RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 COPS6Q7L5N1 327 aa25.33■■□□□ 1.65
FAM3A-208ENST00000419205 SUCLG2Q96I99 432 aa25.33■■□□□ 1.65
FAM3A-208ENST00000419205 USP16Q9Y5T5 823 aa25.33■■□□□ 1.65
FAM3A-208ENST00000419205 UNC5CLQ8IV45 518 aa25.32■■□□□ 1.64
FAM3A-208ENST00000419205 KAZALD1Q96I82 304 aa25.32■■□□□ 1.64
FAM3A-208ENST00000419205 TTC41PQ6P2S7 1318 aa25.32■■□□□ 1.64
FAM3A-208ENST00000419205 NEURL1BA8MQ27 555 aa25.31■■□□□ 1.64
FAM3A-208ENST00000419205 HSP90AA1P07900 732 aaKnown RBP25.31■■□□□ 1.64
FAM3A-208ENST00000419205 NKX1-1Q15270 411 aaPredicted RBP25.31■■□□□ 1.64
FAM3A-208ENST00000419205 AFDNP55196 1824 aaKnown RBP25.31■■□□□ 1.64
FAM3A-208ENST00000419205 ERVV-2B6SEH9 535 aa25.31■■□□□ 1.64
FAM3A-208ENST00000419205 OS9Q13438 667 aaPredicted RBP25.31■■□□□ 1.64
FAM3A-208ENST00000419205 ERBB4Q15303 1308 aa25.31■■□□□ 1.64
FAM3A-208ENST00000419205 ST18O60284 1047 aa25.3■■□□□ 1.64
FAM3A-208ENST00000419205 IL2RBP14784 551 aa25.29■■□□□ 1.64
FAM3A-208ENST00000419205 GCKRQ14397 625 aa25.29■■□□□ 1.64
FAM3A-208ENST00000419205 ANKRD13DQ6ZTN6 518 aa25.29■■□□□ 1.64
FAM3A-208ENST00000419205 CLASRPQ8N2M8 674 aaKnown RBP25.29■■□□□ 1.64
FAM3A-208ENST00000419205 BICC1Q9H694 974 aaKnown RBP25.29■■□□□ 1.64
FAM3A-208ENST00000419205 RAB3GAP1Q15042 981 aa25.28■■□□□ 1.64
FAM3A-208ENST00000419205 IL17RAQ96F46 866 aa25.28■■□□□ 1.64
FAM3A-208ENST00000419205 MCCP23508 829 aa25.28■■□□□ 1.64
FAM3A-208ENST00000419205 COL15A1P39059 1388 aa25.28■■□□□ 1.64
FAM3A-208ENST00000419205 KCPQ6ZWJ8 1503 aa25.27■■□□□ 1.64
FAM3A-208ENST00000419205 ANAPC15P60006 121 aa25.27■■□□□ 1.64
FAM3A-208ENST00000419205 MYD88Q99836 296 aa25.27■■□□□ 1.64
FAM3A-208ENST00000419205 GLRX3O76003 335 aaKnown RBP25.26■■□□□ 1.63
FAM3A-208ENST00000419205 CNTROBQ8N137 903 aa25.26■■□□□ 1.63
FAM3A-208ENST00000419205 PA2G4Q9UQ80 394 aaKnown RBP25.25■■□□□ 1.63
FAM3A-208ENST00000419205 DDX11L8A8MPP1 907 aa25.24■■□□□ 1.63
FAM3A-208ENST00000419205 GPATCH3Q96I76 525 aa25.24■■□□□ 1.63
FAM3A-208ENST00000419205 ANO2Q9NQ90 1003 aa25.24■■□□□ 1.63
FAM3A-208ENST00000419205 TNPO1Q92973 898 aaKnown RBP25.23■■□□□ 1.63
FAM3A-208ENST00000419205 ECHDC1Q9NTX5 307 aa25.23■■□□□ 1.63
FAM3A-208ENST00000419205 TNS2Q63HR2 1409 aa25.23■■□□□ 1.63
FAM3A-208ENST00000419205 NUP188Q5SRE5 1749 aa25.23■■□□□ 1.63
FAM3A-208ENST00000419205 PLBD2Q8NHP8 589 aa25.23■■□□□ 1.63
FAM3A-208ENST00000419205 G3BP1Q13283 466 aaKnown RBP eCLIP25.22■■□□□ 1.63
FAM3A-208ENST00000419205 IL27Q8NEV9 243 aa25.22■■□□□ 1.63
FAM3A-208ENST00000419205 TOGARAM1Q9Y4F4 1720 aa25.21■■□□□ 1.63
FAM3A-208ENST00000419205 FOXD4L1Q9NU39 408 aa25.21■■□□□ 1.63
FAM3A-208ENST00000419205 SASH1O94885 1247 aa25.21■■□□□ 1.63
FAM3A-208ENST00000419205 IFIT2P09913 472 aaKnown RBP25.21■■□□□ 1.63
FAM3A-208ENST00000419205 EVA1CP58658 441 aa25.21■■□□□ 1.63
FAM3A-208ENST00000419205 GBP4Q96PP9 640 aa25.21■■□□□ 1.63
FAM3A-208ENST00000419205 SGSM2O43147 1006 aa25.2■■□□□ 1.62
FAM3A-208ENST00000419205 MAP4K4O95819 1239 aaPredicted RBP25.2■■□□□ 1.62
FAM3A-208ENST00000419205 PIP4K2AP48426 406 aaPredicted RBP25.2■■□□□ 1.62
FAM3A-208ENST00000419205 MCM2P49736 904 aa25.2■■□□□ 1.62
FAM3A-208ENST00000419205 STRN4Q9NRL3 753 aa25.2■■□□□ 1.62
FAM3A-208ENST00000419205 NBPF26B4DH59 902 aa25.18■■□□□ 1.62
FAM3A-208ENST00000419205 NBPF14Q5TI25 921 aa25.18■■□□□ 1.62
FAM3A-208ENST00000419205 NBPF10Q6P3W6 841 aaKnown RBP25.18■■□□□ 1.62
FAM3A-208ENST00000419205 AACSQ86V21 672 aa25.18■■□□□ 1.62
FAM3A-208ENST00000419205 NBPF15Q8N660 670 aa25.18■■□□□ 1.62
FAM3A-208ENST00000419205 IL25Q9H293 177 aa25.18■■□□□ 1.62
FAM3A-208ENST00000419205 CWC22Q9HCG8 908 aaKnown RBP25.18■■□□□ 1.62
FAM3A-208ENST00000419205 RABL6Q3YEC7 729 aaPredicted RBP25.18■■□□□ 1.62
FAM3A-208ENST00000419205 EPHA10Q5JZY3 1008 aa25.18■■□□□ 1.62
FAM3A-208ENST00000419205 CLEC17AQ6ZS10 378 aa25.18■■□□□ 1.62
FAM3A-208ENST00000419205 PALD1Q9ULE6 856 aa25.18■■□□□ 1.62
FAM3A-208ENST00000419205 HSPA4P34932 840 aa25.17■■□□□ 1.62
FAM3A-208ENST00000419205 COL14A1Q05707 1796 aaKnown RBP25.17■■□□□ 1.62
FAM3A-208ENST00000419205 RAD50Q92878 1312 aa25.17■■□□□ 1.62
FAM3A-208ENST00000419205 NEK4P51957 841 aa25.16■■□□□ 1.62
FAM3A-208ENST00000419205 COPRSQ9NQ92 184 aa25.16■■□□□ 1.62
FAM3A-208ENST00000419205 PTMSP20962 102 aa25.16■■□□□ 1.62
FAM3A-208ENST00000419205 DDX54Q8TDD1 881 aaKnown RBP25.16■■□□□ 1.62
FAM3A-208ENST00000419205 CASP7P55210 303 aa25.15■■□□□ 1.62
FAM3A-208ENST00000419205 NUCB2P80303 420 aa25.15■■□□□ 1.62
FAM3A-208ENST00000419205 EAF2Q96CJ1 260 aaPredicted RBP25.15■■□□□ 1.62
FAM3A-208ENST00000419205 TJP1Q07157 1748 aa25.14■■□□□ 1.62
FAM3A-208ENST00000419205 TRAK2O60296 914 aa25.14■■□□□ 1.62
FAM3A-208ENST00000419205 RFX5P48382 616 aaPredicted RBP25.14■■□□□ 1.62
FAM3A-208ENST00000419205 EVI5LQ96CN4 794 aa25.14■■□□□ 1.62
FAM3A-208ENST00000419205 COL22A1Q8NFW1 1626 aaPredicted RBP25.14■■□□□ 1.61
FAM3A-208ENST00000419205 UBE3BQ7Z3V4 1068 aa25.13■■□□□ 1.61
FAM3A-208ENST00000419205 RUFY2Q8WXA3 655 aa25.13■■□□□ 1.61
FAM3A-208ENST00000419205 LSG1Q9H089 658 aaKnown RBP25.13■■□□□ 1.61
FAM3A-208ENST00000419205 A0A087WZG4 1122 aa25.13■■□□□ 1.61
FAM3A-208ENST00000419205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.13■■□□□ 1.61
FAM3A-208ENST00000419205 PLCH1Q4KWH8 1693 aa25.12■■□□□ 1.61
FAM3A-208ENST00000419205 CYP2E1P05181 493 aaPredicted RBP25.12■■□□□ 1.61
FAM3A-208ENST00000419205 SSFA2P28290 1259 aa25.12■■□□□ 1.61
FAM3A-208ENST00000419205 DIAPH3Q9NSV4 1193 aa25.12■■□□□ 1.61
FAM3A-208ENST00000419205 AHDC1Q5TGY3 1603 aaPredicted RBP25.11■■□□□ 1.61
FAM3A-208ENST00000419205 ATP5J2-PTCD1G3V325 749 aa25.11■■□□□ 1.61
FAM3A-208ENST00000419205 PTCD1O75127 700 aaKnown RBP25.11■■□□□ 1.61
FAM3A-208ENST00000419205 SIL1Q9H173 461 aa25.11■■□□□ 1.61
FAM3A-208ENST00000419205 H7C1W4 665 aa25.1■■□□□ 1.61
FAM3A-208ENST00000419205 ROBO1Q9Y6N7 1651 aa25.1■■□□□ 1.61
FAM3A-208ENST00000419205 PTPN12Q05209 780 aaKnown RBP25.1■■□□□ 1.61
FAM3A-208ENST00000419205 CWC27Q6UX04 472 aaKnown RBP25.1■■□□□ 1.61
FAM3A-208ENST00000419205 KIAA1211Q6ZU35 1233 aa25.1■■□□□ 1.61
FAM3A-208ENST00000419205 KLHDC4Q8TBB5 520 aa25.1■■□□□ 1.61
FAM3A-208ENST00000419205 TMX3Q96JJ7 454 aa25.1■■□□□ 1.61
FAM3A-208ENST00000419205 DISP2A7MBM2 1401 aa25.1■■□□□ 1.61
FAM3A-208ENST00000419205 ITGB4P16144 1822 aa25.09■■□□□ 1.61
FAM3A-208ENST00000419205 A1BGP04217 495 aa25.09■■□□□ 1.61
FAM3A-208ENST00000419205 CUL4AQ13619 759 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms