RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 TPTE2Q6XPS3 522 aa26.83■■□□□ 1.89
PTPRU-203ENST00000415600 CNKSR1Q969H4 720 aa26.83■■□□□ 1.89
PTPRU-203ENST00000415600 THUMPD2Q9BTF0 503 aaKnown RBP26.83■■□□□ 1.89
PTPRU-203ENST00000415600 TSPYL4Q9UJ04 414 aa26.83■■□□□ 1.89
PTPRU-203ENST00000415600 BCORQ6W2J9 1755 aa26.82■■□□□ 1.88
PTPRU-203ENST00000415600 LMNB1P20700 586 aa26.82■■□□□ 1.88
PTPRU-203ENST00000415600 NIP7Q9Y221 180 aaKnown RBP eCLIP26.82■■□□□ 1.88
PTPRU-203ENST00000415600 KIF6Q6ZMV9 814 aa26.81■■□□□ 1.88
PTPRU-203ENST00000415600 CCER2I3L3R5 266 aa26.8■■□□□ 1.88
PTPRU-203ENST00000415600 KIF3CO14782 793 aa26.8■■□□□ 1.88
PTPRU-203ENST00000415600 STYK1Q6J9G0 422 aa26.8■■□□□ 1.88
PTPRU-203ENST00000415600 C16orf71Q8IYS4 520 aaPredicted RBP26.8■■□□□ 1.88
PTPRU-203ENST00000415600 LAMB4A4D0S4 1761 aa26.8■■□□□ 1.88
PTPRU-203ENST00000415600 SOGA3Q5TF21 947 aa26.8■■□□□ 1.88
PTPRU-203ENST00000415600 KDM3BQ7LBC6 1761 aa26.8■■□□□ 1.88
PTPRU-203ENST00000415600 ERBB4Q15303 1308 aa26.79■■□□□ 1.88
PTPRU-203ENST00000415600 GTF2E1P29083 439 aaPredicted RBP26.79■■□□□ 1.88
PTPRU-203ENST00000415600 TMPOP42166 694 aaKnown RBP26.79■■□□□ 1.88
PTPRU-203ENST00000415600 MASTLQ96GX5 879 aa26.79■■□□□ 1.88
PTPRU-203ENST00000415600 ERVV-1B6SEH8 477 aa26.78■■□□□ 1.88
PTPRU-203ENST00000415600 TOMM70O94826 608 aa26.78■■□□□ 1.88
PTPRU-203ENST00000415600 CCDC24Q8N4L8 307 aa26.78■■□□□ 1.88
PTPRU-203ENST00000415600 RRP7AQ9Y3A4 280 aaKnown RBP26.78■■□□□ 1.88
PTPRU-203ENST00000415600 HSPA6P17066 643 aa26.76■■□□□ 1.87
PTPRU-203ENST00000415600 NGEFQ8N5V2 710 aa26.76■■□□□ 1.87
PTPRU-203ENST00000415600 RUNDC1Q96C34 613 aa26.76■■□□□ 1.87
PTPRU-203ENST00000415600 NYXQ9GZU5 481 aa26.76■■□□□ 1.87
PTPRU-203ENST00000415600 SRGNP10124 158 aa26.75■■□□□ 1.87
PTPRU-203ENST00000415600 RASSF7Q02833 373 aa26.75■■□□□ 1.87
PTPRU-203ENST00000415600 CENPBP07199 599 aaPredicted RBP26.75■■□□□ 1.87
PTPRU-203ENST00000415600 MAP3K15Q6ZN16 1313 aa26.74■■□□□ 1.87
PTPRU-203ENST00000415600 ANKRD31Q8N7Z5 1873 aa26.74■■□□□ 1.87
PTPRU-203ENST00000415600 C21orf2O43822 256 aa26.74■■□□□ 1.87
PTPRU-203ENST00000415600 MYL6BP14649 208 aa26.74■■□□□ 1.87
PTPRU-203ENST00000415600 NMRK2Q9NPI5 230 aa26.74■■□□□ 1.87
PTPRU-203ENST00000415600 NPR1P16066 1061 aa26.73■■□□□ 1.87
PTPRU-203ENST00000415600 NEUROD2Q15784 382 aa26.72■■□□□ 1.87
PTPRU-203ENST00000415600 CCDC146Q8IYE0 955 aa26.72■■□□□ 1.87
PTPRU-203ENST00000415600 YTHDC1Q96MU7 727 aaKnown RBP26.72■■□□□ 1.87
PTPRU-203ENST00000415600 PRKRIP1Q9H875 184 aaPredicted RBP26.72■■□□□ 1.87
PTPRU-203ENST00000415600 SBF1O95248 1867 aa26.71■■□□□ 1.87
PTPRU-203ENST00000415600 HLFQ16534 295 aa26.71■■□□□ 1.87
PTPRU-203ENST00000415600 PRPF40BQ6NWY9 871 aaKnown RBP26.71■■□□□ 1.87
PTPRU-203ENST00000415600 ZNF219Q9P2Y4 722 aaPredicted RBP26.71■■□□□ 1.87
PTPRU-203ENST00000415600 NFKBIEO00221 500 aa26.71■■□□□ 1.87
PTPRU-203ENST00000415600 TAOK3Q9H2K8 898 aa26.71■■□□□ 1.87
PTPRU-203ENST00000415600 FAM177BA6PVY3 158 aa26.7■■□□□ 1.86
PTPRU-203ENST00000415600 DPY19L2Q6NUT2 758 aa26.7■■□□□ 1.86
PTPRU-203ENST00000415600 RBM46Q8TBY0 533 aaKnown RBP26.7■■□□□ 1.86
PTPRU-203ENST00000415600 LTBP3Q9NS15 1303 aa26.69■■□□□ 1.86
PTPRU-203ENST00000415600 KLRG2A4D1S0 409 aaPredicted RBP26.68■■□□□ 1.86
PTPRU-203ENST00000415600 EIF2S2P20042 333 aaKnown RBP26.68■■□□□ 1.86
PTPRU-203ENST00000415600 ALDH1B1P30837 517 aa26.68■■□□□ 1.86
PTPRU-203ENST00000415600 COL11A2P13942 1736 aaPredicted RBP26.68■■□□□ 1.86
PTPRU-203ENST00000415600 GLTPD2A6NH11 291 aa26.67■■□□□ 1.86
PTPRU-203ENST00000415600 ADAMTS8Q9UP79 889 aa26.67■■□□□ 1.86
PTPRU-203ENST00000415600 TTLL7Q6ZT98 887 aa26.67■■□□□ 1.86
PTPRU-203ENST00000415600 ZBTB3Q9H5J0 574 aa26.67■■□□□ 1.86
PTPRU-203ENST00000415600 RRAGCQ9HB90 399 aa26.67■■□□□ 1.86
PTPRU-203ENST00000415600 APLP1P51693 650 aa26.66■■□□□ 1.86
PTPRU-203ENST00000415600 ERFEQ4G0M1 354 aa26.66■■□□□ 1.86
PTPRU-203ENST00000415600 CCDC93Q567U6 631 aa26.66■■□□□ 1.86
PTPRU-203ENST00000415600 IBTKQ9P2D0 1353 aaPredicted RBP26.66■■□□□ 1.86
PTPRU-203ENST00000415600 FSTL1Q12841 308 aa26.65■■□□□ 1.86
PTPRU-203ENST00000415600 LAS1LQ9Y4W2 734 aaKnown RBP26.65■■□□□ 1.86
PTPRU-203ENST00000415600 TNRC6CQ9HCJ0 1690 aaKnown RBP26.64■■□□□ 1.86
PTPRU-203ENST00000415600 PARP10Q53GL7 1025 aa26.64■■□□□ 1.86
PTPRU-203ENST00000415600 GIGYF2Q6Y7W6 1299 aaKnown RBP26.64■■□□□ 1.86
PTPRU-203ENST00000415600 PPP1R42Q7Z4L9 355 aa26.64■■□□□ 1.86
PTPRU-203ENST00000415600 CHL1O00533 1208 aa26.63■■□□□ 1.85
PTPRU-203ENST00000415600 VEGFAP15692 232 aaPredicted RBP26.63■■□□□ 1.85
PTPRU-203ENST00000415600 GPTP24298 496 aa26.63■■□□□ 1.85
PTPRU-203ENST00000415600 CALD1Q05682 793 aaKnown RBP26.63■■□□□ 1.85
PTPRU-203ENST00000415600 HSP90AB3PQ58FF7 597 aa26.62■■□□□ 1.85
PTPRU-203ENST00000415600 RTKN2Q8IZC4 609 aa26.62■■□□□ 1.85
PTPRU-203ENST00000415600 RPGRQ92834 1020 aaKnown RBP26.62■■□□□ 1.85
PTPRU-203ENST00000415600 TRIM35Q9UPQ4 493 aa26.61■■□□□ 1.85
PTPRU-203ENST00000415600 SLX4Q8IY92 1834 aa26.6■■□□□ 1.85
PTPRU-203ENST00000415600 ARFGEF2Q9Y6D5 1785 aa26.6■■□□□ 1.85
PTPRU-203ENST00000415600 HOXB7P09629 217 aa26.6■■□□□ 1.85
PTPRU-203ENST00000415600 PRELPP51888 382 aa26.6■■□□□ 1.85
PTPRU-203ENST00000415600 NUTM1Q86Y26 1132 aa26.6■■□□□ 1.85
PTPRU-203ENST00000415600 ZNF34Q8IZ26 560 aa26.6■■□□□ 1.85
PTPRU-203ENST00000415600 SMC1BQ8NDV3 1235 aa26.6■■□□□ 1.85
PTPRU-203ENST00000415600 FER1L6Q2WGJ9 1857 aa26.6■■□□□ 1.85
PTPRU-203ENST00000415600 NUP98P52948 1817 aa26.6■■□□□ 1.85
PTPRU-203ENST00000415600 PDIA6Q15084 440 aa26.58■■□□□ 1.85
PTPRU-203ENST00000415600 CRY2Q49AN0 593 aa26.58■■□□□ 1.85
PTPRU-203ENST00000415600 C7orf43Q8WVR3 580 aa26.58■■□□□ 1.85
PTPRU-203ENST00000415600 TIAM2Q8IVF5 1701 aa26.58■■□□□ 1.85
PTPRU-203ENST00000415600 RIC1Q4ADV7 1423 aa26.58■■□□□ 1.85
PTPRU-203ENST00000415600 CC2D2BQ6DHV5 1058 aa26.58■■□□□ 1.85
PTPRU-203ENST00000415600 CFAP44Q96MT7 982 aa26.58■■□□□ 1.85
PTPRU-203ENST00000415600 DDX21Q9NR30 783 aaKnown RBP eCLIP26.58■■□□□ 1.85
PTPRU-203ENST00000415600 CCDC88AQ3V6T2 1871 aa26.57■■□□□ 1.84
PTPRU-203ENST00000415600 RNF123Q5XPI4 1314 aa26.57■■□□□ 1.84
PTPRU-203ENST00000415600 FKBP4Q02790 459 aaKnown RBP eCLIP26.57■■□□□ 1.84
PTPRU-203ENST00000415600 GRIPAP1Q4V328 841 aa26.57■■□□□ 1.84
PTPRU-203ENST00000415600 SUSD4Q5VX71 490 aa26.57■■□□□ 1.84
PTPRU-203ENST00000415600 TMX4Q9H1E5 349 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms