RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-206ENST00000416004 ZNF652Q9Y2D9 606 aa11.8□□□□□ -0.52
CHRNA1-206ENST00000416004 LAMB4A4D0S4 1761 aa11.8□□□□□ -0.52
CHRNA1-206ENST00000416004 EIF5P55010 431 aaKnown RBP11.8□□□□□ -0.52
CHRNA1-206ENST00000416004 TNNQ9UQP3 1299 aa11.8□□□□□ -0.52
CHRNA1-206ENST00000416004 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
CHRNA1-206ENST00000416004 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
CHRNA1-206ENST00000416004 EXOC6Q8TAG9 804 aa11.79□□□□□ -0.52
CHRNA1-206ENST00000416004 SMC4Q9NTJ3 1288 aa11.79□□□□□ -0.52
CHRNA1-206ENST00000416004 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
CHRNA1-206ENST00000416004 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-206ENST00000416004 C10orf71Q711Q0 1435 aa11.79□□□□□ -0.52
CHRNA1-206ENST00000416004 KCNQ3O43525 872 aa11.78□□□□□ -0.52
CHRNA1-206ENST00000416004 A1BGP04217 495 aa11.78□□□□□ -0.52
CHRNA1-206ENST00000416004 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-206ENST00000416004 FRAT1Q92837 279 aaPredicted RBP11.78□□□□□ -0.52
CHRNA1-206ENST00000416004 CRBNQ96SW2 442 aa11.78□□□□□ -0.52
CHRNA1-206ENST00000416004 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
CHRNA1-206ENST00000416004 BICDL1Q6ZP65 573 aa11.77□□□□□ -0.53
CHRNA1-206ENST00000416004 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.77□□□□□ -0.53
CHRNA1-206ENST00000416004 SETDB2Q96T68 719 aa11.77□□□□□ -0.53
CHRNA1-206ENST00000416004 TBC1D2BQ9UPU7 963 aa11.77□□□□□ -0.53
CHRNA1-206ENST00000416004 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
CHRNA1-206ENST00000416004 POLRMTO00411 1230 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 SERPINB2P05120 415 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 TM4SF1P30408 202 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 ALDH1L2Q3SY69 923 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 ERICH6BQ5W0A0 696 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 PIM2Q9P1W9 311 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 PDZRN3Q9UPQ7 1066 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 BCS1LQ9Y276 419 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 CARMIL3Q8ND23 1372 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 RLBP1P12271 317 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 NFIXQ14938 502 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 KIF6Q6ZMV9 814 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 NOB1Q9ULX3 412 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-206ENST00000416004 BCORQ6W2J9 1755 aa11.75□□□□□ -0.53
CHRNA1-206ENST00000416004 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-206ENST00000416004 ST5P78524 1137 aa11.75□□□□□ -0.53
CHRNA1-206ENST00000416004 DDR1Q08345 913 aa11.75□□□□□ -0.53
CHRNA1-206ENST00000416004 CLEC4GQ6UXB4 293 aa11.75□□□□□ -0.53
CHRNA1-206ENST00000416004 WWC3Q9ULE0 1092 aa11.75□□□□□ -0.53
CHRNA1-206ENST00000416004 PXDNLA1KZ92 1463 aa11.75□□□□□ -0.53
CHRNA1-206ENST00000416004 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 DPEP1P16444 411 aa11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 H0YIN7 160 aa11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 RGL2O15211 777 aa11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 TRIM27P14373 513 aa11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 PDE6BP35913 854 aa11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 PDE3AQ14432 1141 aa11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 DALRD3Q5D0E6 543 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 CLUAP1Q96AJ1 413 aa11.74□□□□□ -0.53
CHRNA1-206ENST00000416004 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
CHRNA1-206ENST00000416004 GTF2E1P29083 439 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-206ENST00000416004 ZKSCAN2Q63HK3 967 aa11.73□□□□□ -0.53
CHRNA1-206ENST00000416004 TBC1D9BQ66K14 1250 aa11.73□□□□□ -0.53
CHRNA1-206ENST00000416004 CNBD1Q8NA66 436 aa11.73□□□□□ -0.53
CHRNA1-206ENST00000416004 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
CHRNA1-206ENST00000416004 ARFGEF1Q9Y6D6 1849 aa11.73□□□□□ -0.53
CHRNA1-206ENST00000416004 NRXN2Q9P2S2 1712 aa11.73□□□□□ -0.53
CHRNA1-206ENST00000416004 KIF16BQ96L93 1317 aa11.73□□□□□ -0.53
CHRNA1-206ENST00000416004 CAMTA2O94983 1202 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 ARHGAP27Q6ZUM4 889 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 BCL2L12Q9HB09 334 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 COG6Q9Y2V7 657 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 BRCA1P38398 1863 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 MYL6BP14649 208 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 EIF2S2P20042 333 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 ATF7IPQ6VMQ6 1270 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 TPTE2Q6XPS3 522 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 NBPF5PQ86XG9 351 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 KIAA1551Q9HCM1 1747 aa11.72□□□□□ -0.53
CHRNA1-206ENST00000416004 C2CD5Q86YS7 1000 aa11.71□□□□□ -0.53
CHRNA1-206ENST00000416004 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-206ENST00000416004 BRIP1Q9BX63 1249 aa11.71□□□□□ -0.53
CHRNA1-206ENST00000416004 NIP7Q9Y221 180 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHRNA1-206ENST00000416004 DZIP1LQ8IYY4 767 aaKnown RBP11.7□□□□□ -0.54
CHRNA1-206ENST00000416004 NYXQ9GZU5 481 aa11.7□□□□□ -0.54
CHRNA1-206ENST00000416004 DLEC1Q9Y238 1755 aa11.7□□□□□ -0.54
CHRNA1-206ENST00000416004 NUP98P52948 1817 aa11.7□□□□□ -0.54
CHRNA1-206ENST00000416004 ERVV-1B6SEH8 477 aa11.7□□□□□ -0.54
CHRNA1-206ENST00000416004 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
CHRNA1-206ENST00000416004 G2E3Q7L622 706 aa11.7□□□□□ -0.54
CHRNA1-206ENST00000416004 TTLL6Q8N841 843 aa11.7□□□□□ -0.54
CHRNA1-206ENST00000416004 ZNF622Q969S3 477 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHRNA1-206ENST00000416004 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
CHRNA1-206ENST00000416004 IPO8O15397 1037 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-206ENST00000416004 CHRNA5P30532 468 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms