RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 HDGFL1Q5TGJ6 251 aa8.88□□□□□ -0.99
CSTF1-202ENST00000415828 PHTF2Q8N3S3 785 aa8.88□□□□□ -0.99
CSTF1-202ENST00000415828 GRIP2Q9C0E4 1043 aa8.88□□□□□ -0.99
CSTF1-202ENST00000415828 GNRH1P01148 92 aa8.87□□□□□ -0.99
CSTF1-202ENST00000415828 ALG2Q9H553 416 aa8.87□□□□□ -0.99
CSTF1-202ENST00000415828 ZNF777Q9ULD5 760 aaPredicted RBP8.87□□□□□ -0.99
CSTF1-202ENST00000415828 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
CSTF1-202ENST00000415828 CDK13Q14004 1512 aaKnown RBP8.86□□□□□ -0.99
CSTF1-202ENST00000415828 ADAMTS19Q8TE59 1207 aa8.86□□□□□ -0.99
CSTF1-202ENST00000415828 GLMNQ92990 594 aa8.86□□□□□ -0.99
CSTF1-202ENST00000415828 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
CSTF1-202ENST00000415828 PIK3CDO00329 1044 aa8.85□□□□□ -0.99
CSTF1-202ENST00000415828 IL2RAP01589 272 aa8.85□□□□□ -0.99
CSTF1-202ENST00000415828 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
CSTF1-202ENST00000415828 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
CSTF1-202ENST00000415828 RIPOR1Q6ZS17 1223 aa8.85□□□□□ -0.99
CSTF1-202ENST00000415828 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
CSTF1-202ENST00000415828 GAS2L1Q99501 681 aaPredicted RBP8.85□□□□□ -0.99
CSTF1-202ENST00000415828 FAM135BQ49AJ0 1406 aa8.85□□□□□ -0.99
CSTF1-202ENST00000415828 UTRNP46939 3433 aa8.85□□□□□ -0.99
CSTF1-202ENST00000415828 KDM5CP41229 1560 aa8.85□□□□□ -0.99
CSTF1-202ENST00000415828 COL16A1Q07092 1604 aaPredicted RBP8.84□□□□□ -0.99
CSTF1-202ENST00000415828 SKIP12755 728 aa8.84□□□□□ -0.99
CSTF1-202ENST00000415828 CENPCQ03188 943 aa8.84□□□□□ -0.99
CSTF1-202ENST00000415828 USP4Q13107 963 aa8.84□□□□□ -0.99
CSTF1-202ENST00000415828 ZNF772Q68DY9 489 aaPredicted RBP8.84□□□□□ -0.99
CSTF1-202ENST00000415828 KIF27Q86VH2 1401 aa8.84□□□□□ -0.99
CSTF1-202ENST00000415828 CALR3Q96L12 384 aaKnown RBP8.84□□□□□ -0.99
CSTF1-202ENST00000415828 ESYT1Q9BSJ8 1104 aa8.84□□□□□ -0.99
CSTF1-202ENST00000415828 ZC3H13Q5T200 1668 aaKnown RBP8.84□□□□□ -0.99
CSTF1-202ENST00000415828 ADGBQ8N7X0 1667 aa8.84□□□□□ -0.99
CSTF1-202ENST00000415828 ZMYM3Q14202 1370 aa8.84□□□□□ -0.99
CSTF1-202ENST00000415828 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
CSTF1-202ENST00000415828 SPATA31C2B4DYI2 1134 aa8.83□□□□□ -1
CSTF1-202ENST00000415828 STAU1O95793 577 aaKnown RBP8.83□□□□□ -1
CSTF1-202ENST00000415828 ZNF837Q96EG3 531 aaPredicted RBP8.83□□□□□ -1
CSTF1-202ENST00000415828 DYRK1BQ9Y463 629 aa8.83□□□□□ -1
CSTF1-202ENST00000415828 MYO5CQ9NQX4 1742 aa8.83□□□□□ -1
CSTF1-202ENST00000415828 WASLO00401 505 aaPredicted RBP8.82□□□□□ -1
CSTF1-202ENST00000415828 DBN1Q16643 649 aa8.82□□□□□ -1
CSTF1-202ENST00000415828 TAS1R3Q7RTX0 852 aa8.82□□□□□ -1
CSTF1-202ENST00000415828 TRIM22Q8IYM9 498 aa8.82□□□□□ -1
CSTF1-202ENST00000415828 PLPP7Q8NBV4 271 aa8.82□□□□□ -1
CSTF1-202ENST00000415828 TIMMDC1Q9NPL8 285 aa8.82□□□□□ -1
CSTF1-202ENST00000415828 CHIC2Q9UKJ5 165 aa8.82□□□□□ -1
CSTF1-202ENST00000415828 DEPDC5O75140 1603 aa8.82□□□□□ -1
CSTF1-202ENST00000415828 NHSL1Q5SYE7 1610 aa8.82□□□□□ -1
CSTF1-202ENST00000415828 A2ML1A8K2U0 1454 aa8.82□□□□□ -1
CSTF1-202ENST00000415828 SHPRHQ149N8 1683 aa8.81□□□□□ -1
CSTF1-202ENST00000415828 XAGE2Q96GT9 111 aa8.81□□□□□ -1
CSTF1-202ENST00000415828 ETNK1Q9HBU6 452 aa8.81□□□□□ -1
CSTF1-202ENST00000415828 HRH3Q9Y5N1 445 aa8.81□□□□□ -1
CSTF1-202ENST00000415828 KIDINS220Q9ULH0 1771 aa8.81□□□□□ -1
CSTF1-202ENST00000415828 GPR25O00155 361 aa8.8□□□□□ -1
CSTF1-202ENST00000415828 PHKA2P46019 1235 aa8.8□□□□□ -1
CSTF1-202ENST00000415828 GAS6Q14393 721 aa8.8□□□□□ -1
CSTF1-202ENST00000415828 ESCO1Q5FWF5 840 aa8.8□□□□□ -1
CSTF1-202ENST00000415828 MEX3CQ5U5Q3 659 aaKnown RBP8.8□□□□□ -1
CSTF1-202ENST00000415828 WHAMMQ8TF30 809 aa8.8□□□□□ -1
CSTF1-202ENST00000415828 ZSCAN10Q96SZ4 725 aaPredicted RBP8.8□□□□□ -1
CSTF1-202ENST00000415828 GOLGA3Q08378 1498 aa8.79□□□□□ -1
CSTF1-202ENST00000415828 JCADQ9P266 1359 aa8.79□□□□□ -1
CSTF1-202ENST00000415828 SLURP2P0DP57 97 aa8.79□□□□□ -1
CSTF1-202ENST00000415828 MAP7D1Q3KQU3 841 aa8.79□□□□□ -1
CSTF1-202ENST00000415828 WDR44Q5JSH3 913 aa8.79□□□□□ -1
CSTF1-202ENST00000415828 ZNF385CQ66K41 422 aaPredicted RBP8.79□□□□□ -1
CSTF1-202ENST00000415828 TMEM214Q6NUQ4 689 aaKnown RBP8.79□□□□□ -1
CSTF1-202ENST00000415828 SIRT1Q96EB6 747 aa8.79□□□□□ -1
CSTF1-202ENST00000415828 GMCL1Q96IK5 515 aa8.79□□□□□ -1
CSTF1-202ENST00000415828 UCN2Q96RP3 112 aa8.79□□□□□ -1
CSTF1-202ENST00000415828 FHDC1Q9C0D6 1143 aaPredicted RBP8.79□□□□□ -1
CSTF1-202ENST00000415828 PLCH2O75038 1416 aa8.79□□□□□ -1
CSTF1-202ENST00000415828 NPHP4O75161 1426 aaPredicted RBP8.79□□□□□ -1
CSTF1-202ENST00000415828 MED14O60244 1454 aa8.78□□□□□ -1
CSTF1-202ENST00000415828 H7C1W4 665 aa8.78□□□□□ -1
CSTF1-202ENST00000415828 FOXR1Q6PIV2 292 aa8.78□□□□□ -1
CSTF1-202ENST00000415828 TBC1D9Q6ZT07 1266 aa8.78□□□□□ -1
CSTF1-202ENST00000415828 DEPDC4Q8N2C3 294 aa8.78□□□□□ -1
CSTF1-202ENST00000415828 SVOPQ8N4V2 548 aa8.78□□□□□ -1
CSTF1-202ENST00000415828 AFAP1Q8N556 730 aa8.78□□□□□ -1
CSTF1-202ENST00000415828 ABCC1P33527 1531 aa8.78□□□□□ -1
CSTF1-202ENST00000415828 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
CSTF1-202ENST00000415828 ADAMTS2O95450 1211 aa8.77□□□□□ -1.01
CSTF1-202ENST00000415828 F11P03951 625 aa8.77□□□□□ -1.01
CSTF1-202ENST00000415828 GTF2E1P29083 439 aaPredicted RBP8.77□□□□□ -1.01
CSTF1-202ENST00000415828 GTPBP3Q969Y2 492 aaKnown RBP8.77□□□□□ -1.01
CSTF1-202ENST00000415828 CAMTA1Q9Y6Y1 1673 aa8.77□□□□□ -1.01
CSTF1-202ENST00000415828 ZNF518AQ6AHZ1 1483 aa8.77□□□□□ -1.01
CSTF1-202ENST00000415828 ATAD2Q6PL18 1390 aa8.76□□□□□ -1.01
CSTF1-202ENST00000415828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.76□□□□□ -1.01
CSTF1-202ENST00000415828 SRSF11Q05519 484 aaKnown RBP8.76□□□□□ -1.01
CSTF1-202ENST00000415828 NCOA4Q13772 614 aa8.76□□□□□ -1.01
CSTF1-202ENST00000415828 EML3Q32P44 896 aa8.76□□□□□ -1.01
CSTF1-202ENST00000415828 GNASQ5JWF2 1037 aa8.76□□□□□ -1.01
CSTF1-202ENST00000415828 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
CSTF1-202ENST00000415828 NUCKS1Q9H1E3 243 aaKnown RBP8.76□□□□□ -1.01
CSTF1-202ENST00000415828 GPAMQ9HCL2 828 aa8.76□□□□□ -1.01
CSTF1-202ENST00000415828 TFIP11Q9UBB9 837 aaKnown RBP8.76□□□□□ -1.01
CSTF1-202ENST00000415828 ADAMTS8Q9UP79 889 aa8.76□□□□□ -1.01
CSTF1-202ENST00000415828 ATP9BO43861 1147 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms