RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 BCRP11274 1271 aa10.9□□□□□ -0.66
ATG4C-204ENST00000414558 TNP2Q05952 138 aa10.9□□□□□ -0.66
ATG4C-204ENST00000414558 CHMP7Q8WUX9 453 aaPredicted RBP10.9□□□□□ -0.66
ATG4C-204ENST00000414558 C2orf49Q9BVC5 232 aaPredicted RBP10.9□□□□□ -0.66
ATG4C-204ENST00000414558 PHACTR1Q9C0D0 580 aa10.9□□□□□ -0.66
ATG4C-204ENST00000414558 IGFBP4P22692 258 aa10.89□□□□□ -0.67
ATG4C-204ENST00000414558 CTBSQ01459 385 aa10.89□□□□□ -0.67
ATG4C-204ENST00000414558 LRRC69Q6ZNQ3 347 aa10.89□□□□□ -0.67
ATG4C-204ENST00000414558 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
ATG4C-204ENST00000414558 C7orf43Q8WVR3 580 aa10.89□□□□□ -0.67
ATG4C-204ENST00000414558 KLRG1Q96E93 195 aa10.89□□□□□ -0.67
ATG4C-204ENST00000414558 GDF2Q9UK05 429 aaPredicted RBP10.89□□□□□ -0.67
ATG4C-204ENST00000414558 NOVA2Q9UNW9 492 aaKnown RBP10.89□□□□□ -0.67
ATG4C-204ENST00000414558 FAM182BQ5T319 152 aa10.88□□□□□ -0.67
ATG4C-204ENST00000414558 ANKIB1Q9P2G1 1089 aa10.88□□□□□ -0.67
ATG4C-204ENST00000414558 LAMC2Q13753 1193 aa10.87□□□□□ -0.67
ATG4C-204ENST00000414558 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
ATG4C-204ENST00000414558 C2CD2LO14523 706 aa10.86□□□□□ -0.67
ATG4C-204ENST00000414558 ELOAQ14241 798 aaKnown RBP10.86□□□□□ -0.67
ATG4C-204ENST00000414558 ALDH16A1Q8IZ83 802 aa10.86□□□□□ -0.67
ATG4C-204ENST00000414558 GOLGA6L1Q8N7Z2 621 aa10.86□□□□□ -0.67
ATG4C-204ENST00000414558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.85□□□□□ -0.67
ATG4C-204ENST00000414558 RNF225M0QZC1 329 aaPredicted RBP10.85□□□□□ -0.67
ATG4C-204ENST00000414558 EFSO43281 561 aa10.85□□□□□ -0.67
ATG4C-204ENST00000414558 OIP5O43482 229 aa10.85□□□□□ -0.67
ATG4C-204ENST00000414558 LGR5O75473 907 aa10.85□□□□□ -0.67
ATG4C-204ENST00000414558 CD33P20138 364 aa10.85□□□□□ -0.67
ATG4C-204ENST00000414558 MARSP56192 900 aaKnown RBP10.85□□□□□ -0.67
ATG4C-204ENST00000414558 HIF1AQ16665 826 aa10.85□□□□□ -0.67
ATG4C-204ENST00000414558 ARAFP10398 606 aa10.84□□□□□ -0.67
ATG4C-204ENST00000414558 WEE1P30291 646 aa10.84□□□□□ -0.67
ATG4C-204ENST00000414558 SRPK2P78362 688 aaKnown RBP10.84□□□□□ -0.67
ATG4C-204ENST00000414558 SWI5Q1ZZU3 235 aa10.84□□□□□ -0.67
ATG4C-204ENST00000414558 NEDD1Q8NHV4 660 aa10.84□□□□□ -0.67
ATG4C-204ENST00000414558 PBXIP1Q96AQ6 731 aa10.84□□□□□ -0.67
ATG4C-204ENST00000414558 MARK1Q9P0L2 795 aa10.84□□□□□ -0.67
ATG4C-204ENST00000414558 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
ATG4C-204ENST00000414558 FOXO3O43524 673 aa10.83□□□□□ -0.68
ATG4C-204ENST00000414558 ATG7O95352 703 aa10.83□□□□□ -0.68
ATG4C-204ENST00000414558 NGLY1Q96IV0 654 aa10.83□□□□□ -0.68
ATG4C-204ENST00000414558 RTN1Q16799 776 aa10.82□□□□□ -0.68
ATG4C-204ENST00000414558 SLCO4C1Q6ZQN7 724 aa10.82□□□□□ -0.68
ATG4C-204ENST00000414558 SCARF2Q96GP6 870 aaPredicted RBP10.82□□□□□ -0.68
ATG4C-204ENST00000414558 HSH2DQ96JZ2 352 aa10.82□□□□□ -0.68
ATG4C-204ENST00000414558 SUSD3Q96L08 255 aa10.82□□□□□ -0.68
ATG4C-204ENST00000414558 AVENQ9NQS1 362 aaPredicted RBP10.82□□□□□ -0.68
ATG4C-204ENST00000414558 HCN2Q9UL51 889 aa10.82□□□□□ -0.68
ATG4C-204ENST00000414558 ZMIZ1Q9ULJ6 1067 aa10.82□□□□□ -0.68
ATG4C-204ENST00000414558 VTI1AQ96AJ9 217 aa10.81□□□□□ -0.68
ATG4C-204ENST00000414558 GGA1Q9UJY5 639 aa10.81□□□□□ -0.68
ATG4C-204ENST00000414558 GALNT6Q8NCL4 622 aa10.8□□□□□ -0.68
ATG4C-204ENST00000414558 EDARADDQ8WWZ3 215 aa10.8□□□□□ -0.68
ATG4C-204ENST00000414558 CEP63Q96MT8 703 aa10.8□□□□□ -0.68
ATG4C-204ENST00000414558 STRN4Q9NRL3 753 aa10.8□□□□□ -0.68
ATG4C-204ENST00000414558 PRR12Q9ULL5 1215 aa10.8□□□□□ -0.68
ATG4C-204ENST00000414558 ADH6P28332 368 aa10.79□□□□□ -0.68
ATG4C-204ENST00000414558 KCNMA1Q12791 1236 aa10.79□□□□□ -0.68
ATG4C-204ENST00000414558 ERICH6Q7L0X2 663 aa10.79□□□□□ -0.68
ATG4C-204ENST00000414558 ZNF280CQ8ND82 737 aa10.79□□□□□ -0.68
ATG4C-204ENST00000414558 STK32AQ8WU08 396 aa10.79□□□□□ -0.68
ATG4C-204ENST00000414558 BRD7Q9NPI1 651 aa10.79□□□□□ -0.68
ATG4C-204ENST00000414558 DNMT3AQ9Y6K1 912 aaPredicted RBP10.79□□□□□ -0.68
ATG4C-204ENST00000414558 TYRO3Q06418 890 aa10.78□□□□□ -0.68
ATG4C-204ENST00000414558 ZNF468Q5VIY5 522 aaPredicted RBP10.78□□□□□ -0.68
ATG4C-204ENST00000414558 PODNQ7Z5L7 613 aa10.78□□□□□ -0.68
ATG4C-204ENST00000414558 CCDC82Q8N4S0 544 aa10.78□□□□□ -0.68
ATG4C-204ENST00000414558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.78□□□□□ -0.68
ATG4C-204ENST00000414558 NEURL1BA8MQ27 555 aa10.77□□□□□ -0.69
ATG4C-204ENST00000414558 IER5Q5VY09 327 aa10.77□□□□□ -0.69
ATG4C-204ENST00000414558 C1orf229Q6ZS94 237 aaPredicted RBP10.77□□□□□ -0.69
ATG4C-204ENST00000414558 SHISA8B8ZZ34 492 aa10.76□□□□□ -0.69
ATG4C-204ENST00000414558 KCNQ4P56696 695 aa10.76□□□□□ -0.69
ATG4C-204ENST00000414558 SFSWAPQ12872 951 aaKnown RBP10.76□□□□□ -0.69
ATG4C-204ENST00000414558 BTLAQ7Z6A9 289 aa10.76□□□□□ -0.69
ATG4C-204ENST00000414558 PHF20L1A8MW92 1017 aa10.75□□□□□ -0.69
ATG4C-204ENST00000414558 TGFBR3LH3BV60 316 aa10.75□□□□□ -0.69
ATG4C-204ENST00000414558 EPXP11678 715 aa10.75□□□□□ -0.69
ATG4C-204ENST00000414558 FAM69CQ0P6D2 419 aa10.75□□□□□ -0.69
ATG4C-204ENST00000414558 TMEM164Q5U3C3 297 aa10.75□□□□□ -0.69
ATG4C-204ENST00000414558 BEND7Q8N7W2 519 aaPredicted RBP10.75□□□□□ -0.69
ATG4C-204ENST00000414558 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
ATG4C-204ENST00000414558 PRMT3O60678 531 aa10.74□□□□□ -0.69
ATG4C-204ENST00000414558 AMPD1P23109 780 aa10.74□□□□□ -0.69
ATG4C-204ENST00000414558 NEUROD1Q13562 356 aa10.74□□□□□ -0.69
ATG4C-204ENST00000414558 KANK3Q6NY19 840 aa10.74□□□□□ -0.69
ATG4C-204ENST00000414558 QTRT2Q9H974 415 aaKnown RBP10.74□□□□□ -0.69
ATG4C-204ENST00000414558 KCNH4Q9UQ05 1017 aa10.74□□□□□ -0.69
ATG4C-204ENST00000414558 IRS1P35568 1242 aa10.73□□□□□ -0.69
ATG4C-204ENST00000414558 PCBP4P57723 403 aaKnown RBP10.73□□□□□ -0.69
ATG4C-204ENST00000414558 SPEM2Q0P670 501 aa10.73□□□□□ -0.69
ATG4C-204ENST00000414558 FKBP5Q13451 457 aaPredicted RBP10.73□□□□□ -0.69
ATG4C-204ENST00000414558 OCLNQ16625 522 aa10.73□□□□□ -0.69
ATG4C-204ENST00000414558 MYO19Q96H55 970 aa10.73□□□□□ -0.69
ATG4C-204ENST00000414558 KLF15Q9UIH9 416 aa10.73□□□□□ -0.69
ATG4C-204ENST00000414558 RASSF7Q02833 373 aa10.72□□□□□ -0.69
ATG4C-204ENST00000414558 DGKZQ13574 1117 aa10.72□□□□□ -0.69
ATG4C-204ENST00000414558 SYT9Q86SS6 491 aa10.72□□□□□ -0.69
ATG4C-204ENST00000414558 FCHSD1Q86WN1 690 aa10.72□□□□□ -0.69
ATG4C-204ENST00000414558 C1orf115Q9H7X2 142 aa10.72□□□□□ -0.69
ATG4C-204ENST00000414558 RRAGCQ9HB90 399 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms