RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 NBPF5PQ86XG9 351 aaPredicted RBP28.85■■■□□ 2.21
ACTB-203ENST00000417101 PNISRQ8TF01 805 aaKnown RBP28.85■■■□□ 2.21
ACTB-203ENST00000417101 COL11A2P13942 1736 aaPredicted RBP28.85■■■□□ 2.21
ACTB-203ENST00000417101 THUMPD2Q9BTF0 503 aaKnown RBP28.84■■■□□ 2.21
ACTB-203ENST00000417101 PNNQ9H307 717 aaKnown RBP28.83■■■□□ 2.21
ACTB-203ENST00000417101 MAPK8IP3Q9UPT6 1336 aa28.83■■■□□ 2.21
ACTB-203ENST00000417101 SRGNP10124 158 aa28.82■■■□□ 2.2
ACTB-203ENST00000417101 NIP7Q9Y221 180 aaKnown RBP eCLIP28.82■■■□□ 2.2
ACTB-203ENST00000417101 DLG5Q8TDM6 1919 aa28.82■■■□□ 2.2
ACTB-203ENST00000417101 STYK1Q6J9G0 422 aa28.81■■■□□ 2.2
ACTB-203ENST00000417101 CNKSR1Q969H4 720 aa28.81■■■□□ 2.2
ACTB-203ENST00000417101 GLTPD2A6NH11 291 aa28.8■■■□□ 2.2
ACTB-203ENST00000417101 MASTLQ96GX5 879 aa28.8■■■□□ 2.2
ACTB-203ENST00000417101 RGL2O15211 777 aa28.79■■■□□ 2.2
ACTB-203ENST00000417101 EIF4A1P60842 406 aaKnown RBP28.79■■■□□ 2.2
ACTB-203ENST00000417101 PRPF40BQ6NWY9 871 aaKnown RBP28.79■■■□□ 2.2
ACTB-203ENST00000417101 TNRC6CQ9HCJ0 1690 aaKnown RBP28.78■■■□□ 2.2
ACTB-203ENST00000417101 FAM177BA6PVY3 158 aa28.78■■■□□ 2.2
ACTB-203ENST00000417101 FSTL1Q12841 308 aa28.78■■■□□ 2.2
ACTB-203ENST00000417101 RALBP1Q15311 655 aa28.78■■■□□ 2.2
ACTB-203ENST00000417101 HLFQ16534 295 aa28.78■■■□□ 2.2
ACTB-203ENST00000417101 TPTE2Q6XPS3 522 aa28.78■■■□□ 2.2
ACTB-203ENST00000417101 NGEFQ8N5V2 710 aa28.78■■■□□ 2.2
ACTB-203ENST00000417101 KDM3BQ7LBC6 1761 aa28.77■■■□□ 2.2
ACTB-203ENST00000417101 RRP7AQ9Y3A4 280 aaKnown RBP28.76■■■□□ 2.19
ACTB-203ENST00000417101 LAMB4A4D0S4 1761 aa28.75■■■□□ 2.19
ACTB-203ENST00000417101 CCDC88AQ3V6T2 1871 aa28.75■■■□□ 2.19
ACTB-203ENST00000417101 TAOK3Q9H2K8 898 aa28.75■■■□□ 2.19
ACTB-203ENST00000417101 SLX4Q8IY92 1834 aa28.75■■■□□ 2.19
ACTB-203ENST00000417101 TIAM2Q8IVF5 1701 aa28.74■■■□□ 2.19
ACTB-203ENST00000417101 VEGFAP15692 232 aaPredicted RBP28.74■■■□□ 2.19
ACTB-203ENST00000417101 ERFEQ4G0M1 354 aa28.74■■■□□ 2.19
ACTB-203ENST00000417101 LTBP3Q9NS15 1303 aa28.73■■■□□ 2.19
ACTB-203ENST00000417101 NPR1P16066 1061 aa28.73■■■□□ 2.19
ACTB-203ENST00000417101 DDX10Q13206 875 aaKnown RBP28.73■■■□□ 2.19
ACTB-203ENST00000417101 SOGA3Q5TF21 947 aa28.73■■■□□ 2.19
ACTB-203ENST00000417101 FER1L6Q2WGJ9 1857 aa28.72■■■□□ 2.19
ACTB-203ENST00000417101 KLRG2A4D1S0 409 aaPredicted RBP28.72■■■□□ 2.19
ACTB-203ENST00000417101 MYL6BP14649 208 aa28.72■■■□□ 2.19
ACTB-203ENST00000417101 DNAJC5GQ8N7S2 189 aa28.72■■■□□ 2.19
ACTB-203ENST00000417101 GTF2E1P29083 439 aaPredicted RBP28.71■■■□□ 2.19
ACTB-203ENST00000417101 RIPK4P57078 832 aa28.71■■■□□ 2.19
ACTB-203ENST00000417101 DPY19L2Q6NUT2 758 aa28.71■■■□□ 2.19
ACTB-203ENST00000417101 TTLL7Q6ZT98 887 aa28.71■■■□□ 2.19
ACTB-203ENST00000417101 SMC1BQ8NDV3 1235 aa28.71■■■□□ 2.19
ACTB-203ENST00000417101 TSPYL4Q9UJ04 414 aa28.71■■■□□ 2.19
ACTB-203ENST00000417101 MAP3K15Q6ZN16 1313 aa28.7■■■□□ 2.19
ACTB-203ENST00000417101 ERVV-1B6SEH8 477 aa28.7■■■□□ 2.18
ACTB-203ENST00000417101 HTRA3P83110 453 aa28.7■■■□□ 2.18
ACTB-203ENST00000417101 KIF6Q6ZMV9 814 aa28.7■■■□□ 2.18
ACTB-203ENST00000417101 C7orf43Q8WVR3 580 aa28.7■■■□□ 2.18
ACTB-203ENST00000417101 CACNA1SQ13698 1873 aa28.7■■■□□ 2.18
ACTB-203ENST00000417101 CCDC93Q567U6 631 aa28.67■■■□□ 2.18
ACTB-203ENST00000417101 ZBTB3Q9H5J0 574 aa28.67■■■□□ 2.18
ACTB-203ENST00000417101 ARFGEF2Q9Y6D5 1785 aa28.67■■■□□ 2.18
ACTB-203ENST00000417101 POTECB2RU33 542 aa28.66■■■□□ 2.18
ACTB-203ENST00000417101 TMPOP42166 694 aaKnown RBP28.66■■■□□ 2.18
ACTB-203ENST00000417101 NYXQ9GZU5 481 aa28.66■■■□□ 2.18
ACTB-203ENST00000417101 MYBBP1AQ9BQG0 1328 aaKnown RBP28.66■■■□□ 2.18
ACTB-203ENST00000417101 WDR90Q96KV7 1748 aa28.66■■■□□ 2.18
ACTB-203ENST00000417101 GPTP24298 496 aa28.65■■■□□ 2.18
ACTB-203ENST00000417101 NUTM1Q86Y26 1132 aa28.65■■■□□ 2.18
ACTB-203ENST00000417101 DICER1Q9UPY3 1922 aaKnown RBP28.65■■■□□ 2.18
ACTB-203ENST00000417101 OLFM4Q6UX06 510 aa28.64■■■□□ 2.18
ACTB-203ENST00000417101 ERBB4Q15303 1308 aa28.64■■■□□ 2.17
ACTB-203ENST00000417101 ABCC12Q96J65 1359 aa28.63■■■□□ 2.17
ACTB-203ENST00000417101 LMOD3Q0VAK6 560 aa28.63■■■□□ 2.17
ACTB-203ENST00000417101 EIF2S2P20042 333 aaKnown RBP28.62■■■□□ 2.17
ACTB-203ENST00000417101 ALDH1B1P30837 517 aa28.62■■■□□ 2.17
ACTB-203ENST00000417101 CCDC146Q8IYE0 955 aa28.62■■■□□ 2.17
ACTB-203ENST00000417101 UBN2Q6ZU65 1347 aa28.62■■■□□ 2.17
ACTB-203ENST00000417101 DDNO94850 711 aaPredicted RBP28.61■■■□□ 2.17
ACTB-203ENST00000417101 FKBP4Q02790 459 aaKnown RBP eCLIP28.61■■■□□ 2.173e-6■■■□□ 15.3
ACTB-203ENST00000417101 BABAM1Q9NWV8 329 aa28.61■■■□□ 2.17
ACTB-203ENST00000417101 NUP98P52948 1817 aa28.61■■■□□ 2.17
ACTB-203ENST00000417101 NEUROD2Q15784 382 aa28.6■■■□□ 2.17
ACTB-203ENST00000417101 CRY2Q49AN0 593 aa28.6■■■□□ 2.17
ACTB-203ENST00000417101 PDIA6Q15084 440 aa28.59■■■□□ 2.17
ACTB-203ENST00000417101 SUSD4Q5VX71 490 aa28.59■■■□□ 2.17
ACTB-203ENST00000417101 GIGYF2Q6Y7W6 1299 aaKnown RBP28.59■■■□□ 2.17
ACTB-203ENST00000417101 ZNF34Q8IZ26 560 aa28.59■■■□□ 2.17
ACTB-203ENST00000417101 RTKN2Q8IZC4 609 aa28.59■■■□□ 2.17
ACTB-203ENST00000417101 KLRG1Q96E93 195 aa28.59■■■□□ 2.17
ACTB-203ENST00000417101 ZNF277Q9NRM2 450 aaPredicted RBP28.59■■■□□ 2.17
ACTB-203ENST00000417101 LRP10Q7Z4F1 713 aa28.58■■■□□ 2.17
ACTB-203ENST00000417101 ANXA1P04083 346 aa28.57■■■□□ 2.16
ACTB-203ENST00000417101 WDR43Q15061 677 aaKnown RBP eCLIP28.57■■■□□ 2.16
ACTB-203ENST00000417101 PROSER3Q2NL68 480 aa28.57■■■□□ 2.16
ACTB-203ENST00000417101 IBTKQ9P2D0 1353 aaPredicted RBP28.57■■■□□ 2.16
ACTB-203ENST00000417101 RPGRQ92834 1020 aaKnown RBP28.56■■■□□ 2.16
ACTB-203ENST00000417101 NTSR2O95665 410 aa28.55■■■□□ 2.16
ACTB-203ENST00000417101 IFFO2Q5TF58 517 aa28.55■■■□□ 2.16
ACTB-203ENST00000417101 NECTIN2Q92692 538 aa28.55■■■□□ 2.16
ACTB-203ENST00000417101 RUNDC1Q96C34 613 aa28.55■■■□□ 2.16
ACTB-203ENST00000417101 RIC1Q4ADV7 1423 aa28.54■■■□□ 2.16
ACTB-203ENST00000417101 HOXA10P31260 410 aaPredicted RBP28.53■■■□□ 2.16
ACTB-203ENST00000417101 PARP10Q53GL7 1025 aa28.53■■■□□ 2.16
ACTB-203ENST00000417101 PPP1R42Q7Z4L9 355 aa28.53■■■□□ 2.16
ACTB-203ENST00000417101 SYNE4Q8N205 404 aa28.53■■■□□ 2.16
ACTB-203ENST00000417101 ADAMTS8Q9UP79 889 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms