RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 DAPK1P53355 1430 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 CETN3O15182 167 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 FOSBP53539 338 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 UBE2HP62256 183 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 MXRA7P84157 204 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 CEBPZQ03701 1054 aaKnown RBP11.86□□□□□ -0.51
SATB1-204ENST00000417717 TMC6Q7Z403 805 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
SATB1-204ENST00000417717 GBP7Q8N8V2 638 aaPredicted RBP11.86□□□□□ -0.51
SATB1-204ENST00000417717 CNTROBQ8N137 903 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 STMN4Q9H169 189 aaPredicted RBP11.86□□□□□ -0.51
SATB1-204ENST00000417717 SATB2Q9UPW6 733 aa11.86□□□□□ -0.51
SATB1-204ENST00000417717 RRP15Q9Y3B9 282 aaKnown RBP11.86□□□□□ -0.51
SATB1-204ENST00000417717 ANKRD50Q9ULJ7 1429 aa11.85□□□□□ -0.51
SATB1-204ENST00000417717 CDK13Q14004 1512 aaKnown RBP11.85□□□□□ -0.51
SATB1-204ENST00000417717 PPFIA2O75334 1257 aa11.85□□□□□ -0.51
SATB1-204ENST00000417717 MIER3Q7Z3K6 550 aa11.85□□□□□ -0.51
SATB1-204ENST00000417717 RALYLQ86SE5 291 aaKnown RBP11.85□□□□□ -0.51
SATB1-204ENST00000417717 TBC1D32Q96NH3 1257 aa11.85□□□□□ -0.51
SATB1-204ENST00000417717 SH3GL3Q99963 347 aa11.85□□□□□ -0.51
SATB1-204ENST00000417717 IRX1P78414 480 aaPredicted RBP11.85□□□□□ -0.51
SATB1-204ENST00000417717 CAMK4Q16566 473 aa11.85□□□□□ -0.51
SATB1-204ENST00000417717 STX1AQ16623 288 aa11.85□□□□□ -0.51
SATB1-204ENST00000417717 TACO1Q9BSH4 297 aaKnown RBP11.85□□□□□ -0.51
SATB1-204ENST00000417717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.85□□□□□ -0.51
SATB1-204ENST00000417717 SRGAP3O43295 1099 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 NAIPQ13075 1403 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 CCDC155Q8N6L0 562 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 SMIM24O75264 130 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 ALS2CR12Q96Q35 445 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 TRIM7Q9C029 511 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 HIP1O00291 1037 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 AIMP1Q12904 312 aaKnown RBP11.84□□□□□ -0.51
SATB1-204ENST00000417717 CCDC65Q8IXS2 484 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
SATB1-204ENST00000417717 A0A087WUV0 522 aaPredicted RBP11.84□□□□□ -0.51
SATB1-204ENST00000417717 OAS2P29728 719 aaKnown RBP11.84□□□□□ -0.51
SATB1-204ENST00000417717 ANAPC15P60006 121 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 SMC6Q96SB8 1091 aa11.84□□□□□ -0.51
SATB1-204ENST00000417717 MAP7D1Q3KQU3 841 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 NBPF6Q5VWK0 638 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 MMS22LQ6ZRQ5 1243 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 CCDC129Q6ZRS4 1044 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 NBPF5PQ86XG9 351 aaPredicted RBP11.83□□□□□ -0.52
SATB1-204ENST00000417717 PDCD7Q8N8D1 485 aaKnown RBP11.83□□□□□ -0.52
SATB1-204ENST00000417717 STMN2Q93045 179 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 NBPF4Q96M43 638 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 PANK3Q9H999 370 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 MRFAP1Q9Y605 127 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
SATB1-204ENST00000417717 LOC102724159A0A0B4J2E5 919 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 FAM177BA6PVY3 158 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
SATB1-204ENST00000417717 SETDB1Q15047 1291 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
SATB1-204ENST00000417717 NFXL1Q6ZNB6 911 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 SAAL1Q96ER3 474 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 YEATS4O95619 227 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 DESP17661 470 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 EVCP57679 992 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 CAPN7Q9Y6W3 813 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 KIF14Q15058 1648 aa11.83□□□□□ -0.52
SATB1-204ENST00000417717 E2F4Q16254 413 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 PDE1CQ14123 709 aaPredicted RBP11.82□□□□□ -0.52
SATB1-204ENST00000417717 DIXDC1Q155Q3 683 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 CCDC30Q5VVM6 783 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 ARMC2Q8NEN0 867 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 LARSQ9P2J5 1176 aaKnown RBP11.82□□□□□ -0.52
SATB1-204ENST00000417717 BAIAP2L1Q9UHR4 511 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 CASQ2O14958 399 aaPredicted RBP11.82□□□□□ -0.52
SATB1-204ENST00000417717 HDAC1Q13547 482 aaPredicted RBP11.82□□□□□ -0.52
SATB1-204ENST00000417717 TUBB2AQ13885 445 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 RAB3IL1Q8TBN0 382 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 CABS1Q96KC9 395 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 TUBB2BQ9BVA1 445 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
SATB1-204ENST00000417717 PLB1Q6P1J6 1458 aa11.82□□□□□ -0.52
SATB1-204ENST00000417717 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
SATB1-204ENST00000417717 PPP2R3AQ06190 1150 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 PNMA8AQ86V59 439 aaPredicted RBP11.81□□□□□ -0.52
SATB1-204ENST00000417717 GEMIN8Q9NWZ8 242 aaKnown RBP11.81□□□□□ -0.52
SATB1-204ENST00000417717 GSTTP1A0A1W2PQM5 241 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 ERICH2A1L162 156 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 FSD2A1L4K1 749 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
SATB1-204ENST00000417717 CACNA2D4Q7Z3S7 1137 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 NBPF3Q9H094 633 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 VPS53Q5VIR6 699 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 CCDC110Q8TBZ0 833 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 CREB3O43889 395 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 RUNDC1Q96C34 613 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 YY1AP1Q9H869 796 aa11.81□□□□□ -0.52
SATB1-204ENST00000417717 C9orf84Q5VXU9 1444 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 NUP153P49790 1475 aaKnown RBP11.8□□□□□ -0.52
SATB1-204ENST00000417717 A0A0G2JS52 829 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 PHLDB2Q86SQ0 1253 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 RAB11FIP4Q86YS3 637 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 NEK11Q8NG66 645 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms