ -1.05
CCR9-204ENST00000422395 PANK1Q8TE04 598 aa8.52□□□□□ -1.05
CCR9-204ENST00000422395 C1orf167Q5SNV9 1468 aa8.51□□□□□ -1.05
CCR9-204ENST00000422395 IPO8O15397 1037 aaKnown RBP8.51□□□□□ -1.05
CCR9-204ENST00000422395 RXRBP28702 533 aa8.51□□□□□ -1.05
CCR9-204ENST00000422395 RBM10P98175 930 aaKnown RBP8.51□□□□□ -1.05
CCR9-204ENST00000422395 CDC42BPGQ6DT37 1551 aa8.51□□□□□ -1.05
CCR9-204ENST00000422395 DZIP1LQ8IYY4 767 aaKnown RBP8.51□□□□□ -1.05
CCR9-204ENST00000422395 LRRC59Q96AG4 307 aaKnown RBP8.51□□□□□ -1.05
CCR9-204ENST00000422395 ZNF428Q96B54 188 aa8.51□□□□□ -1.05
CCR9-204ENST00000422395 CFAP53Q96M91 514 aa8.51□□□□□ -1.05
CCR9-204ENST00000422395 ARXQ96QS3 562 aa8.51□□□□□ -1.05
CCR9-204ENST00000422395 MARF1Q9Y4F3 1742 aaKnown RBP8.51□□□□□ -1.05
CCR9-204ENST00000422395 PCDHB15Q9Y5E8 787 aa8.51□□□□□ -1.05
CCR9-204ENST00000422395 DDX49Q9Y6V7 483 aaKnown RBP8.51□□□□□ -1.05
CCR9-204ENST00000422395 PNPLA6Q8IY17 1366 aa8.5□□□□□ -1.05
CCR9-204ENST00000422395 ROBO2Q9HCK4 1378 aa8.5□□□□□ -1.05
CCR9-204ENST00000422395 SBNO2Q9Y2G9 1366 aa8.5□□□□□ -1.05
CCR9-204ENST00000422395 AFF2P51816 1311 aa8.5□□□□□ -1.05
CCR9-204ENST00000422395 MBD3O95983 291 aa8.5□□□□□ -1.05
CCR9-204ENST00000422395 PTGDRQ13258 359 aa8.5□□□□□ -1.05
CCR9-204ENST00000422395 DDX17Q92841 729 aaKnown RBP8.5□□□□□ -1.05
CCR9-204ENST00000422395 SYAP1Q96A49 352 aaPredicted RBP8.5□□□□□ -1.05
CCR9-204ENST00000422395 FAM13BQ9NYF5 915 aa8.5□□□□□ -1.05
CCR9-204ENST00000422395 R3HCC1Q9Y3T6 440 aaKnown RBP8.5□□□□□ -1.05
CCR9-204ENST00000422395 ADGRG1Q9Y653 693 aa8.5□□□□□ -1.05
CCR9-204ENST00000422395 COL22A1Q8NFW1 1626 aaPredicted RBP8.49□□□□□ -1.05
CCR9-204ENST00000422395 KNDC1Q76NI1 1749 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 IL16Q14005 1332 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 TPM3P06753 285 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 GTF2F1P35269 517 aaKnown RBP eCLIP8.49□□□□□ -1.05
CCR9-204ENST00000422395 KIAA2012Q0VF49 1180 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 RABEP1Q15276 862 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 GAS2L3Q86XJ1 694 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 FAM184AQ8NB25 1140 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 EMID1Q96A84 441 aaPredicted RBP8.49□□□□□ -1.05
CCR9-204ENST00000422395 GCC1Q96CN9 775 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 C8orf37Q96NL8 207 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 NSD2O96028 1365 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 ABCC11Q96J66 1382 aa8.49□□□□□ -1.05
CCR9-204ENST00000422395 RPGRIP1LQ68CZ1 1315 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms