RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 TMEM63CQ9P1W3 806 aa16.12■□□□□ 0.17
MCF2L-213ENST00000421756 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
MCF2L-213ENST00000421756 LARGE1O95461 756 aa16.12■□□□□ 0.17
MCF2L-213ENST00000421756 EPHA10Q5JZY3 1008 aa16.12■□□□□ 0.17
MCF2L-213ENST00000421756 PI4K2BQ8TCG2 481 aa16.12■□□□□ 0.17
MCF2L-213ENST00000421756 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
MCF2L-213ENST00000421756 EAF2Q96CJ1 260 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-213ENST00000421756 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 ZBTB3Q9H5J0 574 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 KIF24Q5T7B8 1368 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 SNX14Q9Y5W7 946 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 ESPNB1AK53 854 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 GRM8O00222 908 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 CNPY2Q9Y2B0 182 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 ADCY9O60503 1353 aa16.11■□□□□ 0.17
MCF2L-213ENST00000421756 KDM4AO75164 1064 aa16.1■□□□□ 0.17
MCF2L-213ENST00000421756 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-213ENST00000421756 CCDC129Q6ZRS4 1044 aa16.1■□□□□ 0.17
MCF2L-213ENST00000421756 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
MCF2L-213ENST00000421756 ZNF790Q6PG37 636 aa16.1■□□□□ 0.17
MCF2L-213ENST00000421756 PTMAP06454 111 aaKnown RBP16.1■□□□□ 0.17
MCF2L-213ENST00000421756 FGD1P98174 961 aa16.09■□□□□ 0.17
MCF2L-213ENST00000421756 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
MCF2L-213ENST00000421756 SMC3Q9UQE7 1217 aa16.09■□□□□ 0.17
MCF2L-213ENST00000421756 NCOA3Q9Y6Q9 1424 aa16.09■□□□□ 0.17
MCF2L-213ENST00000421756 SGSM2O43147 1006 aa16.08■□□□□ 0.17
MCF2L-213ENST00000421756 DDX58O95786 925 aaKnown RBP16.08■□□□□ 0.17
MCF2L-213ENST00000421756 CABP4P57796 275 aa16.08■□□□□ 0.17
MCF2L-213ENST00000421756 AMOTQ4VCS5 1084 aa16.08■□□□□ 0.17
MCF2L-213ENST00000421756 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.17
MCF2L-213ENST00000421756 CWC22Q9HCG8 908 aaKnown RBP16.08■□□□□ 0.17
MCF2L-213ENST00000421756 NMIQ13287 307 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-213ENST00000421756 TOM1L2Q6ZVM7 507 aa16.08■□□□□ 0.16
MCF2L-213ENST00000421756 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
MCF2L-213ENST00000421756 PXDNQ92626 1479 aa16.08■□□□□ 0.16
MCF2L-213ENST00000421756 A0A087WZG4 1122 aa16.08■□□□□ 0.16
MCF2L-213ENST00000421756 GLRX3O76003 335 aaKnown RBP16.07■□□□□ 0.16
MCF2L-213ENST00000421756 SASH1O94885 1247 aa16.07■□□□□ 0.16
MCF2L-213ENST00000421756 CEBPZQ03701 1054 aaKnown RBP16.07■□□□□ 0.16
MCF2L-213ENST00000421756 SALL3Q9BXA9 1300 aa16.07■□□□□ 0.16
MCF2L-213ENST00000421756 RAB11FIP3O75154 756 aa16.07■□□□□ 0.16
MCF2L-213ENST00000421756 IGKV5-2P06315 115 aa16.07■□□□□ 0.16
MCF2L-213ENST00000421756 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
MCF2L-213ENST00000421756 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-213ENST00000421756 AKAP12Q02952 1782 aa16.07■□□□□ 0.16
MCF2L-213ENST00000421756 FAM177BA6PVY3 158 aa16.07■□□□□ 0.16
MCF2L-213ENST00000421756 NRKQ7Z2Y5 1582 aa16.07■□□□□ 0.16
MCF2L-213ENST00000421756 REREQ9P2R6 1566 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 A1BGP04217 495 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 GPATCH3Q96I76 525 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 ZNF594Q96JF6 807 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-213ENST00000421756 PDRG1Q9NUG6 133 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 HSP90AB3PQ58FF7 597 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 RUFY3Q7L099 469 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 KAZALD1Q96I82 304 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 PRDM11Q9NQV5 511 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
MCF2L-213ENST00000421756 A0A0D9SFI3 127 aa16.05■□□□□ 0.16
MCF2L-213ENST00000421756 POLA2Q14181 598 aa16.05■□□□□ 0.16
MCF2L-213ENST00000421756 ZNF830Q96NB3 372 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-213ENST00000421756 PIK3C2AO00443 1686 aa16.05■□□□□ 0.16
MCF2L-213ENST00000421756 HSP90B1P14625 803 aaKnown RBP16.05■□□□□ 0.16
MCF2L-213ENST00000421756 HSPA4P34932 840 aa16.05■□□□□ 0.16
MCF2L-213ENST00000421756 TFCP2Q12800 502 aa16.05■□□□□ 0.16
MCF2L-213ENST00000421756 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
MCF2L-213ENST00000421756 STAP2Q9UGK3 403 aa16.05■□□□□ 0.16
MCF2L-213ENST00000421756 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
MCF2L-213ENST00000421756 TIMM10P62072 90 aa16.05■□□□□ 0.16
MCF2L-213ENST00000421756 BCL11BQ9C0K0 894 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-213ENST00000421756 LSG1Q9H089 658 aaKnown RBP16.05■□□□□ 0.16
MCF2L-213ENST00000421756 HSP90AB4PQ58FF6 505 aa16.04■□□□□ 0.16
MCF2L-213ENST00000421756 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
MCF2L-213ENST00000421756 LINS1Q8NG48 757 aa16.04■□□□□ 0.16
MCF2L-213ENST00000421756 MSNP26038 577 aaKnown RBP16.04■□□□□ 0.16
MCF2L-213ENST00000421756 GJB2P29033 226 aa16.04■□□□□ 0.16
MCF2L-213ENST00000421756 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
MCF2L-213ENST00000421756 DDX21Q9NR30 783 aaKnown RBP eCLIP16.04■□□□□ 0.16
MCF2L-213ENST00000421756 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
MCF2L-213ENST00000421756 ERBB3P21860 1342 aa16.04■□□□□ 0.16
MCF2L-213ENST00000421756 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-213ENST00000421756 LMBR1LQ6UX01 489 aa16.03■□□□□ 0.16
MCF2L-213ENST00000421756 CYP27B1O15528 508 aa16.03■□□□□ 0.16
MCF2L-213ENST00000421756 DNM1Q05193 864 aaKnown RBP16.03■□□□□ 0.16
MCF2L-213ENST00000421756 CAMK4Q16566 473 aa16.03■□□□□ 0.16
MCF2L-213ENST00000421756 ZNF589Q86UQ0 364 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-213ENST00000421756 FBXW7Q969H0 707 aa16.03■□□□□ 0.16
MCF2L-213ENST00000421756 SYT1P21579 422 aa16.03■□□□□ 0.16
MCF2L-213ENST00000421756 TTLL7Q6ZT98 887 aa16.03■□□□□ 0.16
MCF2L-213ENST00000421756 DBNDD2Q9BQY9 259 aa16.03■□□□□ 0.16
MCF2L-213ENST00000421756 C19orf44Q9H6X5 657 aa16.03■□□□□ 0.16
MCF2L-213ENST00000421756 CYP2E1P05181 493 aaPredicted RBP16.02■□□□□ 0.16
MCF2L-213ENST00000421756 SLC52A2Q9HAB3 445 aa16.02■□□□□ 0.16
MCF2L-213ENST00000421756 CYP46A1Q9Y6A2 500 aa16.02■□□□□ 0.16
MCF2L-213ENST00000421756 RUFY2Q8WXA3 655 aa16.02■□□□□ 0.15
MCF2L-213ENST00000421756 RAD50Q92878 1312 aa16.02■□□□□ 0.15
MCF2L-213ENST00000421756 LARP1Q6PKG0 1096 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms