RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 SAPCD2Q86UD0 394 aa12.59□□□□□ -0.39
TRIM39-206ENST00000420746 DNAJC10Q8IXB1 793 aa12.59□□□□□ -0.39
TRIM39-206ENST00000420746 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
TRIM39-206ENST00000420746 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
TRIM39-206ENST00000420746 C7orf43Q8WVR3 580 aa12.59□□□□□ -0.39
TRIM39-206ENST00000420746 MASTLQ96GX5 879 aa12.59□□□□□ -0.39
TRIM39-206ENST00000420746 CASP8AP2Q9UKL3 1982 aa12.59□□□□□ -0.39
TRIM39-206ENST00000420746 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
TRIM39-206ENST00000420746 PPM1GO15355 546 aaPredicted RBP12.58□□□□□ -0.4
TRIM39-206ENST00000420746 MTHFSP49914 203 aa12.58□□□□□ -0.4
TRIM39-206ENST00000420746 ZNF530Q6P9A1 599 aaPredicted RBP12.58□□□□□ -0.4
TRIM39-206ENST00000420746 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
TRIM39-206ENST00000420746 HABP4Q5JVS0 413 aaKnown RBP12.57□□□□□ -0.4
TRIM39-206ENST00000420746 SAGE1Q9NXZ1 904 aa12.57□□□□□ -0.4
TRIM39-206ENST00000420746 SLX4Q8IY92 1834 aa12.57□□□□□ -0.4
TRIM39-206ENST00000420746 A0A087WZG4 1122 aa12.56□□□□□ -0.4
TRIM39-206ENST00000420746 LMOD1P29536 600 aaPredicted RBP12.56□□□□□ -0.4
TRIM39-206ENST00000420746 NOGQ13253 232 aa12.56□□□□□ -0.4
TRIM39-206ENST00000420746 USP50Q70EL3 339 aaPredicted RBP12.56□□□□□ -0.4
TRIM39-206ENST00000420746 RTKN2Q8IZC4 609 aa12.56□□□□□ -0.4
TRIM39-206ENST00000420746 TRPM7Q96QT4 1865 aa12.56□□□□□ -0.4
TRIM39-206ENST00000420746 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM39-206ENST00000420746 EIF4A2Q14240 407 aaKnown RBP12.55□□□□□ -0.4
TRIM39-206ENST00000420746 C1orf141Q5JVX7 400 aa12.55□□□□□ -0.4
TRIM39-206ENST00000420746 TBC1D9BQ66K14 1250 aa12.55□□□□□ -0.4
TRIM39-206ENST00000420746 CIAPIN1Q6FI81 312 aa12.55□□□□□ -0.4
TRIM39-206ENST00000420746 BICDL1Q6ZP65 573 aa12.55□□□□□ -0.4
TRIM39-206ENST00000420746 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
TRIM39-206ENST00000420746 CNBD1Q8NA66 436 aa12.55□□□□□ -0.4
TRIM39-206ENST00000420746 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
TRIM39-206ENST00000420746 TRAF5O00463 557 aa12.54□□□□□ -0.4
TRIM39-206ENST00000420746 IARSP41252 1262 aaKnown RBP12.54□□□□□ -0.4
TRIM39-206ENST00000420746 EIF5P55010 431 aaKnown RBP12.54□□□□□ -0.4
TRIM39-206ENST00000420746 ST5P78524 1137 aa12.54□□□□□ -0.4
TRIM39-206ENST00000420746 SCN7AQ01118 1682 aa12.54□□□□□ -0.4
TRIM39-206ENST00000420746 SCNN1DP51172 638 aa12.53□□□□□ -0.4
TRIM39-206ENST00000420746 POLKQ9UBT6 870 aa12.53□□□□□ -0.4
TRIM39-206ENST00000420746 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
TRIM39-206ENST00000420746 CELF2O95319 508 aaKnown RBP12.52□□□□□ -0.41
TRIM39-206ENST00000420746 CTU1Q7Z7A3 348 aaKnown RBP12.52□□□□□ -0.41
TRIM39-206ENST00000420746 JDP2Q8WYK2 163 aa12.52□□□□□ -0.41
TRIM39-206ENST00000420746 MRC1P22897 1456 aa12.52□□□□□ -0.41
TRIM39-206ENST00000420746 KLRG2A4D1S0 409 aaPredicted RBP12.51□□□□□ -0.41
TRIM39-206ENST00000420746 NPR1P16066 1061 aa12.51□□□□□ -0.41
TRIM39-206ENST00000420746 EIF6P56537 245 aaKnown RBP12.51□□□□□ -0.41
TRIM39-206ENST00000420746 SIN3AQ96ST3 1273 aa12.51□□□□□ -0.41
TRIM39-206ENST00000420746 PSMD1Q99460 953 aa12.51□□□□□ -0.41
TRIM39-206ENST00000420746 SLC52A2Q9HAB3 445 aa12.51□□□□□ -0.41
TRIM39-206ENST00000420746 NPHP1O15259 732 aa12.5□□□□□ -0.41
TRIM39-206ENST00000420746 EPS15P42566 896 aa12.5□□□□□ -0.41
TRIM39-206ENST00000420746 PKN2Q16513 984 aaKnown RBP12.5□□□□□ -0.41
TRIM39-206ENST00000420746 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
TRIM39-206ENST00000420746 CCDC24Q8N4L8 307 aa12.5□□□□□ -0.41
TRIM39-206ENST00000420746 SETDB2Q96T68 719 aa12.5□□□□□ -0.41
TRIM39-206ENST00000420746 SNED1Q8TER0 1413 aa12.5□□□□□ -0.41
TRIM39-206ENST00000420746 SCN11AQ9UI33 1791 aa12.49□□□□□ -0.41
TRIM39-206ENST00000420746 STARD3NLO95772 234 aa12.49□□□□□ -0.41
TRIM39-206ENST00000420746 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
TRIM39-206ENST00000420746 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
TRIM39-206ENST00000420746 ADARB2Q9NS39 739 aaKnown RBP12.49□□□□□ -0.41
TRIM39-206ENST00000420746 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
TRIM39-206ENST00000420746 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
TRIM39-206ENST00000420746 FXR1P51114 621 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRIM39-206ENST00000420746 CARD14Q9BXL6 1004 aa12.48□□□□□ -0.41
TRIM39-206ENST00000420746 PGAP2Q9UHJ9 254 aa12.48□□□□□ -0.41
TRIM39-206ENST00000420746 HPS5Q9UPZ3 1129 aa12.48□□□□□ -0.41
TRIM39-206ENST00000420746 NEUROD1Q13562 356 aa12.47□□□□□ -0.41
TRIM39-206ENST00000420746 CDCA8Q53HL2 280 aa12.47□□□□□ -0.41
TRIM39-206ENST00000420746 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
TRIM39-206ENST00000420746 ZC3H15Q8WU90 426 aaKnown RBP12.47□□□□□ -0.41
TRIM39-206ENST00000420746 ALDH1B1P30837 517 aa12.46□□□□□ -0.41
TRIM39-206ENST00000420746 IL6STP40189 918 aaPredicted RBP12.46□□□□□ -0.41
TRIM39-206ENST00000420746 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
TRIM39-206ENST00000420746 ZIC5Q96T25 663 aa12.46□□□□□ -0.41
TRIM39-206ENST00000420746 CAMTA2O94983 1202 aa12.45□□□□□ -0.42
TRIM39-206ENST00000420746 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
TRIM39-206ENST00000420746 CCDC102AQ96A19 550 aa12.45□□□□□ -0.42
TRIM39-206ENST00000420746 RNF186Q9NXI6 227 aa12.45□□□□□ -0.42
TRIM39-206ENST00000420746 GPRC5DQ9NZD1 345 aa12.45□□□□□ -0.42
TRIM39-206ENST00000420746 COL4A5P29400 1685 aa12.45□□□□□ -0.42
TRIM39-206ENST00000420746 CDHR2Q9BYE9 1310 aa12.44□□□□□ -0.42
TRIM39-206ENST00000420746 FAM155AB1AL88 458 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-206ENST00000420746 HUNKP57058 714 aa12.44□□□□□ -0.42
TRIM39-206ENST00000420746 OLFM4Q6UX06 510 aa12.44□□□□□ -0.42
TRIM39-206ENST00000420746 CDC37L1Q7L3B6 337 aa12.44□□□□□ -0.42
TRIM39-206ENST00000420746 TEX13AQ9BXU3 409 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-206ENST00000420746 GLIS2Q9BZE0 524 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-206ENST00000420746 TBC1D2BQ9UPU7 963 aa12.44□□□□□ -0.42
TRIM39-206ENST00000420746 MKI67P46013 3256 aaKnown RBP12.43□□□□□ -0.42
TRIM39-206ENST00000420746 UBR2Q8IWV8 1755 aa12.43□□□□□ -0.42
TRIM39-206ENST00000420746 DLL1O00548 723 aa12.43□□□□□ -0.42
TRIM39-206ENST00000420746 TRPA1O75762 1119 aa12.43□□□□□ -0.42
TRIM39-206ENST00000420746 RGMBQ6NW40 437 aa12.43□□□□□ -0.42
TRIM39-206ENST00000420746 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
TRIM39-206ENST00000420746 REM2Q8IYK8 340 aaPredicted RBP12.43□□□□□ -0.42
TRIM39-206ENST00000420746 RGL2O15211 777 aa12.42□□□□□ -0.42
TRIM39-206ENST00000420746 RNMTO43148 476 aaKnown RBP12.42□□□□□ -0.42
TRIM39-206ENST00000420746 CLEC4GQ6UXB4 293 aa12.42□□□□□ -0.42
TRIM39-206ENST00000420746 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
TRIM39-206ENST00000420746 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms