RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 NLGN2Q8NFZ4 835 aa12.76□□□□□ -0.37
LINC01090-201ENST00000415357 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
LINC01090-201ENST00000415357 KCNQ3O43525 872 aa12.75□□□□□ -0.37
LINC01090-201ENST00000415357 UTRNP46939 3433 aa12.75□□□□□ -0.37
LINC01090-201ENST00000415357 PLCB2Q00722 1185 aa12.75□□□□□ -0.37
LINC01090-201ENST00000415357 GOLGB1Q14789 3259 aaKnown RBP12.75□□□□□ -0.37
LINC01090-201ENST00000415357 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
LINC01090-201ENST00000415357 INTS5Q6P9B9 1019 aaKnown RBP12.75□□□□□ -0.37
LINC01090-201ENST00000415357 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
LINC01090-201ENST00000415357 ZNF496Q96IT1 587 aaPredicted RBP12.75□□□□□ -0.37
LINC01090-201ENST00000415357 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
LINC01090-201ENST00000415357 BOLA1Q9Y3E2 137 aa12.75□□□□□ -0.37
LINC01090-201ENST00000415357 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
LINC01090-201ENST00000415357 ZNF790Q6PG37 636 aa12.74□□□□□ -0.37
LINC01090-201ENST00000415357 RTF1Q92541 710 aaKnown RBP12.74□□□□□ -0.37
LINC01090-201ENST00000415357 L3MBTL3Q96JM7 780 aaPredicted RBP12.74□□□□□ -0.37
LINC01090-201ENST00000415357 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
LINC01090-201ENST00000415357 CCDC87Q9NVE4 849 aa12.74□□□□□ -0.37
LINC01090-201ENST00000415357 SRP68Q9UHB9 627 aaKnown RBP12.74□□□□□ -0.37
LINC01090-201ENST00000415357 DLG5Q8TDM6 1919 aa12.74□□□□□ -0.37
LINC01090-201ENST00000415357 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
LINC01090-201ENST00000415357 RFC4P35249 363 aa12.73□□□□□ -0.37
LINC01090-201ENST00000415357 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
LINC01090-201ENST00000415357 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
LINC01090-201ENST00000415357 SOS1Q07889 1333 aaPredicted RBP12.72□□□□□ -0.37
LINC01090-201ENST00000415357 MAPK8IP3Q9UPT6 1336 aa12.72□□□□□ -0.37
LINC01090-201ENST00000415357 NEFMP07197 916 aa12.72□□□□□ -0.37
LINC01090-201ENST00000415357 MMP10P09238 476 aa12.72□□□□□ -0.37
LINC01090-201ENST00000415357 GYS1P13807 737 aa12.72□□□□□ -0.37
LINC01090-201ENST00000415357 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
LINC01090-201ENST00000415357 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
LINC01090-201ENST00000415357 THUMPD2Q9BTF0 503 aaKnown RBP12.72□□□□□ -0.37
LINC01090-201ENST00000415357 USP42Q9H9J4 1324 aaKnown RBP12.71□□□□□ -0.37
LINC01090-201ENST00000415357 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
LINC01090-201ENST00000415357 COL15A1P39059 1388 aa12.7□□□□□ -0.38
LINC01090-201ENST00000415357 PRAMEF22A3QJZ6 481 aa12.7□□□□□ -0.38
LINC01090-201ENST00000415357 HTATSF1O43719 755 aaKnown RBP12.7□□□□□ -0.38
LINC01090-201ENST00000415357 POTEJP0CG39 1038 aa12.7□□□□□ -0.38
LINC01090-201ENST00000415357 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
LINC01090-201ENST00000415357 CCDC146Q8IYE0 955 aa12.7□□□□□ -0.38
LINC01090-201ENST00000415357 FMNL2Q96PY5 1086 aa12.7□□□□□ -0.38
LINC01090-201ENST00000415357 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
LINC01090-201ENST00000415357 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
LINC01090-201ENST00000415357 LHX8Q68G74 356 aa12.69□□□□□ -0.38
LINC01090-201ENST00000415357 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
LINC01090-201ENST00000415357 STARD3NLO95772 234 aa12.68□□□□□ -0.38
LINC01090-201ENST00000415357 WDR43Q15061 677 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01090-201ENST00000415357 GPR162Q16538 588 aa12.68□□□□□ -0.38
LINC01090-201ENST00000415357 USPL1Q5W0Q7 1092 aa12.68□□□□□ -0.38
LINC01090-201ENST00000415357 NLGN1Q8N2Q7 840 aa12.68□□□□□ -0.38
LINC01090-201ENST00000415357 PNNQ9H307 717 aaKnown RBP12.68□□□□□ -0.38
LINC01090-201ENST00000415357 RRP7AQ9Y3A4 280 aaKnown RBP12.68□□□□□ -0.38
LINC01090-201ENST00000415357 CD2APQ9Y5K6 639 aa12.68□□□□□ -0.38
LINC01090-201ENST00000415357 KDM3BQ7LBC6 1761 aa12.68□□□□□ -0.38
LINC01090-201ENST00000415357 A1BGP04217 495 aa12.67□□□□□ -0.38
LINC01090-201ENST00000415357 YBX3P16989 372 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC01090-201ENST00000415357 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
LINC01090-201ENST00000415357 DDR1Q08345 913 aa12.67□□□□□ -0.38
LINC01090-201ENST00000415357 TAF7Q15545 349 aaPredicted RBP12.67□□□□□ -0.38
LINC01090-201ENST00000415357 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
LINC01090-201ENST00000415357 ZNF330Q9Y3S2 320 aaPredicted RBP12.67□□□□□ -0.38
LINC01090-201ENST00000415357 KIAA1551Q9HCM1 1747 aa12.66□□□□□ -0.38
LINC01090-201ENST00000415357 C10orf71Q711Q0 1435 aa12.66□□□□□ -0.38
LINC01090-201ENST00000415357 ZPR1O75312 459 aa12.66□□□□□ -0.38
LINC01090-201ENST00000415357 YY1P25490 414 aa12.66□□□□□ -0.38
LINC01090-201ENST00000415357 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
LINC01090-201ENST00000415357 EIF5P55010 431 aaKnown RBP12.66□□□□□ -0.38
LINC01090-201ENST00000415357 RIPK4P57078 832 aa12.66□□□□□ -0.38
LINC01090-201ENST00000415357 TEX13AQ9BXU3 409 aaPredicted RBP12.66□□□□□ -0.38
LINC01090-201ENST00000415357 ADAMTS8Q9UP79 889 aa12.66□□□□□ -0.38
LINC01090-201ENST00000415357 USP16Q9Y5T5 823 aa12.66□□□□□ -0.38
LINC01090-201ENST00000415357 NEUROD2Q15784 382 aa12.65□□□□□ -0.38
LINC01090-201ENST00000415357 CCDC184Q52MB2 194 aa12.65□□□□□ -0.38
LINC01090-201ENST00000415357 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
LINC01090-201ENST00000415357 NARFQ9UHQ1 456 aa12.65□□□□□ -0.38
LINC01090-201ENST00000415357 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
LINC01090-201ENST00000415357 PXDNLA1KZ92 1463 aa12.65□□□□□ -0.38
LINC01090-201ENST00000415357 KIF13BQ9NQT8 1826 aa12.65□□□□□ -0.39
LINC01090-201ENST00000415357 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
LINC01090-201ENST00000415357 SNRPA1P09661 255 aaKnown RBP12.64□□□□□ -0.39
LINC01090-201ENST00000415357 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
LINC01090-201ENST00000415357 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
LINC01090-201ENST00000415357 TBC1D2BQ9UPU7 963 aa12.64□□□□□ -0.39
LINC01090-201ENST00000415357 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
LINC01090-201ENST00000415357 N4BP2Q86UW6 1770 aaPredicted RBP12.64□□□□□ -0.39
LINC01090-201ENST00000415357 POLRMTO00411 1230 aaKnown RBP12.63□□□□□ -0.39
LINC01090-201ENST00000415357 TM4SF1P30408 202 aa12.63□□□□□ -0.39
LINC01090-201ENST00000415357 IL6STP40189 918 aaPredicted RBP12.63□□□□□ -0.39
LINC01090-201ENST00000415357 NFIXQ14938 502 aa12.63□□□□□ -0.39
LINC01090-201ENST00000415357 SCUBE2Q9NQ36 999 aa12.63□□□□□ -0.39
LINC01090-201ENST00000415357 EIF4A1P60842 406 aaKnown RBP12.62□□□□□ -0.39
LINC01090-201ENST00000415357 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
LINC01090-201ENST00000415357 PNISRQ8TF01 805 aaKnown RBP12.62□□□□□ -0.39
LINC01090-201ENST00000415357 AFDNP55196 1824 aaKnown RBP12.61□□□□□ -0.39
LINC01090-201ENST00000415357 A0A087WZG4 1122 aa12.61□□□□□ -0.39
LINC01090-201ENST00000415357 A0A0G2JLW4 131 aa12.61□□□□□ -0.39
LINC01090-201ENST00000415357 NBPF26B4DH59 902 aa12.61□□□□□ -0.39
LINC01090-201ENST00000415357 LMOD3Q0VAK6 560 aa12.61□□□□□ -0.39
LINC01090-201ENST00000415357 NBPF10Q6P3W6 841 aaKnown RBP12.61□□□□□ -0.39
LINC01090-201ENST00000415357 NBPF15Q8N660 670 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms