RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 INTS5Q6P9B9 1019 aaKnown RBP16.12■□□□□ 0.17
LINC00642-201ENST00000419459 SLC4A10Q6U841 1118 aa16.12■□□□□ 0.17
LINC00642-201ENST00000419459 HYPKQ9NX55 129 aa16.12■□□□□ 0.17
LINC00642-201ENST00000419459 PI4KAP2A4QPH2 592 aa16.12■□□□□ 0.17
LINC00642-201ENST00000419459 IPO8O15397 1037 aaKnown RBP16.12■□□□□ 0.17
LINC00642-201ENST00000419459 TXNRD1Q16881 649 aa16.12■□□□□ 0.17
LINC00642-201ENST00000419459 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
LINC00642-201ENST00000419459 PI4KAP1Q8N8J0 262 aa16.12■□□□□ 0.17
LINC00642-201ENST00000419459 EN1Q05925 392 aaPredicted RBP16.11■□□□□ 0.17
LINC00642-201ENST00000419459 TTLL7Q6ZT98 887 aa16.11■□□□□ 0.17
LINC00642-201ENST00000419459 DZIP1LQ8IYY4 767 aaKnown RBP16.11■□□□□ 0.17
LINC00642-201ENST00000419459 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
LINC00642-201ENST00000419459 C4BP0C0L5 1744 aa16.11■□□□□ 0.17
LINC00642-201ENST00000419459 PTPRCP08575 1304 aa16.11■□□□□ 0.17
LINC00642-201ENST00000419459 DEFB132Q7Z7B7 95 aa16.11■□□□□ 0.17
LINC00642-201ENST00000419459 TMEM57Q8N5G2 664 aa16.11■□□□□ 0.17
LINC00642-201ENST00000419459 ADCY9O60503 1353 aa16.1■□□□□ 0.17
LINC00642-201ENST00000419459 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
LINC00642-201ENST00000419459 CHMP4AQ9BY43 222 aa16.1■□□□□ 0.17
LINC00642-201ENST00000419459 RREB1Q92766 1687 aa16.09■□□□□ 0.17
LINC00642-201ENST00000419459 ITPRIPQ8IWB1 547 aa16.09■□□□□ 0.17
LINC00642-201ENST00000419459 ZBTB3Q9H5J0 574 aa16.09■□□□□ 0.17
LINC00642-201ENST00000419459 PLSCR1O15162 318 aa16.09■□□□□ 0.17
LINC00642-201ENST00000419459 GNPATO15228 680 aa16.09■□□□□ 0.17
LINC00642-201ENST00000419459 EZH2Q15910 746 aaKnown RBP16.09■□□□□ 0.17
LINC00642-201ENST00000419459 ARHGAP45Q92619 1136 aa16.09■□□□□ 0.17
LINC00642-201ENST00000419459 MAP3K2Q9Y2U5 619 aa16.09■□□□□ 0.17
LINC00642-201ENST00000419459 ABCC4O15439 1325 aa16.09■□□□□ 0.17
LINC00642-201ENST00000419459 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
LINC00642-201ENST00000419459 PDE3AQ14432 1141 aa16.08■□□□□ 0.16
LINC00642-201ENST00000419459 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
LINC00642-201ENST00000419459 PHF14O94880 888 aa16.07■□□□□ 0.16
LINC00642-201ENST00000419459 API5Q9BZZ5 524 aaKnown RBP16.07■□□□□ 0.16
LINC00642-201ENST00000419459 NUP188Q5SRE5 1749 aa16.07■□□□□ 0.16
LINC00642-201ENST00000419459 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
LINC00642-201ENST00000419459 RIC3Q7Z5B4 369 aa16.07■□□□□ 0.16
LINC00642-201ENST00000419459 FRAT2O75474 233 aaPredicted RBP16.06■□□□□ 0.16
LINC00642-201ENST00000419459 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
LINC00642-201ENST00000419459 EIF5P55010 431 aaKnown RBP16.06■□□□□ 0.16
LINC00642-201ENST00000419459 SLC27A3Q5K4L6 730 aa16.06■□□□□ 0.16
LINC00642-201ENST00000419459 DNAAF4Q8WXU2 420 aa16.06■□□□□ 0.16
LINC00642-201ENST00000419459 RGPD3A6NKT7 1758 aaPredicted RBP16.06■□□□□ 0.16
LINC00642-201ENST00000419459 RGPD4Q7Z3J3 1758 aa16.06■□□□□ 0.16
LINC00642-201ENST00000419459 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
LINC00642-201ENST00000419459 COL15A1P39059 1388 aa16.06■□□□□ 0.16
LINC00642-201ENST00000419459 SLC4A3P48751 1232 aa16.06■□□□□ 0.16
LINC00642-201ENST00000419459 SF3B2Q13435 895 aaKnown RBP16.06■□□□□ 0.16
LINC00642-201ENST00000419459 MVPQ14764 893 aaKnown RBP16.06■□□□□ 0.16
LINC00642-201ENST00000419459 CWF19L2Q2TBE0 894 aaKnown RBP16.06■□□□□ 0.16
LINC00642-201ENST00000419459 KSR2Q6VAB6 950 aa16.06■□□□□ 0.16
LINC00642-201ENST00000419459 CNTNAP4Q9C0A0 1308 aa16.06■□□□□ 0.16
LINC00642-201ENST00000419459 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
LINC00642-201ENST00000419459 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
LINC00642-201ENST00000419459 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
LINC00642-201ENST00000419459 AK7Q96M32 723 aa16.04■□□□□ 0.16
LINC00642-201ENST00000419459 CAMKK2Q96RR4 588 aa16.04■□□□□ 0.16
LINC00642-201ENST00000419459 NUP98P52948 1817 aa16.04■□□□□ 0.16
LINC00642-201ENST00000419459 AFDNP55196 1824 aaKnown RBP16.04■□□□□ 0.16
LINC00642-201ENST00000419459 TUBGCP6Q96RT7 1819 aa16.04■□□□□ 0.16
LINC00642-201ENST00000419459 N4BP2Q86UW6 1770 aaPredicted RBP16.04■□□□□ 0.16
LINC00642-201ENST00000419459 UTRNP46939 3433 aa16.04■□□□□ 0.16
LINC00642-201ENST00000419459 ATP5J2-PTCD1G3V325 749 aa16.04■□□□□ 0.16
LINC00642-201ENST00000419459 HLFQ16534 295 aa16.04■□□□□ 0.16
LINC00642-201ENST00000419459 ZNF827Q17R98 1081 aa16.04■□□□□ 0.16
LINC00642-201ENST00000419459 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
LINC00642-201ENST00000419459 BECN1Q14457 450 aa16.03■□□□□ 0.16
LINC00642-201ENST00000419459 ILDR2Q71H61 639 aa16.03■□□□□ 0.16
LINC00642-201ENST00000419459 SKAP1Q86WV1 359 aa16.03■□□□□ 0.16
LINC00642-201ENST00000419459 PLBD2Q8NHP8 589 aa16.03■□□□□ 0.16
LINC00642-201ENST00000419459 MYD88Q99836 296 aa16.03■□□□□ 0.16
LINC00642-201ENST00000419459 RTCBQ9Y3I0 505 aaKnown RBP16.03■□□□□ 0.16
LINC00642-201ENST00000419459 BAG6P46379 1132 aa16.02■□□□□ 0.16
LINC00642-201ENST00000419459 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.16
LINC00642-201ENST00000419459 IGKV5-2P06315 115 aa16.02■□□□□ 0.15
LINC00642-201ENST00000419459 BEND3Q5T5X7 828 aa16.02■□□□□ 0.15
LINC00642-201ENST00000419459 RC3H1Q5TC82 1133 aaKnown RBP16.02■□□□□ 0.15
LINC00642-201ENST00000419459 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.15
LINC00642-201ENST00000419459 MAP3K15Q6ZN16 1313 aa16.01■□□□□ 0.15
LINC00642-201ENST00000419459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
LINC00642-201ENST00000419459 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
LINC00642-201ENST00000419459 MEIS3Q99687 375 aa16.01■□□□□ 0.15
LINC00642-201ENST00000419459 C1orf115Q9H7X2 142 aa16.01■□□□□ 0.15
LINC00642-201ENST00000419459 SRP68Q9UHB9 627 aaKnown RBP16.01■□□□□ 0.15
LINC00642-201ENST00000419459 PXDNLA1KZ92 1463 aa16.01■□□□□ 0.15
LINC00642-201ENST00000419459 EIF5BO60841 1220 aaKnown RBP16.01■□□□□ 0.15
LINC00642-201ENST00000419459 ARHGEF1Q92888 912 aaKnown RBP16.01■□□□□ 0.15
LINC00642-201ENST00000419459 METTL22Q9BUU2 404 aaPredicted RBP16.01■□□□□ 0.15
LINC00642-201ENST00000419459 BCORQ6W2J9 1755 aa16■□□□□ 0.15
LINC00642-201ENST00000419459 GPTP24298 496 aa16■□□□□ 0.15
LINC00642-201ENST00000419459 SRCIN1Q9C0H9 1055 aa16■□□□□ 0.15
LINC00642-201ENST00000419459 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
LINC00642-201ENST00000419459 CAMTA2O94983 1202 aa15.99■□□□□ 0.15
LINC00642-201ENST00000419459 CCT4P50991 539 aaKnown RBP15.99■□□□□ 0.15
LINC00642-201ENST00000419459 JARID2Q92833 1246 aaPredicted RBP15.99■□□□□ 0.15
LINC00642-201ENST00000419459 DDX19BQ9UMR2 479 aa15.99■□□□□ 0.15
LINC00642-201ENST00000419459 ANKRD36CQ5JPF3 1778 aa15.99■□□□□ 0.15
LINC00642-201ENST00000419459 ZBTB7BO15156 539 aaPredicted RBP15.99■□□□□ 0.15
LINC00642-201ENST00000419459 NEXNQ0ZGT2 675 aa15.99■□□□□ 0.15
LINC00642-201ENST00000419459 UPF1Q92900 1129 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC00642-201ENST00000419459 SCN7AQ01118 1682 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms