RNA–Protein interactions for RNA: ENST00000419021.1

SEC61A2-208, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5

Gene SEC61A2, Length 778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-208ENST00000419021 RFC4P35249 363 aa12.97□□□□□ -0.33
SEC61A2-208ENST00000419021 USPL1Q5W0Q7 1092 aa12.97□□□□□ -0.33
SEC61A2-208ENST00000419021 DZIP3Q86Y13 1208 aaKnown RBP12.97□□□□□ -0.33
SEC61A2-208ENST00000419021 XAGE3Q8WTP9 111 aa12.97□□□□□ -0.33
SEC61A2-208ENST00000419021 PHAXQ9H814 394 aaKnown RBP12.97□□□□□ -0.33
SEC61A2-208ENST00000419021 HYPKQ9NX55 129 aa12.97□□□□□ -0.33
SEC61A2-208ENST00000419021 ADCY9O60503 1353 aa12.96□□□□□ -0.33
SEC61A2-208ENST00000419021 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.33
SEC61A2-208ENST00000419021 TM4SF1P30408 202 aa12.96□□□□□ -0.33
SEC61A2-208ENST00000419021 DDR1Q08345 913 aa12.96□□□□□ -0.33
SEC61A2-208ENST00000419021 HLFQ16534 295 aa12.96□□□□□ -0.33
SEC61A2-208ENST00000419021 COPS6Q7L5N1 327 aa12.96□□□□□ -0.33
SEC61A2-208ENST00000419021 SSH1Q8WYL5 1049 aa12.96□□□□□ -0.33
SEC61A2-208ENST00000419021 ZNF428Q96B54 188 aa12.96□□□□□ -0.33
SEC61A2-208ENST00000419021 BRPF1P55201 1214 aaPredicted RBP12.95□□□□□ -0.34
SEC61A2-208ENST00000419021 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
SEC61A2-208ENST00000419021 MRPL50Q8N5N7 158 aaKnown RBP12.95□□□□□ -0.34
SEC61A2-208ENST00000419021 SLC4A2P04920 1241 aa12.94□□□□□ -0.34
SEC61A2-208ENST00000419021 RARSP54136 660 aaKnown RBP12.94□□□□□ -0.34
SEC61A2-208ENST00000419021 NFIXQ14938 502 aa12.94□□□□□ -0.34
SEC61A2-208ENST00000419021 ALDH1L2Q3SY69 923 aa12.94□□□□□ -0.34
SEC61A2-208ENST00000419021 CLEC4GQ6UXB4 293 aa12.94□□□□□ -0.34
SEC61A2-208ENST00000419021 CHMP4AQ9BY43 222 aa12.94□□□□□ -0.34
SEC61A2-208ENST00000419021 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
SEC61A2-208ENST00000419021 BRCA1P38398 1863 aaKnown RBP12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 UBN2Q6ZU65 1347 aa12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 ZPR1O75312 459 aa12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 FLIIQ13045 1269 aa12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 GIGYF2Q6Y7W6 1299 aaKnown RBP12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 PLBD2Q8NHP8 589 aa12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 ZBTB3Q9H5J0 574 aa12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 LAMB2P55268 1798 aa12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 TNRC6CQ9HCJ0 1690 aaKnown RBP12.93□□□□□ -0.34
SEC61A2-208ENST00000419021 DLEC1Q9Y238 1755 aa12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 MSH5O43196 834 aa12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 MMP10P09238 476 aa12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 C10orf71Q711Q0 1435 aa12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 DDX60Q8IY21 1712 aaKnown RBP12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 YTHDC1Q96MU7 727 aaKnown RBP12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 STK31Q9BXU1 1019 aa12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 SPON1Q9HCB6 807 aa12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 IBTKQ9P2D0 1353 aaPredicted RBP12.92□□□□□ -0.34
SEC61A2-208ENST00000419021 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
SEC61A2-208ENST00000419021 KIF6Q6ZMV9 814 aa12.91□□□□□ -0.34
SEC61A2-208ENST00000419021 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
SEC61A2-208ENST00000419021 ISCA1Q9BUE6 129 aa12.91□□□□□ -0.34
SEC61A2-208ENST00000419021 KSR2Q6VAB6 950 aa12.9□□□□□ -0.34
SEC61A2-208ENST00000419021 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
SEC61A2-208ENST00000419021 CARMIL3Q8ND23 1372 aa12.9□□□□□ -0.34
SEC61A2-208ENST00000419021 PXDNLA1KZ92 1463 aa12.9□□□□□ -0.34
SEC61A2-208ENST00000419021 PI4KAP2A4QPH2 592 aa12.89□□□□□ -0.35
SEC61A2-208ENST00000419021 TRIM28Q13263 835 aaKnown RBP12.89□□□□□ -0.35
SEC61A2-208ENST00000419021 TCIRG1Q13488 830 aa12.89□□□□□ -0.35
SEC61A2-208ENST00000419021 PI4KAP1Q8N8J0 262 aa12.89□□□□□ -0.35
SEC61A2-208ENST00000419021 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 BCAR3O75815 825 aa12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 METTL22Q9BUU2 404 aaPredicted RBP12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 ZNF652Q9Y2D9 606 aa12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 GOLGB1Q14789 3259 aaKnown RBP12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 MYH3P11055 1940 aa12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 PTPRCP08575 1304 aa12.88□□□□□ -0.35
SEC61A2-208ENST00000419021 ABCC12Q96J65 1359 aa12.87□□□□□ -0.35
SEC61A2-208ENST00000419021 F6X3S4 739 aa12.87□□□□□ -0.35
SEC61A2-208ENST00000419021 NTSR2O95665 410 aa12.87□□□□□ -0.35
SEC61A2-208ENST00000419021 NPM2Q86SE8 214 aaKnown RBP12.87□□□□□ -0.35
SEC61A2-208ENST00000419021 NLRP10Q86W26 655 aa12.87□□□□□ -0.35
SEC61A2-208ENST00000419021 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEC61A2-208ENST00000419021 SERPINB2P05120 415 aa12.86□□□□□ -0.35
SEC61A2-208ENST00000419021 GPTP24298 496 aa12.86□□□□□ -0.35
SEC61A2-208ENST00000419021 FKBP5Q13451 457 aaPredicted RBP12.86□□□□□ -0.35
SEC61A2-208ENST00000419021 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
SEC61A2-208ENST00000419021 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
SEC61A2-208ENST00000419021 BICDL1Q6ZP65 573 aa12.86□□□□□ -0.35
SEC61A2-208ENST00000419021 DNAAF4Q8WXU2 420 aa12.86□□□□□ -0.35
SEC61A2-208ENST00000419021 ARXQ96QS3 562 aa12.86□□□□□ -0.35
SEC61A2-208ENST00000419021 DDX58O95786 925 aaKnown RBP12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 POLD1P28340 1107 aa12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 RIC3Q7Z5B4 369 aa12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 SETDB2Q96T68 719 aa12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 NOB1Q9ULX3 412 aaKnown RBP12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 TNNQ9UQP3 1299 aa12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 ABCC4O15439 1325 aa12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
SEC61A2-208ENST00000419021 COL4A1P02462 1669 aa12.84□□□□□ -0.35
SEC61A2-208ENST00000419021 NEURL1BA8MQ27 555 aa12.84□□□□□ -0.35
SEC61A2-208ENST00000419021 ATP5J2-PTCD1G3V325 749 aa12.84□□□□□ -0.35
SEC61A2-208ENST00000419021 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
SEC61A2-208ENST00000419021 ARHGAP45Q92619 1136 aa12.84□□□□□ -0.35
SEC61A2-208ENST00000419021 MYD88Q99836 296 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms