RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TBC1D9BQ66K14 1250 aa20.3■□□□□ 0.84
BRAT1-202ENST00000421712 COPS6Q7L5N1 327 aa20.3■□□□□ 0.84
BRAT1-202ENST00000421712 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
BRAT1-202ENST00000421712 ZBTB3Q9H5J0 574 aa20.3■□□□□ 0.84
BRAT1-202ENST00000421712 COL24A1Q17RW2 1714 aa20.3■□□□□ 0.84
BRAT1-202ENST00000421712 TCERG1O14776 1098 aaKnown RBP20.29■□□□□ 0.84
BRAT1-202ENST00000421712 CLEC4GQ6UXB4 293 aa20.29■□□□□ 0.84
BRAT1-202ENST00000421712 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
BRAT1-202ENST00000421712 SYT17Q9BSW7 474 aa20.29■□□□□ 0.84
BRAT1-202ENST00000421712 STK31Q9BXU1 1019 aa20.29■□□□□ 0.84
BRAT1-202ENST00000421712 HYPKQ9NX55 129 aa20.29■□□□□ 0.84
BRAT1-202ENST00000421712 MAP3K15Q6ZN16 1313 aa20.28■□□□□ 0.84
BRAT1-202ENST00000421712 NPHP1O15259 732 aa20.28■□□□□ 0.84
BRAT1-202ENST00000421712 DDR1Q08345 913 aa20.28■□□□□ 0.84
BRAT1-202ENST00000421712 HLFQ16534 295 aa20.28■□□□□ 0.84
BRAT1-202ENST00000421712 CDCA7LQ96GN5 454 aa20.28■□□□□ 0.84
BRAT1-202ENST00000421712 ERVV-1B6SEH8 477 aa20.27■□□□□ 0.84
BRAT1-202ENST00000421712 POLRMTO00411 1230 aaKnown RBP20.27■□□□□ 0.84
BRAT1-202ENST00000421712 SLFN5Q08AF3 891 aa20.27■□□□□ 0.84
BRAT1-202ENST00000421712 SERPINB2P05120 415 aa20.26■□□□□ 0.83
BRAT1-202ENST00000421712 LRP10Q7Z4F1 713 aa20.26■□□□□ 0.83
BRAT1-202ENST00000421712 NIP7Q9Y221 180 aaKnown RBP eCLIP20.26■□□□□ 0.83
BRAT1-202ENST00000421712 VAMP4O75379 141 aa20.25■□□□□ 0.83
BRAT1-202ENST00000421712 CD2APQ9Y5K6 639 aa20.25■□□□□ 0.83
BRAT1-202ENST00000421712 FAM177BA6PVY3 158 aa20.24■□□□□ 0.83
BRAT1-202ENST00000421712 SCN7AQ01118 1682 aa20.23■□□□□ 0.83
BRAT1-202ENST00000421712 RGL2O15211 777 aa20.23■□□□□ 0.83
BRAT1-202ENST00000421712 SLC4A2P04920 1241 aa20.23■□□□□ 0.83
BRAT1-202ENST00000421712 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
BRAT1-202ENST00000421712 PHAXQ9H814 394 aaKnown RBP20.23■□□□□ 0.83
BRAT1-202ENST00000421712 CARMIL3Q8ND23 1372 aa20.22■□□□□ 0.83
BRAT1-202ENST00000421712 BCORQ6W2J9 1755 aa20.22■□□□□ 0.83
BRAT1-202ENST00000421712 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
BRAT1-202ENST00000421712 GPTP24298 496 aa20.22■□□□□ 0.83
BRAT1-202ENST00000421712 GIGYF2Q6Y7W6 1299 aaKnown RBP20.22■□□□□ 0.83
BRAT1-202ENST00000421712 RIC3Q7Z5B4 369 aa20.22■□□□□ 0.83
BRAT1-202ENST00000421712 NBPF5PQ86XG9 351 aaPredicted RBP20.22■□□□□ 0.83
BRAT1-202ENST00000421712 NLGN2Q8NFZ4 835 aa20.22■□□□□ 0.83
BRAT1-202ENST00000421712 DDX58O95786 925 aaKnown RBP20.21■□□□□ 0.83
BRAT1-202ENST00000421712 GTF2E1P29083 439 aaPredicted RBP20.21■□□□□ 0.83
BRAT1-202ENST00000421712 PLBD2Q8NHP8 589 aa20.21■□□□□ 0.83
BRAT1-202ENST00000421712 HSP90AB3PQ58FF7 597 aa20.2■□□□□ 0.82
BRAT1-202ENST00000421712 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
BRAT1-202ENST00000421712 CCDC24Q8N4L8 307 aa20.2■□□□□ 0.82
BRAT1-202ENST00000421712 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
BRAT1-202ENST00000421712 NUP98P52948 1817 aa20.19■□□□□ 0.82
BRAT1-202ENST00000421712 ST5P78524 1137 aa20.19■□□□□ 0.82
BRAT1-202ENST00000421712 TPTE2Q6XPS3 522 aa20.19■□□□□ 0.82
BRAT1-202ENST00000421712 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
BRAT1-202ENST00000421712 A0A0G2JLW4 131 aa20.17■□□□□ 0.82
BRAT1-202ENST00000421712 TGFB2P61812 414 aa20.17■□□□□ 0.82
BRAT1-202ENST00000421712 TRMT2AQ8IZ69 625 aaKnown RBP20.17■□□□□ 0.82
BRAT1-202ENST00000421712 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
BRAT1-202ENST00000421712 WWC3Q9ULE0 1092 aa20.17■□□□□ 0.82
BRAT1-202ENST00000421712 AFDNP55196 1824 aaKnown RBP20.16■□□□□ 0.82
BRAT1-202ENST00000421712 GPR162Q16538 588 aa20.16■□□□□ 0.82
BRAT1-202ENST00000421712 PRR5LQ6MZQ0 368 aa20.16■□□□□ 0.82
BRAT1-202ENST00000421712 G2E3Q7L622 706 aa20.16■□□□□ 0.82
BRAT1-202ENST00000421712 PPP1R42Q7Z4L9 355 aa20.16■□□□□ 0.82
BRAT1-202ENST00000421712 ZNF34Q8IZ26 560 aa20.16■□□□□ 0.82
BRAT1-202ENST00000421712 C10orf71Q711Q0 1435 aa20.16■□□□□ 0.82
BRAT1-202ENST00000421712 DPEP1P16444 411 aa20.15■□□□□ 0.82
BRAT1-202ENST00000421712 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
BRAT1-202ENST00000421712 PARP10Q53GL7 1025 aa20.15■□□□□ 0.82
BRAT1-202ENST00000421712 SUSD4Q5VX71 490 aa20.15■□□□□ 0.82
BRAT1-202ENST00000421712 ATP10DQ9P241 1426 aa20.15■□□□□ 0.82
BRAT1-202ENST00000421712 ZBED9Q6R2W3 1325 aa20.14■□□□□ 0.81
BRAT1-202ENST00000421712 UBN2Q6ZU65 1347 aa20.14■□□□□ 0.81
BRAT1-202ENST00000421712 ATP5J2-PTCD1G3V325 749 aa20.14■□□□□ 0.81
BRAT1-202ENST00000421712 FLIIQ13045 1269 aa20.14■□□□□ 0.81
BRAT1-202ENST00000421712 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
BRAT1-202ENST00000421712 UTP14AQ9BVJ6 771 aaKnown RBP20.14■□□□□ 0.81
BRAT1-202ENST00000421712 MAP3K2Q9Y2U5 619 aa20.14■□□□□ 0.81
BRAT1-202ENST00000421712 PI4KAP2A4QPH2 592 aa20.13■□□□□ 0.81
BRAT1-202ENST00000421712 CHRNA5P30532 468 aa20.13■□□□□ 0.81
BRAT1-202ENST00000421712 PDE6BP35913 854 aa20.13■□□□□ 0.81
BRAT1-202ENST00000421712 KSR2Q6VAB6 950 aa20.13■□□□□ 0.81
BRAT1-202ENST00000421712 NUTM1Q86Y26 1132 aa20.13■□□□□ 0.81
BRAT1-202ENST00000421712 C2CD5Q86YS7 1000 aa20.13■□□□□ 0.81
BRAT1-202ENST00000421712 PI4KAP1Q8N8J0 262 aa20.13■□□□□ 0.81
BRAT1-202ENST00000421712 MYD88Q99836 296 aa20.13■□□□□ 0.81
BRAT1-202ENST00000421712 BRIP1Q9BX63 1249 aa20.13■□□□□ 0.81
BRAT1-202ENST00000421712 H0YIN7 160 aa20.12■□□□□ 0.81
BRAT1-202ENST00000421712 ERFEQ4G0M1 354 aa20.11■□□□□ 0.81
BRAT1-202ENST00000421712 NLRP10Q86W26 655 aa20.11■□□□□ 0.81
BRAT1-202ENST00000421712 METTL22Q9BUU2 404 aaPredicted RBP20.11■□□□□ 0.81
BRAT1-202ENST00000421712 TRMT112Q9UI30 125 aaKnown RBP20.11■□□□□ 0.81
BRAT1-202ENST00000421712 CACNA1FO60840 1977 aa20.11■□□□□ 0.81
BRAT1-202ENST00000421712 NRXN2Q9P2S2 1712 aa20.1■□□□□ 0.81
BRAT1-202ENST00000421712 CT47B1P0C2W7 299 aaPredicted RBP20.1■□□□□ 0.81
BRAT1-202ENST00000421712 NEXNQ0ZGT2 675 aa20.1■□□□□ 0.81
BRAT1-202ENST00000421712 ZNF622Q969S3 477 aaKnown RBP eCLIP20.1■□□□□ 0.81
BRAT1-202ENST00000421712 BCL2L13Q9BXK5 485 aa20.1■□□□□ 0.81
BRAT1-202ENST00000421712 PIM2Q9P1W9 311 aa20.1■□□□□ 0.81
BRAT1-202ENST00000421712 KIF13BQ9NQT8 1826 aa20.1■□□□□ 0.81
BRAT1-202ENST00000421712 PXDNLA1KZ92 1463 aa20.1■□□□□ 0.81
BRAT1-202ENST00000421712 N4BP2Q86UW6 1770 aaPredicted RBP20.09■□□□□ 0.81
BRAT1-202ENST00000421712 NTSR2O95665 410 aa20.09■□□□□ 0.81
BRAT1-202ENST00000421712 SSH1Q8WYL5 1049 aa20.09■□□□□ 0.81
BRAT1-202ENST00000421712 ISCA1Q9BUE6 129 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms