RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 KCNQ4P56696 695 aa27.25■■□□□ 1.95
ABCF3-202ENST00000421340 BEND3Q5T5X7 828 aa27.24■■□□□ 1.95
ABCF3-202ENST00000421340 SLC4A10Q6U841 1118 aa27.24■■□□□ 1.95
ABCF3-202ENST00000421340 KIF6Q6ZMV9 814 aa27.24■■□□□ 1.95
ABCF3-202ENST00000421340 TTLL7Q6ZT98 887 aa27.24■■□□□ 1.95
ABCF3-202ENST00000421340 METTL22Q9BUU2 404 aaPredicted RBP27.24■■□□□ 1.95
ABCF3-202ENST00000421340 ERVV-1B6SEH8 477 aa27.23■■□□□ 1.95
ABCF3-202ENST00000421340 ZBTB7BO15156 539 aaPredicted RBP27.23■■□□□ 1.95
ABCF3-202ENST00000421340 RGL2O15211 777 aa27.22■■□□□ 1.95
ABCF3-202ENST00000421340 ALDH1L1O75891 902 aa27.22■■□□□ 1.95
ABCF3-202ENST00000421340 SF3B2Q13435 895 aaKnown RBP27.22■■□□□ 1.95
ABCF3-202ENST00000421340 LINS1Q8NG48 757 aa27.22■■□□□ 1.95
ABCF3-202ENST00000421340 SRCIN1Q9C0H9 1055 aa27.22■■□□□ 1.95
ABCF3-202ENST00000421340 TNS1Q9HBL0 1735 aaKnown RBP27.21■■□□□ 1.95
ABCF3-202ENST00000421340 MAP3K15Q6ZN16 1313 aa27.21■■□□□ 1.95
ABCF3-202ENST00000421340 NEXNQ0ZGT2 675 aa27.21■■□□□ 1.95
ABCF3-202ENST00000421340 RGPD3A6NKT7 1758 aaPredicted RBP27.2■■□□□ 1.95
ABCF3-202ENST00000421340 RGPD4Q7Z3J3 1758 aa27.2■■□□□ 1.95
ABCF3-202ENST00000421340 CAMKK2Q96RR4 588 aa27.2■■□□□ 1.94
ABCF3-202ENST00000421340 DZIP3Q86Y13 1208 aaKnown RBP27.19■■□□□ 1.94
ABCF3-202ENST00000421340 ZBTB40Q9NUA8 1239 aa27.19■■□□□ 1.94
ABCF3-202ENST00000421340 PPP4R2Q9NY27 417 aa27.19■■□□□ 1.94
ABCF3-202ENST00000421340 RTCBQ9Y3I0 505 aaKnown RBP27.19■■□□□ 1.94
ABCF3-202ENST00000421340 ZNF330Q9Y3S2 320 aaPredicted RBP27.19■■□□□ 1.94
ABCF3-202ENST00000421340 AK7Q96M32 723 aa27.18■■□□□ 1.94
ABCF3-202ENST00000421340 GNPATO15228 680 aa27.17■■□□□ 1.94
ABCF3-202ENST00000421340 ADRA2BP18089 450 aa27.17■■□□□ 1.94
ABCF3-202ENST00000421340 BAG6P46379 1132 aa27.17■■□□□ 1.94
ABCF3-202ENST00000421340 HSP90AB3PQ58FF7 597 aa27.17■■□□□ 1.94
ABCF3-202ENST00000421340 GIGYF2Q6Y7W6 1299 aaKnown RBP27.17■■□□□ 1.94
ABCF3-202ENST00000421340 COL15A1P39059 1388 aa27.17■■□□□ 1.94
ABCF3-202ENST00000421340 C4BP0C0L5 1744 aa27.16■■□□□ 1.94
ABCF3-202ENST00000421340 TRIM28Q13263 835 aaKnown RBP27.16■■□□□ 1.94
ABCF3-202ENST00000421340 ZBTB3Q9H5J0 574 aa27.16■■□□□ 1.94
ABCF3-202ENST00000421340 TAF1LQ8IZX4 1826 aa27.16■■□□□ 1.94
ABCF3-202ENST00000421340 MYH14Q7Z406 1995 aaKnown RBP27.15■■□□□ 1.94
ABCF3-202ENST00000421340 IGKV5-2P06315 115 aa27.15■■□□□ 1.94
ABCF3-202ENST00000421340 TCIRG1Q13488 830 aa27.15■■□□□ 1.94
ABCF3-202ENST00000421340 MYD88Q99836 296 aa27.15■■□□□ 1.94
ABCF3-202ENST00000421340 GNAI3P08754 354 aa27.14■■□□□ 1.94
ABCF3-202ENST00000421340 CLEC4GQ6UXB4 293 aa27.14■■□□□ 1.94
ABCF3-202ENST00000421340 TBC1D2BQ9UPU7 963 aa27.14■■□□□ 1.94
ABCF3-202ENST00000421340 NEURL1BA8MQ27 555 aa27.13■■□□□ 1.93
ABCF3-202ENST00000421340 CAMTA2O94983 1202 aa27.13■■□□□ 1.93
ABCF3-202ENST00000421340 TRAPPC3LQ5T215 181 aa27.13■■□□□ 1.93
ABCF3-202ENST00000421340 ARXQ96QS3 562 aa27.13■■□□□ 1.93
ABCF3-202ENST00000421340 USP44Q9H0E7 712 aa27.13■■□□□ 1.93
ABCF3-202ENST00000421340 SSFA2P28290 1259 aa27.12■■□□□ 1.93
ABCF3-202ENST00000421340 EN1Q05925 392 aaPredicted RBP27.12■■□□□ 1.93
ABCF3-202ENST00000421340 AKT1S1Q96B36 256 aa27.12■■□□□ 1.93
ABCF3-202ENST00000421340 ISCA1Q9BUE6 129 aa27.12■■□□□ 1.93
ABCF3-202ENST00000421340 NARFQ9UHQ1 456 aa27.12■■□□□ 1.93
ABCF3-202ENST00000421340 EZH2Q15910 746 aaKnown RBP27.11■■□□□ 1.93
ABCF3-202ENST00000421340 CCDC191Q8NCU4 936 aa27.11■■□□□ 1.93
ABCF3-202ENST00000421340 HDAC5Q9UQL6 1122 aa27.11■■□□□ 1.93
ABCF3-202ENST00000421340 N4BP2Q86UW6 1770 aaPredicted RBP27.11■■□□□ 1.93
ABCF3-202ENST00000421340 UTYO14607 1347 aa27.11■■□□□ 1.93
ABCF3-202ENST00000421340 GCKRQ14397 625 aa27.1■■□□□ 1.93
ABCF3-202ENST00000421340 HLFQ16534 295 aa27.1■■□□□ 1.93
ABCF3-202ENST00000421340 CWF19L2Q2TBE0 894 aaKnown RBP27.1■■□□□ 1.93
ABCF3-202ENST00000421340 ARHGEF1Q92888 912 aaKnown RBP27.1■■□□□ 1.93
ABCF3-202ENST00000421340 ZNF652Q9Y2D9 606 aa27.1■■□□□ 1.93
ABCF3-202ENST00000421340 MEIS3Q99687 375 aa27.09■■□□□ 1.93
ABCF3-202ENST00000421340 NUP188Q5SRE5 1749 aa27.09■■□□□ 1.93
ABCF3-202ENST00000421340 EP400Q96L91 3159 aa27.09■■□□□ 1.93
ABCF3-202ENST00000421340 ARFGEF2Q9Y6D5 1785 aa27.08■■□□□ 1.93
ABCF3-202ENST00000421340 ZNF34Q8IZ26 560 aa27.08■■□□□ 1.93
ABCF3-202ENST00000421340 FLAD1Q8NFF5 587 aa27.08■■□□□ 1.93
ABCF3-202ENST00000421340 CWC25Q9NXE8 425 aaPredicted RBP27.07■■□□□ 1.92
ABCF3-202ENST00000421340 C9orf78Q9NZ63 289 aaPredicted RBP27.07■■□□□ 1.92
ABCF3-202ENST00000421340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.06■■□□□ 1.92
ABCF3-202ENST00000421340 ATP5J2-PTCD1G3V325 749 aa27.06■■□□□ 1.92
ABCF3-202ENST00000421340 GRM8O00222 908 aa27.06■■□□□ 1.92
ABCF3-202ENST00000421340 ZPR1O75312 459 aa27.06■■□□□ 1.92
ABCF3-202ENST00000421340 GNAI2P04899 355 aa27.06■■□□□ 1.92
ABCF3-202ENST00000421340 RFC4P35249 363 aa27.06■■□□□ 1.92
ABCF3-202ENST00000421340 UBTFL1P0CB47 393 aaPredicted RBP27.05■■□□□ 1.92
ABCF3-202ENST00000421340 AMIGO3Q86WK7 504 aa27.05■■□□□ 1.92
ABCF3-202ENST00000421340 TFCP2L1Q9NZI6 479 aa27.04■■□□□ 1.92
ABCF3-202ENST00000421340 PCDHB15Q9Y5E8 787 aa27.04■■□□□ 1.92
ABCF3-202ENST00000421340 H7C1W4 665 aa27.03■■□□□ 1.92
ABCF3-202ENST00000421340 NBPF7P0C2Y1 421 aaPredicted RBP27.03■■□□□ 1.92
ABCF3-202ENST00000421340 ZNF827Q17R98 1081 aa27.03■■□□□ 1.92
ABCF3-202ENST00000421340 PARP10Q53GL7 1025 aa27.03■■□□□ 1.92
ABCF3-202ENST00000421340 NLRP10Q86W26 655 aa27.03■■□□□ 1.92
ABCF3-202ENST00000421340 RPAP2Q8IXW5 612 aaPredicted RBP27.03■■□□□ 1.92
ABCF3-202ENST00000421340 CCDC136Q96JN2 1154 aa27.03■■□□□ 1.92
ABCF3-202ENST00000421340 USP42Q9H9J4 1324 aaKnown RBP27.03■■□□□ 1.92
ABCF3-202ENST00000421340 DEFB132Q7Z7B7 95 aa27.02■■□□□ 1.92
ABCF3-202ENST00000421340 BCL2L12Q9HB09 334 aa27.02■■□□□ 1.92
ABCF3-202ENST00000421340 USPL1Q5W0Q7 1092 aa27.01■■□□□ 1.91
ABCF3-202ENST00000421340 PHF14O94880 888 aa27■■□□□ 1.91
ABCF3-202ENST00000421340 SLC15A2Q16348 729 aa27■■□□□ 1.91
ABCF3-202ENST00000421340 SMIM5Q71RC9 77 aa27■■□□□ 1.91
ABCF3-202ENST00000421340 UPF1Q92900 1129 aaKnown RBP eCLIP27■■□□□ 1.91
ABCF3-202ENST00000421340 STK32BQ9NY57 414 aa27■■□□□ 1.91
ABCF3-202ENST00000421340 UBR3Q6ZT12 1888 aa27■■□□□ 1.91
ABCF3-202ENST00000421340 PCCAP05165 728 aaPredicted RBP26.99■■□□□ 1.91
ABCF3-202ENST00000421340 CASP7P55210 303 aa26.99■■□□□ 1.91
ABCF3-202ENST00000421340 HDAC1Q13547 482 aaPredicted RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms