RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 HSP90AB4PQ58FF6 505 aa17.44■□□□□ 0.38
HDAC9-208ENST00000417496 AACSQ86V21 672 aa17.44■□□□□ 0.38
HDAC9-208ENST00000417496 CCDC83Q8IWF9 413 aa17.44■□□□□ 0.38
HDAC9-208ENST00000417496 JAKMIP1Q96N16 626 aaKnown RBP17.44■□□□□ 0.38
HDAC9-208ENST00000417496 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
HDAC9-208ENST00000417496 OFD1O75665 1012 aa17.44■□□□□ 0.38
HDAC9-208ENST00000417496 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
HDAC9-208ENST00000417496 CCDC8Q9H0W5 538 aaPredicted RBP17.44■□□□□ 0.38
HDAC9-208ENST00000417496 SIL1Q9H173 461 aa17.44■□□□□ 0.38
HDAC9-208ENST00000417496 ECHDC1Q9NTX5 307 aa17.44■□□□□ 0.38
HDAC9-208ENST00000417496 HYPKQ9NX55 129 aa17.44■□□□□ 0.38
HDAC9-208ENST00000417496 STX6O43752 255 aa17.43■□□□□ 0.38
HDAC9-208ENST00000417496 ZSCAN22P10073 491 aaPredicted RBP17.43■□□□□ 0.38
HDAC9-208ENST00000417496 KSR2Q6VAB6 950 aa17.43■□□□□ 0.38
HDAC9-208ENST00000417496 KAZALD1Q96I82 304 aa17.43■□□□□ 0.38
HDAC9-208ENST00000417496 FAM227BQ96M60 508 aa17.43■□□□□ 0.38
HDAC9-208ENST00000417496 PXDNQ92626 1479 aa17.43■□□□□ 0.38
HDAC9-208ENST00000417496 FIBPO43427 364 aa17.43■□□□□ 0.38
HDAC9-208ENST00000417496 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
HDAC9-208ENST00000417496 SMC3Q9UQE7 1217 aa17.43■□□□□ 0.38
HDAC9-208ENST00000417496 HS1BP3Q53T59 392 aa17.42■□□□□ 0.38
HDAC9-208ENST00000417496 KCNH5Q8NCM2 988 aa17.42■□□□□ 0.38
HDAC9-208ENST00000417496 TLR7Q9NYK1 1049 aaKnown RBP17.42■□□□□ 0.38
HDAC9-208ENST00000417496 TTC41PQ6P2S7 1318 aa17.42■□□□□ 0.38
HDAC9-208ENST00000417496 EPB41L2O43491 1005 aaKnown RBP17.42■□□□□ 0.38
HDAC9-208ENST00000417496 SLC39A6Q13433 755 aa17.42■□□□□ 0.38
HDAC9-208ENST00000417496 MTX1Q13505 466 aa17.42■□□□□ 0.38
HDAC9-208ENST00000417496 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
HDAC9-208ENST00000417496 NECAB1Q8N987 351 aa17.42■□□□□ 0.38
HDAC9-208ENST00000417496 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
HDAC9-208ENST00000417496 EAF2Q96CJ1 260 aaPredicted RBP17.42■□□□□ 0.38
HDAC9-208ENST00000417496 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
HDAC9-208ENST00000417496 R3HCC1Q9Y3T6 440 aaKnown RBP17.42■□□□□ 0.38
HDAC9-208ENST00000417496 LTN1O94822 1766 aa17.41■□□□□ 0.38
HDAC9-208ENST00000417496 SASH1O94885 1247 aa17.41■□□□□ 0.38
HDAC9-208ENST00000417496 SYAP1Q96A49 352 aaPredicted RBP17.41■□□□□ 0.38
HDAC9-208ENST00000417496 TCEANC2Q96MN5 208 aa17.41■□□□□ 0.38
HDAC9-208ENST00000417496 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
HDAC9-208ENST00000417496 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
HDAC9-208ENST00000417496 ZKSCAN5Q9Y2L8 839 aa17.41■□□□□ 0.38
HDAC9-208ENST00000417496 USP42Q9H9J4 1324 aaKnown RBP17.4■□□□□ 0.38
HDAC9-208ENST00000417496 TCHHQ07283 1943 aa17.4■□□□□ 0.38
HDAC9-208ENST00000417496 NFAT5O94916 1531 aa17.4■□□□□ 0.38
HDAC9-208ENST00000417496 GJB2P29033 226 aa17.4■□□□□ 0.38
HDAC9-208ENST00000417496 ARHGEF25Q86VW2 580 aa17.4■□□□□ 0.38
HDAC9-208ENST00000417496 RGPD2P0DJD1 1756 aa17.4■□□□□ 0.38
HDAC9-208ENST00000417496 MYL6BP14649 208 aa17.4■□□□□ 0.38
HDAC9-208ENST00000417496 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
HDAC9-208ENST00000417496 BOLA2Q9H3K6 86 aa17.4■□□□□ 0.38
HDAC9-208ENST00000417496 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.4■□□□□ 0.38
HDAC9-208ENST00000417496 GRM8O00222 908 aa17.39■□□□□ 0.37
HDAC9-208ENST00000417496 F13A1P00488 732 aa17.39■□□□□ 0.37
HDAC9-208ENST00000417496 PIP4K2AP48426 406 aaPredicted RBP17.39■□□□□ 0.37
HDAC9-208ENST00000417496 DNM1Q05193 864 aaKnown RBP17.39■□□□□ 0.37
HDAC9-208ENST00000417496 ST3GAL1Q11201 340 aa17.39■□□□□ 0.37
HDAC9-208ENST00000417496 KCNJ4P48050 445 aa17.39■□□□□ 0.37
HDAC9-208ENST00000417496 ME3Q16798 604 aa17.39■□□□□ 0.37
HDAC9-208ENST00000417496 ANKLE2Q86XL3 938 aa17.39■□□□□ 0.37
HDAC9-208ENST00000417496 RUFY2Q8WXA3 655 aa17.39■□□□□ 0.37
HDAC9-208ENST00000417496 TAF6LQ9Y6J9 622 aa17.39■□□□□ 0.37
HDAC9-208ENST00000417496 MED1Q15648 1581 aaPredicted RBP17.39■□□□□ 0.37
HDAC9-208ENST00000417496 ZNF500O60304 480 aaPredicted RBP17.38■□□□□ 0.37
HDAC9-208ENST00000417496 ALDH1L1O75891 902 aa17.38■□□□□ 0.37
HDAC9-208ENST00000417496 PTMAP06454 111 aaKnown RBP17.38■□□□□ 0.37
HDAC9-208ENST00000417496 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
HDAC9-208ENST00000417496 UBE2Q2Q8WVN8 375 aa17.38■□□□□ 0.37
HDAC9-208ENST00000417496 ZNF830Q96NB3 372 aaPredicted RBP17.38■□□□□ 0.37
HDAC9-208ENST00000417496 HCLS1P14317 486 aaPredicted RBP17.38■□□□□ 0.37
HDAC9-208ENST00000417496 NECTIN1Q15223 517 aa17.38■□□□□ 0.37
HDAC9-208ENST00000417496 EVI5LQ96CN4 794 aa17.38■□□□□ 0.37
HDAC9-208ENST00000417496 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
HDAC9-208ENST00000417496 USP25Q9UHP3 1055 aa17.38■□□□□ 0.37
HDAC9-208ENST00000417496 RBM8AQ9Y5S9 174 aaKnown RBP17.38■□□□□ 0.37
HDAC9-208ENST00000417496 CYP46A1Q9Y6A2 500 aa17.38■□□□□ 0.37
HDAC9-208ENST00000417496 VPS37CA5D8V6 355 aaPredicted RBP17.37■□□□□ 0.37
HDAC9-208ENST00000417496 ZC3H6P61129 1189 aaKnown RBP17.37■□□□□ 0.37
HDAC9-208ENST00000417496 PDIA6Q15084 440 aa17.37■□□□□ 0.37
HDAC9-208ENST00000417496 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.37■□□□□ 0.37
HDAC9-208ENST00000417496 ZSWIM6Q9HCJ5 1215 aa17.37■□□□□ 0.37
HDAC9-208ENST00000417496 N4BP2Q86UW6 1770 aaPredicted RBP17.37■□□□□ 0.37
HDAC9-208ENST00000417496 IGKV5-2P06315 115 aa17.37■□□□□ 0.37
HDAC9-208ENST00000417496 G3BP1Q13283 466 aaKnown RBP eCLIP17.37■□□□□ 0.37
HDAC9-208ENST00000417496 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
HDAC9-208ENST00000417496 GPATCH3Q96I76 525 aa17.37■□□□□ 0.37
HDAC9-208ENST00000417496 CHMP4AQ9BY43 222 aa17.37■□□□□ 0.37
HDAC9-208ENST00000417496 CCDC39Q9UFE4 941 aa17.37■□□□□ 0.37
HDAC9-208ENST00000417496 TPCN1Q9ULQ1 816 aa17.37■□□□□ 0.37
HDAC9-208ENST00000417496 CCDC171Q6TFL3 1326 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 VPS53Q5VIR6 699 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 CREB3L3Q68CJ9 461 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 FAM173BQ6P4H8 233 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 GIMAP6Q6P9H5 292 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 MTMR6Q9Y217 621 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 A0A0D9SFI3 127 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 PHF14O94880 888 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 TPM2P07951 284 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
HDAC9-208ENST00000417496 EPHA10Q5JZY3 1008 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 CCDC183Q5T5S1 534 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms