RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 C1orf167Q5SNV9 1468 aa16.08■□□□□ 0.17
CSTF2-203ENST00000415585 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
CSTF2-203ENST00000415585 C9orf78Q9NZ63 289 aaPredicted RBP16.08■□□□□ 0.16
CSTF2-203ENST00000415585 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.16
CSTF2-203ENST00000415585 WDR33Q9C0J8 1336 aaKnown RBP16.08■□□□□ 0.16
CSTF2-203ENST00000415585 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
CSTF2-203ENST00000415585 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
CSTF2-203ENST00000415585 PDLIM2Q96JY6 352 aa16.07■□□□□ 0.16
CSTF2-203ENST00000415585 CLASRPQ8N2M8 674 aaKnown RBP16.07■□□□□ 0.16
CSTF2-203ENST00000415585 SPG7Q9UQ90 795 aa16.07■□□□□ 0.16
CSTF2-203ENST00000415585 RPAP1Q9BWH6 1393 aaPredicted RBP16.07■□□□□ 0.16
CSTF2-203ENST00000415585 ANKRD24Q8TF21 1146 aa16.06■□□□□ 0.16
CSTF2-203ENST00000415585 DDX17Q92841 729 aaKnown RBP16.06■□□□□ 0.16
CSTF2-203ENST00000415585 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
CSTF2-203ENST00000415585 PRAMEF22A3QJZ6 481 aa16.06■□□□□ 0.16
CSTF2-203ENST00000415585 AK2P54819 239 aa16.06■□□□□ 0.16
CSTF2-203ENST00000415585 ECHDC1Q9NTX5 307 aa16.06■□□□□ 0.16
CSTF2-203ENST00000415585 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
CSTF2-203ENST00000415585 CWF19L2Q2TBE0 894 aaKnown RBP16.05■□□□□ 0.16
CSTF2-203ENST00000415585 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
CSTF2-203ENST00000415585 HS1BP3Q53T59 392 aa16.05■□□□□ 0.16
CSTF2-203ENST00000415585 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
CSTF2-203ENST00000415585 DIAPH3Q9NSV4 1193 aa16.05■□□□□ 0.16
CSTF2-203ENST00000415585 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
CSTF2-203ENST00000415585 MST1RQ04912 1400 aa16.05■□□□□ 0.16
CSTF2-203ENST00000415585 ADAMTS7Q9UKP4 1686 aa16.05■□□□□ 0.16
CSTF2-203ENST00000415585 RUFY3Q7L099 469 aa16.04■□□□□ 0.16
CSTF2-203ENST00000415585 ERC1Q8IUD2 1116 aa16.04■□□□□ 0.16
CSTF2-203ENST00000415585 GDPD2Q9HCC8 539 aa16.04■□□□□ 0.16
CSTF2-203ENST00000415585 ATF3P18847 181 aa16.04■□□□□ 0.16
CSTF2-203ENST00000415585 RUFY2Q8WXA3 655 aa16.04■□□□□ 0.16
CSTF2-203ENST00000415585 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
CSTF2-203ENST00000415585 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
CSTF2-203ENST00000415585 HDAC5Q9UQL6 1122 aa16.04■□□□□ 0.16
CSTF2-203ENST00000415585 TRPM3Q9HCF6 1732 aaPredicted RBP16.04■□□□□ 0.16
CSTF2-203ENST00000415585 GADD45BO75293 160 aaPredicted RBP16.03■□□□□ 0.16
CSTF2-203ENST00000415585 IFIT2P09913 472 aaKnown RBP16.03■□□□□ 0.16
CSTF2-203ENST00000415585 MSNP26038 577 aaKnown RBP16.03■□□□□ 0.16
CSTF2-203ENST00000415585 KRT28Q7Z3Y7 464 aa16.03■□□□□ 0.16
CSTF2-203ENST00000415585 USP48Q86UV5 1035 aa16.03■□□□□ 0.16
CSTF2-203ENST00000415585 SYAP1Q96A49 352 aaPredicted RBP16.03■□□□□ 0.16
CSTF2-203ENST00000415585 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
CSTF2-203ENST00000415585 CASTP20810 708 aaKnown RBP16.03■□□□□ 0.16
CSTF2-203ENST00000415585 PTH1RQ03431 593 aa16.03■□□□□ 0.16
CSTF2-203ENST00000415585 LARP6Q9BRS8 491 aaKnown RBP16.03■□□□□ 0.16
CSTF2-203ENST00000415585 AXIN2Q9Y2T1 843 aa16.03■□□□□ 0.16
CSTF2-203ENST00000415585 GRM8O00222 908 aa16.02■□□□□ 0.15
CSTF2-203ENST00000415585 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.15
CSTF2-203ENST00000415585 AACSQ86V21 672 aa16.02■□□□□ 0.15
CSTF2-203ENST00000415585 LINS1Q8NG48 757 aa16.02■□□□□ 0.15
CSTF2-203ENST00000415585 SUCLG2Q96I99 432 aa16.02■□□□□ 0.15
CSTF2-203ENST00000415585 UTYO14607 1347 aa16.02■□□□□ 0.15
CSTF2-203ENST00000415585 CPA1P15085 419 aa16.01■□□□□ 0.15
CSTF2-203ENST00000415585 TMEM87AQ8NBN3 555 aa16.01■□□□□ 0.15
CSTF2-203ENST00000415585 EVI5LQ96CN4 794 aa16.01■□□□□ 0.15
CSTF2-203ENST00000415585 KAZALD1Q96I82 304 aa16.01■□□□□ 0.15
CSTF2-203ENST00000415585 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.01■□□□□ 0.15
CSTF2-203ENST00000415585 XIRP1Q702N8 1843 aaKnown RBP16.01■□□□□ 0.15
CSTF2-203ENST00000415585 ZSCAN22P10073 491 aaPredicted RBP16.01■□□□□ 0.15
CSTF2-203ENST00000415585 TSPY26PQ9H489 355 aa16.01■□□□□ 0.15
CSTF2-203ENST00000415585 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
CSTF2-203ENST00000415585 NOL7Q9UMY1 257 aaKnown RBP16.01■□□□□ 0.15
CSTF2-203ENST00000415585 C5P01031 1676 aa16.01■□□□□ 0.15
CSTF2-203ENST00000415585 STX6O43752 255 aa16■□□□□ 0.15
CSTF2-203ENST00000415585 LARGE1O95461 756 aa16■□□□□ 0.15
CSTF2-203ENST00000415585 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
CSTF2-203ENST00000415585 SYT1P21579 422 aa16■□□□□ 0.15
CSTF2-203ENST00000415585 PRPF40BQ6NWY9 871 aaKnown RBP16■□□□□ 0.15
CSTF2-203ENST00000415585 KCNB2Q92953 911 aa16■□□□□ 0.15
CSTF2-203ENST00000415585 BICC1Q9H694 974 aaKnown RBP16■□□□□ 0.15
CSTF2-203ENST00000415585 SCN11AQ9UI33 1791 aa16■□□□□ 0.15
CSTF2-203ENST00000415585 SASH1O94885 1247 aa15.99■□□□□ 0.15
CSTF2-203ENST00000415585 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
CSTF2-203ENST00000415585 PDIA6Q15084 440 aa15.99■□□□□ 0.15
CSTF2-203ENST00000415585 ADCK5Q3MIX3 580 aa15.99■□□□□ 0.15
CSTF2-203ENST00000415585 RNF214Q8ND24 703 aa15.99■□□□□ 0.15
CSTF2-203ENST00000415585 JAKMIP1Q96N16 626 aaKnown RBP15.99■□□□□ 0.15
CSTF2-203ENST00000415585 SMC3Q9UQE7 1217 aa15.99■□□□□ 0.15
CSTF2-203ENST00000415585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.99■□□□□ 0.15
CSTF2-203ENST00000415585 VPS53Q5VIR6 699 aa15.99■□□□□ 0.15
CSTF2-203ENST00000415585 TM6SF1Q9BZW5 370 aa15.99■□□□□ 0.15
CSTF2-203ENST00000415585 ZSWIM6Q9HCJ5 1215 aa15.99■□□□□ 0.15
CSTF2-203ENST00000415585 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.99■□□□□ 0.15
CSTF2-203ENST00000415585 CNPY2Q9Y2B0 182 aa15.99■□□□□ 0.15
CSTF2-203ENST00000415585 PHF14O94880 888 aa15.98■□□□□ 0.15
CSTF2-203ENST00000415585 G3BP1Q13283 466 aaKnown RBP eCLIP15.98■□□□□ 0.15
CSTF2-203ENST00000415585 NECTIN1Q15223 517 aa15.98■□□□□ 0.15
CSTF2-203ENST00000415585 CCDC171Q6TFL3 1326 aa15.98■□□□□ 0.15
CSTF2-203ENST00000415585 CADPS2Q86UW7 1296 aa15.98■□□□□ 0.15
CSTF2-203ENST00000415585 EAF2Q96CJ1 260 aaPredicted RBP15.98■□□□□ 0.15
CSTF2-203ENST00000415585 PDRG1Q9NUG6 133 aa15.98■□□□□ 0.15
CSTF2-203ENST00000415585 DCCP43146 1447 aa15.98■□□□□ 0.15
CSTF2-203ENST00000415585 F13A1P00488 732 aa15.98■□□□□ 0.15
CSTF2-203ENST00000415585 IGKV5-2P06315 115 aa15.98■□□□□ 0.15
CSTF2-203ENST00000415585 ERBB3P21860 1342 aa15.97■□□□□ 0.15
CSTF2-203ENST00000415585 OFD1O75665 1012 aa15.97■□□□□ 0.15
CSTF2-203ENST00000415585 CCDC83Q8IWF9 413 aa15.97■□□□□ 0.15
CSTF2-203ENST00000415585 CCDC8Q9H0W5 538 aaPredicted RBP15.97■□□□□ 0.15
CSTF2-203ENST00000415585 CYP46A1Q9Y6A2 500 aa15.97■□□□□ 0.15
CSTF2-203ENST00000415585 ZSCAN31Q96LW9 406 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms