RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 PIP4K2BP78356 416 aa18.69■□□□□ 0.58
SEC24D-202ENST00000419654 CASC1Q6TDU7 716 aa18.69■□□□□ 0.58
SEC24D-202ENST00000419654 USP16Q9Y5T5 823 aa18.69■□□□□ 0.58
SEC24D-202ENST00000419654 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
SEC24D-202ENST00000419654 KCPQ6ZWJ8 1503 aa18.69■□□□□ 0.58
SEC24D-202ENST00000419654 IL1RAPL2Q9NP60 686 aa18.69■□□□□ 0.58
SEC24D-202ENST00000419654 MAP3K2Q9Y2U5 619 aa18.69■□□□□ 0.58
SEC24D-202ENST00000419654 MAP4K4O95819 1239 aaPredicted RBP18.68■□□□□ 0.58
SEC24D-202ENST00000419654 UBTFL1P0CB47 393 aaPredicted RBP18.68■□□□□ 0.58
SEC24D-202ENST00000419654 LRP10Q7Z4F1 713 aa18.68■□□□□ 0.58
SEC24D-202ENST00000419654 BAG4O95429 457 aaKnown RBP18.68■□□□□ 0.58
SEC24D-202ENST00000419654 ATP8B2P98198 1209 aa18.68■□□□□ 0.58
SEC24D-202ENST00000419654 TNS2Q63HR2 1409 aa18.68■□□□□ 0.58
SEC24D-202ENST00000419654 MRE11P49959 708 aa18.67■□□□□ 0.58
SEC24D-202ENST00000419654 DDX49Q9Y6V7 483 aaKnown RBP18.67■□□□□ 0.58
SEC24D-202ENST00000419654 DDX58O95786 925 aaKnown RBP18.67■□□□□ 0.58
SEC24D-202ENST00000419654 ALDH1L1O75891 902 aa18.66■□□□□ 0.58
SEC24D-202ENST00000419654 ADAMTS2O95450 1211 aa18.66■□□□□ 0.58
SEC24D-202ENST00000419654 ERC2O15083 957 aa18.65■□□□□ 0.58
SEC24D-202ENST00000419654 UNC5CLQ8IV45 518 aa18.65■□□□□ 0.58
SEC24D-202ENST00000419654 NBPF7P0C2Y1 421 aaPredicted RBP18.64■□□□□ 0.58
SEC24D-202ENST00000419654 MYL6BP14649 208 aa18.64■□□□□ 0.58
SEC24D-202ENST00000419654 NUTM1Q86Y26 1132 aa18.64■□□□□ 0.58
SEC24D-202ENST00000419654 IBTKQ9P2D0 1353 aaPredicted RBP18.64■□□□□ 0.58
SEC24D-202ENST00000419654 NWD2Q9ULI1 1742 aa18.64■□□□□ 0.57
SEC24D-202ENST00000419654 NEK4P51957 841 aa18.64■□□□□ 0.57
SEC24D-202ENST00000419654 FOXD4L6Q3SYB3 417 aaPredicted RBP18.64■□□□□ 0.57
SEC24D-202ENST00000419654 FOXD4L3Q6VB84 417 aaPredicted RBP18.64■□□□□ 0.57
SEC24D-202ENST00000419654 LRRCC1Q9C099 1032 aa18.64■□□□□ 0.57
SEC24D-202ENST00000419654 LRP6O75581 1613 aa18.64■□□□□ 0.57
SEC24D-202ENST00000419654 UBAP1LF5GYI3 381 aa18.64■□□□□ 0.57
SEC24D-202ENST00000419654 AIMP1Q12904 312 aaKnown RBP18.64■□□□□ 0.57
SEC24D-202ENST00000419654 XAGE3Q8WTP9 111 aa18.64■□□□□ 0.57
SEC24D-202ENST00000419654 PALD1Q9ULE6 856 aa18.64■□□□□ 0.57
SEC24D-202ENST00000419654 REC8O95072 547 aa18.63■□□□□ 0.57
SEC24D-202ENST00000419654 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
SEC24D-202ENST00000419654 ERBB4Q15303 1308 aa18.63■□□□□ 0.57
SEC24D-202ENST00000419654 ITGB4P16144 1822 aa18.63■□□□□ 0.57
SEC24D-202ENST00000419654 SPATA31A1Q5TZJ5 1347 aa18.63■□□□□ 0.57
SEC24D-202ENST00000419654 COPS6Q7L5N1 327 aa18.63■□□□□ 0.57
SEC24D-202ENST00000419654 ANO2Q9NQ90 1003 aa18.63■□□□□ 0.57
SEC24D-202ENST00000419654 GOLGA6L22H0YM25 854 aa18.62■□□□□ 0.57
SEC24D-202ENST00000419654 ST18O60284 1047 aa18.62■□□□□ 0.57
SEC24D-202ENST00000419654 MX1P20591 662 aa18.62■□□□□ 0.57
SEC24D-202ENST00000419654 SSH3Q8TE77 659 aa18.62■□□□□ 0.57
SEC24D-202ENST00000419654 TMOD3Q9NYL9 352 aa18.62■□□□□ 0.57
SEC24D-202ENST00000419654 SLIT2O94813 1529 aa18.62■□□□□ 0.57
SEC24D-202ENST00000419654 THRAP3Q9Y2W1 955 aaKnown RBP18.62■□□□□ 0.57
SEC24D-202ENST00000419654 CAVIN1Q6NZI2 390 aaKnown RBP18.61■□□□□ 0.57
SEC24D-202ENST00000419654 EXOC5O00471 708 aa18.61■□□□□ 0.57
SEC24D-202ENST00000419654 CWF19L2Q2TBE0 894 aaKnown RBP18.61■□□□□ 0.57
SEC24D-202ENST00000419654 TPRNQ4KMQ1 711 aa18.61■□□□□ 0.57
SEC24D-202ENST00000419654 RIC3Q7Z5B4 369 aa18.61■□□□□ 0.57
SEC24D-202ENST00000419654 CDCA7Q9BWT1 371 aaPredicted RBP18.61■□□□□ 0.57
SEC24D-202ENST00000419654 UTYO14607 1347 aa18.6■□□□□ 0.57
SEC24D-202ENST00000419654 NUTM2BA6NNL0 878 aaPredicted RBP18.6■□□□□ 0.57
SEC24D-202ENST00000419654 NUTM2EB1AL46 878 aaPredicted RBP18.6■□□□□ 0.57
SEC24D-202ENST00000419654 POLA2Q14181 598 aa18.6■□□□□ 0.57
SEC24D-202ENST00000419654 NUTM2AQ8IVF1 878 aaPredicted RBP18.6■□□□□ 0.57
SEC24D-202ENST00000419654 UPF3BQ9BZI7 483 aaKnown RBP18.6■□□□□ 0.57
SEC24D-202ENST00000419654 IL25Q9H293 177 aa18.6■□□□□ 0.57
SEC24D-202ENST00000419654 DTNBO60941 627 aa18.6■□□□□ 0.57
SEC24D-202ENST00000419654 PRPF40AO75400 957 aaKnown RBP18.6■□□□□ 0.57
SEC24D-202ENST00000419654 PIGBQ92521 554 aa18.6■□□□□ 0.57
SEC24D-202ENST00000419654 RBM27Q9P2N5 1060 aaKnown RBP18.6■□□□□ 0.57
SEC24D-202ENST00000419654 IGKV5-2P06315 115 aa18.59■□□□□ 0.57
SEC24D-202ENST00000419654 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
SEC24D-202ENST00000419654 SKOR2Q2VWA4 1001 aaPredicted RBP18.59■□□□□ 0.57
SEC24D-202ENST00000419654 ANKRD13DQ6ZTN6 518 aa18.59■□□□□ 0.57
SEC24D-202ENST00000419654 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
SEC24D-202ENST00000419654 METTL22Q9BUU2 404 aaPredicted RBP18.59■□□□□ 0.57
SEC24D-202ENST00000419654 ARFGEF2Q9Y6D5 1785 aa18.59■□□□□ 0.57
SEC24D-202ENST00000419654 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
SEC24D-202ENST00000419654 PTCD1O75127 700 aaKnown RBP18.59■□□□□ 0.57
SEC24D-202ENST00000419654 NBPF14Q5TI25 921 aa18.59■□□□□ 0.57
SEC24D-202ENST00000419654 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
SEC24D-202ENST00000419654 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
SEC24D-202ENST00000419654 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
SEC24D-202ENST00000419654 C9orf78Q9NZ63 289 aaPredicted RBP18.59■□□□□ 0.57
SEC24D-202ENST00000419654 ZDHHC9Q9Y397 364 aa18.59■□□□□ 0.57
SEC24D-202ENST00000419654 SURF6O75683 361 aaKnown RBP18.58■□□□□ 0.56
SEC24D-202ENST00000419654 MTX1Q13505 466 aa18.58■□□□□ 0.56
SEC24D-202ENST00000419654 LARP6Q9BRS8 491 aaKnown RBP18.58■□□□□ 0.56
SEC24D-202ENST00000419654 SPATA31A5Q5VU36 1347 aa18.58■□□□□ 0.56
SEC24D-202ENST00000419654 SPATA31A7Q8IWB4 1347 aa18.58■□□□□ 0.56
SEC24D-202ENST00000419654 BCL9O00512 1426 aa18.58■□□□□ 0.56
SEC24D-202ENST00000419654 GRM8O00222 908 aa18.57■□□□□ 0.56
SEC24D-202ENST00000419654 HDAC5Q9UQL6 1122 aa18.57■□□□□ 0.56
SEC24D-202ENST00000419654 NEURL1BA8MQ27 555 aa18.57■□□□□ 0.56
SEC24D-202ENST00000419654 NEXNQ0ZGT2 675 aa18.57■□□□□ 0.56
SEC24D-202ENST00000419654 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
SEC24D-202ENST00000419654 CHMLP26374 656 aa18.56■□□□□ 0.56
SEC24D-202ENST00000419654 TMX3Q96JJ7 454 aa18.56■□□□□ 0.56
SEC24D-202ENST00000419654 OSBPL3Q9H4L5 887 aa18.56■□□□□ 0.56
SEC24D-202ENST00000419654 ATG3Q9NT62 314 aa18.56■□□□□ 0.56
SEC24D-202ENST00000419654 SRGAP3O43295 1099 aa18.56■□□□□ 0.56
SEC24D-202ENST00000419654 NUCB2P80303 420 aa18.56■□□□□ 0.56
SEC24D-202ENST00000419654 VSIG10Q8N0Z9 540 aa18.56■□□□□ 0.56
SEC24D-202ENST00000419654 JCADQ9P266 1359 aa18.55■□□□□ 0.56
SEC24D-202ENST00000419654 PLBD2Q8NHP8 589 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms