RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 HYPKQ9NX55 129 aa18.99■□□□□ 0.63
CHD1-202ENST00000414220 PDZRN3Q9UPQ7 1066 aa18.99■□□□□ 0.63
CHD1-202ENST00000414220 NIP7Q9Y221 180 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHD1-202ENST00000414220 ELL2O00472 640 aaPredicted RBP18.98■□□□□ 0.63
CHD1-202ENST00000414220 GTF2E1P29083 439 aaPredicted RBP18.98■□□□□ 0.63
CHD1-202ENST00000414220 ST5P78524 1137 aa18.98■□□□□ 0.63
CHD1-202ENST00000414220 GOLGA2Q08379 1002 aa18.98■□□□□ 0.63
CHD1-202ENST00000414220 CCDC30Q5VVM6 783 aa18.98■□□□□ 0.63
CHD1-202ENST00000414220 TPTE2Q6XPS3 522 aa18.98■□□□□ 0.63
CHD1-202ENST00000414220 NBPF5PQ86XG9 351 aaPredicted RBP18.98■□□□□ 0.63
CHD1-202ENST00000414220 C10orf71Q711Q0 1435 aa18.98■□□□□ 0.63
CHD1-202ENST00000414220 HSP90AB3PQ58FF7 597 aa18.97■□□□□ 0.63
CHD1-202ENST00000414220 TTLL7Q6ZT98 887 aa18.97■□□□□ 0.63
CHD1-202ENST00000414220 CNBD1Q8NA66 436 aa18.97■□□□□ 0.63
CHD1-202ENST00000414220 TSR2Q969E8 191 aaKnown RBP18.97■□□□□ 0.63
CHD1-202ENST00000414220 CHPF2Q9P2E5 772 aa18.97■□□□□ 0.63
CHD1-202ENST00000414220 AIMP1Q12904 312 aaKnown RBP18.96■□□□□ 0.63
CHD1-202ENST00000414220 PDIA6Q15084 440 aa18.96■□□□□ 0.63
CHD1-202ENST00000414220 COPS6Q7L5N1 327 aa18.96■□□□□ 0.63
CHD1-202ENST00000414220 STK31Q9BXU1 1019 aa18.96■□□□□ 0.63
CHD1-202ENST00000414220 NYXQ9GZU5 481 aa18.96■□□□□ 0.63
CHD1-202ENST00000414220 ZBTB3Q9H5J0 574 aa18.96■□□□□ 0.63
CHD1-202ENST00000414220 A0A0G2JLW4 131 aa18.95■□□□□ 0.62
CHD1-202ENST00000414220 DPEP1P16444 411 aa18.95■□□□□ 0.62
CHD1-202ENST00000414220 PDE6BP35913 854 aa18.95■□□□□ 0.62
CHD1-202ENST00000414220 C8orf58Q8NAV2 365 aa18.95■□□□□ 0.62
CHD1-202ENST00000414220 XAGE3Q8WTP9 111 aa18.95■□□□□ 0.62
CHD1-202ENST00000414220 BRIP1Q9BX63 1249 aa18.95■□□□□ 0.62
CHD1-202ENST00000414220 PIM2Q9P1W9 311 aa18.95■□□□□ 0.62
CHD1-202ENST00000414220 H0YIN7 160 aa18.94■□□□□ 0.62
CHD1-202ENST00000414220 ANXA1P04083 346 aa18.94■□□□□ 0.62
CHD1-202ENST00000414220 HLFQ16534 295 aa18.94■□□□□ 0.62
CHD1-202ENST00000414220 TWISTNBQ3B726 338 aaPredicted RBP18.94■□□□□ 0.62
CHD1-202ENST00000414220 GIGYF2Q6Y7W6 1299 aaKnown RBP18.94■□□□□ 0.62
CHD1-202ENST00000414220 MIER1Q8N108 512 aa18.94■□□□□ 0.62
CHD1-202ENST00000414220 SCN7AQ01118 1682 aa18.93■□□□□ 0.62
CHD1-202ENST00000414220 PROSER3Q2NL68 480 aa18.93■□□□□ 0.62
CHD1-202ENST00000414220 PRR5LQ6MZQ0 368 aa18.93■□□□□ 0.62
CHD1-202ENST00000414220 DDX58O95786 925 aaKnown RBP18.92■□□□□ 0.62
CHD1-202ENST00000414220 PARP10Q53GL7 1025 aa18.92■□□□□ 0.62
CHD1-202ENST00000414220 ANKRD13DQ6ZTN6 518 aa18.92■□□□□ 0.62
CHD1-202ENST00000414220 PPP1R42Q7Z4L9 355 aa18.92■□□□□ 0.62
CHD1-202ENST00000414220 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
CHD1-202ENST00000414220 FANCIQ9NVI1 1328 aa18.92■□□□□ 0.62
CHD1-202ENST00000414220 FAM177BA6PVY3 158 aa18.91■□□□□ 0.62
CHD1-202ENST00000414220 DALRD3Q5D0E6 543 aaKnown RBP18.91■□□□□ 0.62
CHD1-202ENST00000414220 LRP10Q7Z4F1 713 aa18.91■□□□□ 0.62
CHD1-202ENST00000414220 C2CD5Q86YS7 1000 aa18.91■□□□□ 0.62
CHD1-202ENST00000414220 PLBD2Q8NHP8 589 aa18.91■□□□□ 0.62
CHD1-202ENST00000414220 PXDNLA1KZ92 1463 aa18.9■□□□□ 0.62
CHD1-202ENST00000414220 GPTP24298 496 aa18.9■□□□□ 0.62
CHD1-202ENST00000414220 RIC3Q7Z5B4 369 aa18.9■□□□□ 0.62
CHD1-202ENST00000414220 ATP10DQ9P241 1426 aa18.9■□□□□ 0.62
CHD1-202ENST00000414220 E9PSI1 815 aa18.89■□□□□ 0.61
CHD1-202ENST00000414220 CHRNA5P30532 468 aa18.89■□□□□ 0.61
CHD1-202ENST00000414220 TCIRG1Q13488 830 aa18.89■□□□□ 0.61
CHD1-202ENST00000414220 ZNF34Q8IZ26 560 aa18.89■□□□□ 0.61
CHD1-202ENST00000414220 TSPYL6Q8N831 410 aa18.89■□□□□ 0.61
CHD1-202ENST00000414220 WWC3Q9ULE0 1092 aa18.89■□□□□ 0.61
CHD1-202ENST00000414220 BCORQ6W2J9 1755 aa18.88■□□□□ 0.61
CHD1-202ENST00000414220 YBX3P16989 372 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHD1-202ENST00000414220 EXOSC9Q06265 439 aaKnown RBP18.88■□□□□ 0.61
CHD1-202ENST00000414220 YY1P25490 414 aa18.87■□□□□ 0.61
CHD1-202ENST00000414220 TTLL6Q8N841 843 aa18.87■□□□□ 0.61
CHD1-202ENST00000414220 ZNF622Q969S3 477 aaKnown RBP eCLIP18.87■□□□□ 0.614e-9■■■■■ 36.8
CHD1-202ENST00000414220 UTP14AQ9BVJ6 771 aaKnown RBP18.87■□□□□ 0.61
CHD1-202ENST00000414220 KIF13BQ9NQT8 1826 aa18.87■□□□□ 0.61
CHD1-202ENST00000414220 RNF123Q5XPI4 1314 aa18.86■□□□□ 0.61
CHD1-202ENST00000414220 ZNF521Q96K83 1311 aa18.86■□□□□ 0.61
CHD1-202ENST00000414220 KCNA3P22001 575 aa18.86■□□□□ 0.61
CHD1-202ENST00000414220 CCDC24Q8N4L8 307 aa18.86■□□□□ 0.61
CHD1-202ENST00000414220 CNKSR1Q969H4 720 aa18.86■□□□□ 0.61
CHD1-202ENST00000414220 IBTKQ9P2D0 1353 aaPredicted RBP18.85■□□□□ 0.61
CHD1-202ENST00000414220 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
CHD1-202ENST00000414220 SUSD4Q5VX71 490 aa18.85■□□□□ 0.61
CHD1-202ENST00000414220 MASTLQ96GX5 879 aa18.85■□□□□ 0.61
CHD1-202ENST00000414220 NRXN2Q9P2S2 1712 aa18.85■□□□□ 0.61
CHD1-202ENST00000414220 VAMP4O75379 141 aa18.84■□□□□ 0.61
CHD1-202ENST00000414220 ARHGAP27Q6ZUM4 889 aa18.84■□□□□ 0.61
CHD1-202ENST00000414220 PHAXQ9H814 394 aaKnown RBP18.84■□□□□ 0.61
CHD1-202ENST00000414220 AFDNP55196 1824 aaKnown RBP18.84■□□□□ 0.61
CHD1-202ENST00000414220 UBN2Q6ZU65 1347 aa18.83■□□□□ 0.61
CHD1-202ENST00000414220 STYK1Q6J9G0 422 aa18.83■□□□□ 0.6
CHD1-202ENST00000414220 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.6
CHD1-202ENST00000414220 TRMT112Q9UI30 125 aaKnown RBP18.83■□□□□ 0.6
CHD1-202ENST00000414220 HSP90B1P14625 803 aaKnown RBP18.82■□□□□ 0.6
CHD1-202ENST00000414220 NPR1P16066 1061 aa18.82■□□□□ 0.6
CHD1-202ENST00000414220 ALDH1B1P30837 517 aa18.82■□□□□ 0.6
CHD1-202ENST00000414220 NEXNQ0ZGT2 675 aa18.82■□□□□ 0.6
CHD1-202ENST00000414220 ERFEQ4G0M1 354 aa18.82■□□□□ 0.6
CHD1-202ENST00000414220 NLRP10Q86W26 655 aa18.82■□□□□ 0.6
CHD1-202ENST00000414220 NUTM1Q86Y26 1132 aa18.82■□□□□ 0.6
CHD1-202ENST00000414220 NLRP3Q96P20 1036 aa18.82■□□□□ 0.6
CHD1-202ENST00000414220 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
CHD1-202ENST00000414220 NTSR2O95665 410 aa18.81■□□□□ 0.6
CHD1-202ENST00000414220 SRGNP10124 158 aa18.81■□□□□ 0.6
CHD1-202ENST00000414220 SLFN5Q08AF3 891 aa18.81■□□□□ 0.6
CHD1-202ENST00000414220 KSR2Q6VAB6 950 aa18.81■□□□□ 0.6
CHD1-202ENST00000414220 RPGRQ92834 1020 aaKnown RBP18.81■□□□□ 0.6
CHD1-202ENST00000414220 NUP98P52948 1817 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms