RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 COL11A2P13942 1736 aaPredicted RBP25.03■■□□□ 1.6
VARS2-202ENST00000421263 EIF4A1P60842 406 aaKnown RBP25.02■■□□□ 1.6
VARS2-202ENST00000421263 STYK1Q6J9G0 422 aa25.02■■□□□ 1.6
VARS2-202ENST00000421263 RRAGCQ9HB90 399 aa25.02■■□□□ 1.6
VARS2-202ENST00000421263 KDM3BQ7LBC6 1761 aa25.02■■□□□ 1.6
VARS2-202ENST00000421263 C21orf2O43822 256 aa25.01■■□□□ 1.59
VARS2-202ENST00000421263 CNKSR1Q969H4 720 aa25.01■■□□□ 1.59
VARS2-202ENST00000421263 KLRG2A4D1S0 409 aaPredicted RBP25■■□□□ 1.59
VARS2-202ENST00000421263 GLTPD2A6NH11 291 aa25■■□□□ 1.59
VARS2-202ENST00000421263 APLP1P51693 650 aa25■■□□□ 1.59
VARS2-202ENST00000421263 NBPF5PQ86XG9 351 aaPredicted RBP25■■□□□ 1.59
VARS2-202ENST00000421263 MASTLQ96GX5 879 aa25■■□□□ 1.59
VARS2-202ENST00000421263 THUMPD2Q9BTF0 503 aaKnown RBP25■■□□□ 1.59
VARS2-202ENST00000421263 CCDC88AQ3V6T2 1871 aa25■■□□□ 1.59
VARS2-202ENST00000421263 NPHP1O15259 732 aa24.99■■□□□ 1.59
VARS2-202ENST00000421263 HLFQ16534 295 aa24.99■■□□□ 1.59
VARS2-202ENST00000421263 TPTE2Q6XPS3 522 aa24.99■■□□□ 1.59
VARS2-202ENST00000421263 LAMB4A4D0S4 1761 aa24.98■■□□□ 1.59
VARS2-202ENST00000421263 MAPK8IP3Q9UPT6 1336 aa24.98■■□□□ 1.59
VARS2-202ENST00000421263 FSTL1Q12841 308 aa24.98■■□□□ 1.59
VARS2-202ENST00000421263 C16orf71Q8IYS4 520 aaPredicted RBP24.98■■□□□ 1.59
VARS2-202ENST00000421263 NIP7Q9Y221 180 aaKnown RBP eCLIP24.98■■□□□ 1.59
VARS2-202ENST00000421263 FER1L6Q2WGJ9 1857 aa24.98■■□□□ 1.59
VARS2-202ENST00000421263 TNRC6CQ9HCJ0 1690 aaKnown RBP24.97■■□□□ 1.59
VARS2-202ENST00000421263 LTBP3Q9NS15 1303 aa24.97■■□□□ 1.59
VARS2-202ENST00000421263 SLX4Q8IY92 1834 aa24.97■■□□□ 1.59
VARS2-202ENST00000421263 ERVV-1B6SEH8 477 aa24.96■■□□□ 1.59
VARS2-202ENST00000421263 DNAJC5GQ8N7S2 189 aa24.96■■□□□ 1.59
VARS2-202ENST00000421263 C7orf43Q8WVR3 580 aa24.96■■□□□ 1.59
VARS2-202ENST00000421263 ZNF219Q9P2Y4 722 aaPredicted RBP24.96■■□□□ 1.59
VARS2-202ENST00000421263 PRPF40BQ6NWY9 871 aaKnown RBP24.95■■□□□ 1.58
VARS2-202ENST00000421263 VEGFAP15692 232 aaPredicted RBP24.94■■□□□ 1.58
VARS2-202ENST00000421263 DDX10Q13206 875 aaKnown RBP24.94■■□□□ 1.58
VARS2-202ENST00000421263 ARFGEF2Q9Y6D5 1785 aa24.93■■□□□ 1.58
VARS2-202ENST00000421263 NPR1P16066 1061 aa24.93■■□□□ 1.58
VARS2-202ENST00000421263 RIPK4P57078 832 aa24.93■■□□□ 1.58
VARS2-202ENST00000421263 SOGA3Q5TF21 947 aa24.93■■□□□ 1.58
VARS2-202ENST00000421263 DICER1Q9UPY3 1922 aaKnown RBP24.92■■□□□ 1.58
VARS2-202ENST00000421263 POTECB2RU33 542 aa24.92■■□□□ 1.58
VARS2-202ENST00000421263 BABAM1Q9NWV8 329 aa24.92■■□□□ 1.58
VARS2-202ENST00000421263 RRP7AQ9Y3A4 280 aaKnown RBP24.92■■□□□ 1.58
VARS2-202ENST00000421263 TIAM2Q8IVF5 1701 aa24.92■■□□□ 1.58
VARS2-202ENST00000421263 MAP3K15Q6ZN16 1313 aa24.91■■□□□ 1.58
VARS2-202ENST00000421263 TMPOP42166 694 aaKnown RBP24.91■■□□□ 1.58
VARS2-202ENST00000421263 TTLL7Q6ZT98 887 aa24.91■■□□□ 1.58
VARS2-202ENST00000421263 NGEFQ8N5V2 710 aa24.91■■□□□ 1.58
VARS2-202ENST00000421263 TAOK3Q9H2K8 898 aa24.91■■□□□ 1.58
VARS2-202ENST00000421263 ERBB4Q15303 1308 aa24.9■■□□□ 1.58
VARS2-202ENST00000421263 MYBBP1AQ9BQG0 1328 aaKnown RBP24.9■■□□□ 1.58
VARS2-202ENST00000421263 ERFEQ4G0M1 354 aa24.9■■□□□ 1.58
VARS2-202ENST00000421263 DPY19L2Q6NUT2 758 aa24.9■■□□□ 1.58
VARS2-202ENST00000421263 TSPYL4Q9UJ04 414 aa24.9■■□□□ 1.58
VARS2-202ENST00000421263 NUP98P52948 1817 aa24.89■■□□□ 1.58
VARS2-202ENST00000421263 FAM177BA6PVY3 158 aa24.89■■□□□ 1.58
VARS2-202ENST00000421263 SMC1BQ8NDV3 1235 aa24.89■■□□□ 1.58
VARS2-202ENST00000421263 CACNA1SQ13698 1873 aa24.88■■□□□ 1.57
VARS2-202ENST00000421263 MYL6BP14649 208 aa24.88■■□□□ 1.57
VARS2-202ENST00000421263 WDR90Q96KV7 1748 aa24.87■■□□□ 1.57
VARS2-202ENST00000421263 LRP10Q7Z4F1 713 aa24.87■■□□□ 1.57
VARS2-202ENST00000421263 NYXQ9GZU5 481 aa24.87■■□□□ 1.57
VARS2-202ENST00000421263 GTF2E1P29083 439 aaPredicted RBP24.86■■□□□ 1.57
VARS2-202ENST00000421263 LMOD3Q0VAK6 560 aa24.86■■□□□ 1.57
VARS2-202ENST00000421263 PDIA6Q15084 440 aa24.86■■□□□ 1.57
VARS2-202ENST00000421263 CRY2Q49AN0 593 aa24.86■■□□□ 1.57
VARS2-202ENST00000421263 CCDC93Q567U6 631 aa24.86■■□□□ 1.57
VARS2-202ENST00000421263 KIF6Q6ZMV9 814 aa24.86■■□□□ 1.57
VARS2-202ENST00000421263 ZNF34Q8IZ26 560 aa24.86■■□□□ 1.57
VARS2-202ENST00000421263 ALDH1B1P30837 517 aa24.85■■□□□ 1.57
VARS2-202ENST00000421263 GIGYF2Q6Y7W6 1299 aaKnown RBP24.85■■□□□ 1.57
VARS2-202ENST00000421263 ZBTB3Q9H5J0 574 aa24.84■■□□□ 1.57
VARS2-202ENST00000421263 UBN2Q6ZU65 1347 aa24.84■■□□□ 1.57
VARS2-202ENST00000421263 IBTKQ9P2D0 1353 aaPredicted RBP24.83■■□□□ 1.57
VARS2-202ENST00000421263 SUSD4Q5VX71 490 aa24.83■■□□□ 1.57
VARS2-202ENST00000421263 NUTM1Q86Y26 1132 aa24.83■■□□□ 1.57
VARS2-202ENST00000421263 ABCC12Q96J65 1359 aa24.82■■□□□ 1.56
VARS2-202ENST00000421263 HTRA3P83110 453 aa24.82■■□□□ 1.56
VARS2-202ENST00000421263 FKBP4Q02790 459 aaKnown RBP eCLIP24.82■■□□□ 1.56
VARS2-202ENST00000421263 RIC1Q4ADV7 1423 aa24.82■■□□□ 1.56
VARS2-202ENST00000421263 RTKN2Q8IZC4 609 aa24.82■■□□□ 1.56
VARS2-202ENST00000421263 CHL1O00533 1208 aa24.81■■□□□ 1.56
VARS2-202ENST00000421263 GPTP24298 496 aa24.81■■□□□ 1.56
VARS2-202ENST00000421263 OLFM4Q6UX06 510 aa24.81■■□□□ 1.56
VARS2-202ENST00000421263 CCDC146Q8IYE0 955 aa24.81■■□□□ 1.56
VARS2-202ENST00000421263 RUNDC1Q96C34 613 aa24.81■■□□□ 1.56
VARS2-202ENST00000421263 DDNO94850 711 aaPredicted RBP24.8■■□□□ 1.56
VARS2-202ENST00000421263 EIF2S2P20042 333 aaKnown RBP24.8■■□□□ 1.56
VARS2-202ENST00000421263 HOXA10P31260 410 aaPredicted RBP24.8■■□□□ 1.56
VARS2-202ENST00000421263 KLRG1Q96E93 195 aa24.8■■□□□ 1.56
VARS2-202ENST00000421263 TRIM35Q9UPQ4 493 aa24.8■■□□□ 1.56
VARS2-202ENST00000421263 NTSR2O95665 410 aa24.79■■□□□ 1.56
VARS2-202ENST00000421263 ADAMTS8Q9UP79 889 aa24.79■■□□□ 1.56
VARS2-202ENST00000421263 SNED1Q8TER0 1413 aa24.78■■□□□ 1.56
VARS2-202ENST00000421263 NEUROD2Q15784 382 aa24.78■■□□□ 1.56
VARS2-202ENST00000421263 PROSER3Q2NL68 480 aa24.78■■□□□ 1.56
VARS2-202ENST00000421263 PARP10Q53GL7 1025 aa24.77■■□□□ 1.56
VARS2-202ENST00000421263 JMYQ8N9B5 988 aa24.77■■□□□ 1.56
VARS2-202ENST00000421263 ANXA1P04083 346 aa24.76■■□□□ 1.55
VARS2-202ENST00000421263 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
VARS2-202ENST00000421263 SLC10A5Q5PT55 438 aa24.76■■□□□ 1.55
VARS2-202ENST00000421263 PPP1R42Q7Z4L9 355 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms