RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ST18O60284 1047 aa8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 VARS2Q5ST30 1063 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 LRRC4BQ9NT99 713 aa8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 MKRN1Q9UHC7 482 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 AXIN2Q9Y2T1 843 aa8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 TUBGCP6Q96RT7 1819 aa8.12□□□□□ -1.11
ECHDC1-206ENST00000417628 TRPM1Q7Z4N2 1603 aa8.11□□□□□ -1.11
ECHDC1-206ENST00000417628 ERBB3P21860 1342 aa8.11□□□□□ -1.11
ECHDC1-206ENST00000417628 DLL1O00548 723 aa8.11□□□□□ -1.11
ECHDC1-206ENST00000417628 HSPA8P11142 646 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-206ENST00000417628 MSL1Q68DK7 614 aa8.11□□□□□ -1.11
ECHDC1-206ENST00000417628 FAM163AQ96GL9 167 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-206ENST00000417628 STK26Q9P289 416 aa8.11□□□□□ -1.11
ECHDC1-206ENST00000417628 CPDO75976 1380 aa8.1□□□□□ -1.11
ECHDC1-206ENST00000417628 WNK3Q9BYP7 1800 aa8.1□□□□□ -1.11
ECHDC1-206ENST00000417628 HOXA2O43364 376 aa8.1□□□□□ -1.11
ECHDC1-206ENST00000417628 RAD21O60216 631 aa8.1□□□□□ -1.11
ECHDC1-206ENST00000417628 RRAGCQ9HB90 399 aa8.1□□□□□ -1.11
ECHDC1-206ENST00000417628 PIK3C2AO00443 1686 aa8.1□□□□□ -1.11
ECHDC1-206ENST00000417628 CNTNAP1P78357 1384 aa8.1□□□□□ -1.11
ECHDC1-206ENST00000417628 ABCC11Q96J66 1382 aa8.1□□□□□ -1.11
ECHDC1-206ENST00000417628 CENPBP07199 599 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 USP46P62068 366 aa8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 SLC27A3Q5K4L6 730 aa8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 CCDC82Q8N4S0 544 aa8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 GCC1Q96CN9 775 aa8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 HIRIP3Q9BW71 556 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 CDCA7Q9BWT1 371 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 WBP1LQ9NX94 342 aa8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 PCDHGC3Q9UN70 934 aa8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 VPS9D1Q9Y2B5 631 aa8.09□□□□□ -1.11
ECHDC1-206ENST00000417628 EMP3P54852 163 aa8.08□□□□□ -1.12
ECHDC1-206ENST00000417628 HLA-CQ95604 372 aa8.08□□□□□ -1.12
ECHDC1-206ENST00000417628 MARVELD3Q96A59 401 aa8.08□□□□□ -1.12
ECHDC1-206ENST00000417628 PKD1L3Q7Z443 1732 aa8.08□□□□□ -1.12
ECHDC1-206ENST00000417628 USP6P35125 1406 aa8.07□□□□□ -1.12
ECHDC1-206ENST00000417628 AP1G2O75843 785 aa8.07□□□□□ -1.12
ECHDC1-206ENST00000417628 FDX1P10109 184 aa8.07□□□□□ -1.12
ECHDC1-206ENST00000417628 GUCA2AQ02747 115 aa8.07□□□□□ -1.12
ECHDC1-206ENST00000417628 C9orf131Q5VYM1 1079 aa8.07□□□□□ -1.12
ECHDC1-206ENST00000417628 BTAF1O14981 1849 aa8.06□□□□□ -1.12
ECHDC1-206ENST00000417628 PBX2P40425 430 aa8.06□□□□□ -1.12
ECHDC1-206ENST00000417628 ACSBG1Q96GR2 724 aa8.06□□□□□ -1.12
ECHDC1-206ENST00000417628 GDPD2Q9HCC8 539 aa8.06□□□□□ -1.12
ECHDC1-206ENST00000417628 ARHGAP27Q6ZUM4 889 aa8.05□□□□□ -1.12
ECHDC1-206ENST00000417628 TOM1L2Q6ZVM7 507 aa8.05□□□□□ -1.12
ECHDC1-206ENST00000417628 SAMD7Q7Z3H4 446 aa8.05□□□□□ -1.12
ECHDC1-206ENST00000417628 COL23A1Q86Y22 540 aaPredicted RBP8.05□□□□□ -1.12
ECHDC1-206ENST00000417628 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
ECHDC1-206ENST00000417628 ZBTB3Q9H5J0 574 aa8.05□□□□□ -1.12
ECHDC1-206ENST00000417628 RPGRIP1LQ68CZ1 1315 aa8.04□□□□□ -1.12
ECHDC1-206ENST00000417628 PITPNM2Q9BZ72 1349 aa8.04□□□□□ -1.12
ECHDC1-206ENST00000417628 KIF1BO60333 1816 aa8.04□□□□□ -1.12
ECHDC1-206ENST00000417628 BHMG1C9JSJ3 638 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-206ENST00000417628 TNRC18O15417 2968 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-206ENST00000417628 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
ECHDC1-206ENST00000417628 LCE2DQ5TA82 110 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-206ENST00000417628 ABCC6O95255 1503 aa8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 NUP155O75694 1391 aa8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 EIF3AQ14152 1382 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 POTEB3A0JP26 581 aa8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 HABP4Q5JVS0 413 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 NUTM2GQ5VZR2 741 aa8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 POTEBQ6S5H4 581 aa8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 LAPTM4BQ86VI4 370 aa8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 NGDNQ8NEJ9 315 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 BCS1LQ9Y276 419 aa8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 ZNF330Q9Y3S2 320 aaPredicted RBP8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 PDE4DIPQ5VU43 2346 aa8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 YTHDC2Q9H6S0 1430 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-206ENST00000417628 PPLO60437 1756 aa8.02□□□□□ -1.13
ECHDC1-206ENST00000417628 FAM205CA6NFA0 338 aa8.02□□□□□ -1.13
ECHDC1-206ENST00000417628 EXOC5O00471 708 aa8.02□□□□□ -1.13
ECHDC1-206ENST00000417628 VEGFBP49765 207 aa8.02□□□□□ -1.13
ECHDC1-206ENST00000417628 FUT2Q10981 343 aa8.02□□□□□ -1.13
ECHDC1-206ENST00000417628 SLF2Q8IX21 1173 aa8.02□□□□□ -1.13
ECHDC1-206ENST00000417628 MCOLN1Q9GZU1 580 aa8.02□□□□□ -1.13
ECHDC1-206ENST00000417628 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.13
ECHDC1-206ENST00000417628 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
ECHDC1-206ENST00000417628 CFHP08603 1231 aa8.01□□□□□ -1.13
ECHDC1-206ENST00000417628 VEGFAP15692 232 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-206ENST00000417628 MAP2K1Q02750 393 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-206ENST00000417628 CTDSPL2Q05D32 466 aa8.01□□□□□ -1.13
ECHDC1-206ENST00000417628 SIRT1Q96EB6 747 aa8.01□□□□□ -1.13
ECHDC1-206ENST00000417628 RNF181Q9P0P0 153 aa8.01□□□□□ -1.13
ECHDC1-206ENST00000417628 CFAP99D6REC4 459 aa8□□□□□ -1.13
ECHDC1-206ENST00000417628 ABL2P42684 1182 aa8□□□□□ -1.13
ECHDC1-206ENST00000417628 KCNQ4P56696 695 aa8□□□□□ -1.13
ECHDC1-206ENST00000417628 MTMR2Q13614 643 aa8□□□□□ -1.13
ECHDC1-206ENST00000417628 HMX1Q9NP08 348 aaPredicted RBP8□□□□□ -1.13
ECHDC1-206ENST00000417628 VPS8Q8N3P4 1428 aa8□□□□□ -1.13
ECHDC1-206ENST00000417628 WDR17Q8IZU2 1322 aa8□□□□□ -1.13
ECHDC1-206ENST00000417628 COL18A1P39060 1754 aa7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 QRICH2Q9H0J4 1663 aa7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 VIRMAQ69YN4 1812 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 TK2O00142 265 aa7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 SOX10P56693 466 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms