RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 NBPF6Q5VWK0 638 aa13.53□□□□□ -0.24
DSP-202ENST00000418664 NBPF4Q96M43 638 aa13.53□□□□□ -0.24
DSP-202ENST00000418664 GBP5Q96PP8 586 aa13.53□□□□□ -0.24
DSP-202ENST00000418664 HSPA1LP34931 641 aa13.53□□□□□ -0.24
DSP-202ENST00000418664 ATP2B3Q16720 1220 aa13.53□□□□□ -0.24
DSP-202ENST00000418664 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
DSP-202ENST00000418664 ARHGEF2Q92974 986 aaKnown RBP13.53□□□□□ -0.24
DSP-202ENST00000418664 GIMAP4Q9NUV9 329 aa13.53□□□□□ -0.24
DSP-202ENST00000418664 PSPC1Q8WXF1 523 aaKnown RBP13.53□□□□□ -0.24
DSP-202ENST00000418664 STMN4Q9H169 189 aaPredicted RBP13.53□□□□□ -0.24
DSP-202ENST00000418664 CACYBPQ9HB71 228 aaKnown RBP13.53□□□□□ -0.24
DSP-202ENST00000418664 DDX41Q9UJV9 622 aaKnown RBP13.53□□□□□ -0.24
DSP-202ENST00000418664 CCDC50Q8IVM0 306 aa13.52□□□□□ -0.24
DSP-202ENST00000418664 DPH6Q7L8W6 267 aa13.52□□□□□ -0.24
DSP-202ENST00000418664 LARP1BQ659C4 914 aaKnown RBP13.52□□□□□ -0.25
DSP-202ENST00000418664 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
DSP-202ENST00000418664 FGFR1OPO95684 399 aaKnown RBP13.52□□□□□ -0.25
DSP-202ENST00000418664 INTS8Q75QN2 995 aaKnown RBP13.52□□□□□ -0.25
DSP-202ENST00000418664 GNL3LQ9NVN8 582 aaKnown RBP13.52□□□□□ -0.25
DSP-202ENST00000418664 GJC2Q5T442 439 aaPredicted RBP13.52□□□□□ -0.25
DSP-202ENST00000418664 CCDC129Q6ZRS4 1044 aa13.52□□□□□ -0.25
DSP-202ENST00000418664 CCDC125Q86Z20 511 aa13.52□□□□□ -0.25
DSP-202ENST00000418664 FMNL3Q8IVF7 1028 aa13.52□□□□□ -0.25
DSP-202ENST00000418664 SFMBT1Q9UHJ3 866 aa13.52□□□□□ -0.25
DSP-202ENST00000418664 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
DSP-202ENST00000418664 SDCCAG8Q86SQ7 713 aaPredicted RBP13.51□□□□□ -0.25
DSP-202ENST00000418664 MRFAP1Q9Y605 127 aa13.51□□□□□ -0.25
DSP-202ENST00000418664 WDR46O15213 610 aaKnown RBP13.51□□□□□ -0.25
DSP-202ENST00000418664 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
DSP-202ENST00000418664 TTC14Q96N46 770 aa13.51□□□□□ -0.25
DSP-202ENST00000418664 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
DSP-202ENST00000418664 RIOK3O14730 519 aaKnown RBP13.51□□□□□ -0.25
DSP-202ENST00000418664 KRBA2Q6ZNG9 492 aa13.51□□□□□ -0.25
DSP-202ENST00000418664 RAB3IPQ96QF0 476 aaPredicted RBP13.51□□□□□ -0.25
DSP-202ENST00000418664 SAMD15Q9P1V8 674 aa13.51□□□□□ -0.25
DSP-202ENST00000418664 SERPINI2O75830 405 aa13.51□□□□□ -0.25
DSP-202ENST00000418664 RPAINQ86UA6 219 aa13.51□□□□□ -0.25
DSP-202ENST00000418664 PPP2R5CQ13362 524 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 MAP2K2P36507 400 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 PROCA1Q8NCQ7 364 aaPredicted RBP13.5□□□□□ -0.25
DSP-202ENST00000418664 NCAPGQ9BPX3 1015 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 OPHN1O60890 802 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 COG3Q96JB2 828 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 PRPHP41219 470 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 TRIM68Q6AZZ1 485 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 BICD1Q96G01 975 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 YEATS4O95619 227 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 KRT13P13646 458 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 MAP3K11Q16584 847 aa13.5□□□□□ -0.25
DSP-202ENST00000418664 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
DSP-202ENST00000418664 SNW1Q13573 536 aaKnown RBP13.49□□□□□ -0.25
DSP-202ENST00000418664 CCDC12Q8WUD4 166 aaPredicted RBP13.49□□□□□ -0.25
DSP-202ENST00000418664 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
DSP-202ENST00000418664 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.49□□□□□ -0.25
DSP-202ENST00000418664 PALM3A6NDB9 673 aaPredicted RBP13.49□□□□□ -0.25
DSP-202ENST00000418664 PSME1Q06323 249 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 SMARCC2Q8TAQ2 1214 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 FRMD3A2A2Y4 597 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 TSNAXIP1Q2TAA8 658 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 UTP14CQ5TAP6 766 aaKnown RBP13.49□□□□□ -0.25
DSP-202ENST00000418664 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
DSP-202ENST00000418664 CETN3O15182 167 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 GJC1P36383 396 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 ZNF131P52739 623 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 TAF12Q16514 161 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 FOSL2P15408 326 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 TMED1Q13445 227 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 USP6NLQ92738 828 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 SATB2Q9UPW6 733 aa13.49□□□□□ -0.25
DSP-202ENST00000418664 DDX12PQ92771 950 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 MPHOSPH6Q99547 160 aaKnown RBP13.48□□□□□ -0.25
DSP-202ENST00000418664 CCDC14Q49A88 953 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
DSP-202ENST00000418664 PPARDQ03181 441 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.48□□□□□ -0.254e-9■□□□□ 9.7
DSP-202ENST00000418664 PALMDQ9NP74 551 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 CCDC196A0A1B0GTZ2 297 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 TMEM110-MUSTN1A8MSY1 372 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 CCDC38Q502W7 563 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 NOP9Q86U38 636 aaKnown RBP13.48□□□□□ -0.25
DSP-202ENST00000418664 CCDC65Q8IXS2 484 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
DSP-202ENST00000418664 FCHSD2O94868 740 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 FOXD1Q16676 465 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 TXNDC16Q9P2K2 825 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 LONP1P36776 959 aaKnown RBP13.48□□□□□ -0.25
DSP-202ENST00000418664 TCERG1LQ5VWI1 586 aa13.48□□□□□ -0.25
DSP-202ENST00000418664 ROCK1Q13464 1354 aa13.47□□□□□ -0.25
DSP-202ENST00000418664 PHACTR2O75167 634 aa13.47□□□□□ -0.25
DSP-202ENST00000418664 ATP2A2P16615 1042 aaKnown RBP13.47□□□□□ -0.25
DSP-202ENST00000418664 MICAL1Q8TDZ2 1067 aa13.47□□□□□ -0.25
DSP-202ENST00000418664 SPAG5Q96R06 1193 aa13.47□□□□□ -0.25
DSP-202ENST00000418664 UBAC1Q9BSL1 405 aa13.47□□□□□ -0.25
DSP-202ENST00000418664 SEC63Q9UGP8 760 aaKnown RBP13.47□□□□□ -0.25
DSP-202ENST00000418664 ZNF280CQ8ND82 737 aa13.47□□□□□ -0.25
DSP-202ENST00000418664 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
DSP-202ENST00000418664 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
DSP-202ENST00000418664 RINLQ6ZS11 566 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms