RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 STK3Q13188 491 aa17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 CCDC83Q8IWF9 413 aa17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 PCMTD1Q96MG8 357 aaPredicted RBP17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 UBAC1Q9BSL1 405 aa17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 RNF41Q9H4P4 317 aaPredicted RBP17.39■□□□□ 0.37
AP000550.1-201ENST00000420508 ANKRD13DQ6ZTN6 518 aa17.39■□□□□ 0.37
AP000550.1-201ENST00000420508 EYA1Q99502 592 aa17.39■□□□□ 0.37
AP000550.1-201ENST00000420508 ANKRD18BA2A2Z9 1011 aa17.39■□□□□ 0.37
AP000550.1-201ENST00000420508 GRM8O00222 908 aa17.39■□□□□ 0.37
AP000550.1-201ENST00000420508 PHAXQ9H814 394 aaKnown RBP17.39■□□□□ 0.37
AP000550.1-201ENST00000420508 ZNF287Q9HBT7 754 aa17.38■□□□□ 0.37
AP000550.1-201ENST00000420508 SLC5A1P13866 664 aa17.38■□□□□ 0.37
AP000550.1-201ENST00000420508 STX6O43752 255 aa17.38■□□□□ 0.37
AP000550.1-201ENST00000420508 MAP3K12Q12852 859 aa17.38■□□□□ 0.37
AP000550.1-201ENST00000420508 TXLNBQ8N3L3 684 aa17.38■□□□□ 0.37
AP000550.1-201ENST00000420508 ZSCAN16Q9H4T2 348 aaPredicted RBP17.38■□□□□ 0.37
AP000550.1-201ENST00000420508 SMC2O95347 1197 aa17.38■□□□□ 0.37
AP000550.1-201ENST00000420508 TDO2P48775 406 aa17.38■□□□□ 0.37
AP000550.1-201ENST00000420508 STIM1Q13586 685 aa17.37■□□□□ 0.37
AP000550.1-201ENST00000420508 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
AP000550.1-201ENST00000420508 SETBP1Q9Y6X0 1596 aa17.37■□□□□ 0.37
AP000550.1-201ENST00000420508 UBE2HP62256 183 aa17.37■□□□□ 0.37
AP000550.1-201ENST00000420508 C19orf44Q9H6X5 657 aa17.37■□□□□ 0.37
AP000550.1-201ENST00000420508 ANO10Q9NW15 660 aa17.37■□□□□ 0.37
AP000550.1-201ENST00000420508 CHPF2Q9P2E5 772 aa17.37■□□□□ 0.37
AP000550.1-201ENST00000420508 LMTK2Q8IWU2 1503 aa17.37■□□□□ 0.37
AP000550.1-201ENST00000420508 NEMFO60524 1076 aa17.36■□□□□ 0.37
AP000550.1-201ENST00000420508 UQCRFS1P1P0C7P4 283 aa17.36■□□□□ 0.37
AP000550.1-201ENST00000420508 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
AP000550.1-201ENST00000420508 CLTCL1P53675 1640 aa17.36■□□□□ 0.37
AP000550.1-201ENST00000420508 PLEKHG1Q9ULL1 1385 aa17.36■□□□□ 0.37
AP000550.1-201ENST00000420508 SYCE3A1L190 88 aa17.36■□□□□ 0.37
AP000550.1-201ENST00000420508 RRP12Q5JTH9 1297 aaKnown RBP17.36■□□□□ 0.37
AP000550.1-201ENST00000420508 TMX3Q96JJ7 454 aa17.36■□□□□ 0.37
AP000550.1-201ENST00000420508 CTDP1Q9Y5B0 961 aaPredicted RBP17.36■□□□□ 0.37
AP000550.1-201ENST00000420508 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
AP000550.1-201ENST00000420508 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
AP000550.1-201ENST00000420508 CCDC8Q9H0W5 538 aaPredicted RBP17.35■□□□□ 0.37
AP000550.1-201ENST00000420508 MAGEC2Q9UBF1 373 aaPredicted RBP17.35■□□□□ 0.37
AP000550.1-201ENST00000420508 ERCC4Q92889 916 aaPredicted RBP17.35■□□□□ 0.37
AP000550.1-201ENST00000420508 TCEAL9Q9UHQ7 104 aa17.35■□□□□ 0.37
AP000550.1-201ENST00000420508 ABCC4O15439 1325 aa17.35■□□□□ 0.37
AP000550.1-201ENST00000420508 IL15P40933 162 aaPredicted RBP17.34■□□□□ 0.37
AP000550.1-201ENST00000420508 DCAF5Q96JK2 942 aa17.34■□□□□ 0.37
AP000550.1-201ENST00000420508 LRP2BPQ9P2M1 347 aa17.34■□□□□ 0.37
AP000550.1-201ENST00000420508 MADDQ8WXG6 1647 aa17.34■□□□□ 0.37
AP000550.1-201ENST00000420508 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
AP000550.1-201ENST00000420508 ZRANB1Q9UGI0 708 aa17.34■□□□□ 0.37
AP000550.1-201ENST00000420508 ABCA9Q8IUA7 1624 aa17.34■□□□□ 0.37
AP000550.1-201ENST00000420508 NEK1Q96PY6 1258 aa17.33■□□□□ 0.37
AP000550.1-201ENST00000420508 NLRP1Q9C000 1473 aa17.33■□□□□ 0.37
AP000550.1-201ENST00000420508 ZNF213O14771 459 aa17.33■□□□□ 0.37
AP000550.1-201ENST00000420508 RNF17Q9BXT8 1623 aaKnown RBP17.33■□□□□ 0.36
AP000550.1-201ENST00000420508 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
AP000550.1-201ENST00000420508 CCAR2Q8N163 923 aaKnown RBP17.33■□□□□ 0.36
AP000550.1-201ENST00000420508 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 C8orf76Q96K31 380 aa17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 YEATS2Q9ULM3 1422 aa17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 SERPINC1P01008 464 aa17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 PYM1Q9BRP8 204 aaKnown RBP17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 NAPBQ9H115 298 aa17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 FBLN1P23142 703 aa17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 GJB2P29033 226 aa17.32■□□□□ 0.36
AP000550.1-201ENST00000420508 RNMTO43148 476 aaKnown RBP17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 CDK5RAP3Q96JB5 506 aa17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 DDX21Q9NR30 783 aaKnown RBP eCLIP17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 EXOC5O00471 708 aa17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 LRRIQ1Q96JM4 1722 aa17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 PTCD1O75127 700 aaKnown RBP17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 CEBPZQ03701 1054 aaKnown RBP17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 SOGA3Q5TF21 947 aa17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 USP26Q9BXU7 913 aa17.31■□□□□ 0.36
AP000550.1-201ENST00000420508 GCP02774 474 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 LRSAM1Q6UWE0 723 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 UBE3BQ7Z3V4 1068 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 LUC7LQ9NQ29 371 aaKnown RBP17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 PDILTQ8N807 584 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 TRMT112Q9UI30 125 aaKnown RBP17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 TNNQ9UQP3 1299 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 PPFIBP1Q86W92 1011 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 CDC5LQ99459 802 aaKnown RBP17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 HS1BP3Q53T59 392 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 XAGE3Q8WTP9 111 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 PLEKHF1Q96S99 279 aa17.3■□□□□ 0.36
AP000550.1-201ENST00000420508 KCNA6P17658 529 aa17.29■□□□□ 0.36
AP000550.1-201ENST00000420508 CCDC112Q8NEF3 446 aa17.29■□□□□ 0.36
AP000550.1-201ENST00000420508 ZNHIT6Q9NWK9 470 aaKnown RBP17.29■□□□□ 0.36
AP000550.1-201ENST00000420508 PDCL2Q8N4E4 241 aa17.29■□□□□ 0.36
AP000550.1-201ENST00000420508 UGGT1Q9NYU2 1555 aa17.29■□□□□ 0.36
AP000550.1-201ENST00000420508 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
AP000550.1-201ENST00000420508 NCOA7Q8NI08 942 aa17.29■□□□□ 0.36
AP000550.1-201ENST00000420508 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
AP000550.1-201ENST00000420508 ADGRB3O60242 1522 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms